RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 TBC1D7Q9P0N9 293 aa10.58□□□□□ -0.72
RNF4-221ENST00000513643 USP25Q9UHP3 1055 aa10.58□□□□□ -0.72
RNF4-221ENST00000513643 SERTAD1Q9UHV2 236 aa10.58□□□□□ -0.72
RNF4-221ENST00000513643 DERAQ9Y315 318 aa10.58□□□□□ -0.72
RNF4-221ENST00000513643 USP15Q9Y4E8 981 aaPredicted RBP10.58□□□□□ -0.72
RNF4-221ENST00000513643 ANO9A1A5B4 782 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 LOC730098B7Z3J9 87 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 M0QZQ0 153 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 PODXLO00592 558 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 EIF3DO15371 548 aaKnown RBP eCLIP10.57□□□□□ -0.72
RNF4-221ENST00000513643 TGFB1I1O43294 461 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 PRPF6O94906 941 aaKnown RBP10.57□□□□□ -0.72
RNF4-221ENST00000513643 GCNT3O95395 438 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 MYL1P05976 194 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 HARSP12081 509 aaKnown RBP10.57□□□□□ -0.72
RNF4-221ENST00000513643 CASP1P29466 404 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 NDUFA8P51970 172 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 WNT7BP56706 349 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 ITIH3Q06033 890 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 CLUL1Q15846 466 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 FAM171A1Q5VUB5 890 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 RSPO2Q6UXX9 243 aaPredicted RBP10.57□□□□□ -0.72
RNF4-221ENST00000513643 TMEM130Q8N3G9 435 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 ZSWIM2Q8NEG5 633 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 CMASQ8NFW8 434 aaPredicted RBP10.57□□□□□ -0.72
RNF4-221ENST00000513643 CXorf38Q8TB03 319 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 FEZF2Q8TBJ5 459 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 SCFD1Q8WVM8 642 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 FBXL18Q96ME1 805 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 GOLPH3LQ9H4A5 285 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 TMEM206Q9H813 350 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 RPF1Q9H9Y2 349 aaKnown RBP10.57□□□□□ -0.72
RNF4-221ENST00000513643 DZANK1Q9NVP4 752 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 MTRRQ9UBK8 725 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 TUBGCP4Q9UGJ1 667 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 AGO2Q9UKV8 859 aaKnown RBP10.57□□□□□ -0.72
RNF4-221ENST00000513643 EXOC7Q9UPT5 735 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 FAM50BQ9Y247 325 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 C2CD2Q9Y426 696 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 BACE2Q9Y5Z0 518 aa10.57□□□□□ -0.72
RNF4-221ENST00000513643 PIRO00625 290 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 SYN3O14994 580 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 ADAM12O43184 909 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 ADH1AP07327 375 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 SRGAP2BP0DMP2 458 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 KLRC2P26717 231 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 BRCC3P46736 316 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 ACOT2P49753 483 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 SNRPFP62306 86 aaKnown RBP10.56□□□□□ -0.72
RNF4-221ENST00000513643 ASIC1P78348 528 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 CREMQ03060 361 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 RAB33AQ14088 237 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 TPRNQ4KMQ1 711 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 FAM26FQ5R3K3 315 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 SLC8B1Q6J4K2 584 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 LLGL2Q6P1M3 1020 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 PDXDC1Q6P996 788 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 CYP26C1Q6V0L0 522 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 EP400NLQ6ZTU2 488 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 GPR149Q86SP6 731 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 GRAMD1CQ8IYS0 662 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 GJD3Q8N144 294 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 ENGASEQ8NFI3 743 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 HASPINQ8TF76 798 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 RIN2Q8WYP3 895 aaPredicted RBP10.56□□□□□ -0.72
RNF4-221ENST00000513643 KHSRPQ92945 711 aaKnown RBP eCLIP10.56□□□□□ -0.72
RNF4-221ENST00000513643 BORCS6Q96GS4 357 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 SUSD3Q96L08 255 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 CBWD1Q9BRT8 395 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 PHF7Q9BWX1 381 aaPredicted RBP10.56□□□□□ -0.72
RNF4-221ENST00000513643 BLZF1Q9H2G9 400 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 UBQLN1Q9UMX0 589 aaKnown RBP10.56□□□□□ -0.72
RNF4-221ENST00000513643 CITO14578 2027 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 TCHHQ07283 1943 aa10.56□□□□□ -0.72
RNF4-221ENST00000513643 VWA8A3KMH1 1905 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 C2CD2LO14523 706 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 KIAA0391O15091 583 aaKnown RBP10.55□□□□□ -0.72
RNF4-221ENST00000513643 TGM5O43548 720 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 TRAPPC3O43617 180 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 EXTL3O43909 919 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 OAZ2O95190 189 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 NFICP08651 508 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 PAX3P23760 479 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 TKTP29401 623 aaKnown RBP10.55□□□□□ -0.72
RNF4-221ENST00000513643 AFMP43652 599 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 MCCD1P59942 119 aaPredicted RBP10.55□□□□□ -0.72
RNF4-221ENST00000513643 PPP2R3AQ06190 1150 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 SPAG1Q07617 926 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 STK4Q13043 487 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 SNW1Q13573 536 aaKnown RBP10.55□□□□□ -0.72
RNF4-221ENST00000513643 JADE1Q6IE81 842 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 KIAA1841Q6NSI8 718 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 KANK3Q6NY19 840 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 PRSS55Q6UWB4 352 aaPredicted RBP10.55□□□□□ -0.72
RNF4-221ENST00000513643 C15orf39Q6ZRI6 1047 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 NT5DC4Q86YG4 428 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 BRSK2Q8IWQ3 736 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 C12orf56Q8IXR9 622 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 EFCAB13Q8IY85 973 aa10.55□□□□□ -0.72
RNF4-221ENST00000513643 C12orf76Q8N812 135 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms