RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 ZNF263O14978 683 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 TRAPPC3O43617 180 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 CCNT1O60563 726 aaKnown RBP12.08□□□□□ -0.48
DDX41-216ENST00000513562 MOSPD3O75425 235 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 ZNF806P0C7X5 589 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 HOXB3P14651 431 aaPredicted RBP12.08□□□□□ -0.48
DDX41-216ENST00000513562 ATF2P15336 505 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 RPS6KB1P23443 525 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 ELF1P32519 619 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 VIPR2P41587 438 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 CLCNKBP51801 687 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 UPP1Q16831 310 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 BMP2KLQ5H9B9 411 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 WDR44Q5JSH3 913 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 HEATR6Q6AI08 1181 aaKnown RBP12.08□□□□□ -0.48
DDX41-216ENST00000513562 Q6ZS52 159 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 CEP68Q76N32 757 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 WDR5BQ86VZ2 330 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 POTEDQ86YR6 584 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 MFSD6LQ8IWD5 586 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 TCEAL8Q8IYN2 117 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 C12orf50Q8NA57 414 aaPredicted RBP12.08□□□□□ -0.48
DDX41-216ENST00000513562 C3orf58Q8NDZ4 430 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 LOXL4Q96JB6 756 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 UROC1Q96N76 676 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 AIFM3Q96NN9 605 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 PPP1R10Q96QC0 940 aaKnown RBP12.08□□□□□ -0.48
DDX41-216ENST00000513562 HSD17B14Q9BPX1 270 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 EIF2AK1Q9BQI3 630 aaKnown RBP12.08□□□□□ -0.48
DDX41-216ENST00000513562 RBM12Q9NTZ6 932 aaKnown RBP12.08□□□□□ -0.48
DDX41-216ENST00000513562 C2orf42Q9NWW7 574 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 INSL5Q9Y5Q6 135 aa12.08□□□□□ -0.48
DDX41-216ENST00000513562 WDFY3Q8IZQ1 3526 aa12.07□□□□□ -0.48
DDX41-216ENST00000513562 I3L4J1 428 aa12.07□□□□□ -0.48
DDX41-216ENST00000513562 MARCH6O60337 910 aa12.07□□□□□ -0.48
DDX41-216ENST00000513562 EPN2O95208 641 aa12.07□□□□□ -0.48
DDX41-216ENST00000513562 KCNK5O95279 499 aa12.07□□□□□ -0.48
DDX41-216ENST00000513562 EPHA5P54756 1037 aa12.07□□□□□ -0.48
DDX41-216ENST00000513562 ACAP1Q15027 740 aa12.07□□□□□ -0.48
DDX41-216ENST00000513562 CYP4A22Q5TCH4 519 aa12.07□□□□□ -0.48
DDX41-216ENST00000513562 STPG1Q5TH74 334 aa12.07□□□□□ -0.48
DDX41-216ENST00000513562 NOSTRINQ8IVI9 506 aa12.07□□□□□ -0.48
DDX41-216ENST00000513562 ZBTB8OSQ8IWT0 167 aa12.07□□□□□ -0.48
DDX41-216ENST00000513562 SLFN12Q8IYM2 578 aa12.07□□□□□ -0.48
DDX41-216ENST00000513562 ZSCAN18Q8TBC5 510 aaPredicted RBP12.07□□□□□ -0.48
DDX41-216ENST00000513562 DOCK6Q96HP0 2047 aa12.07□□□□□ -0.48
DDX41-216ENST00000513562 NAP1L4Q99733 375 aaKnown RBP12.07□□□□□ -0.48
DDX41-216ENST00000513562 LSM14BQ9BX40 385 aaKnown RBP12.07□□□□□ -0.48
DDX41-216ENST00000513562 ARRDC1-AS1Q9H2J1 176 aa12.07□□□□□ -0.48
DDX41-216ENST00000513562 C8orf33Q9H7E9 229 aaPredicted RBP12.07□□□□□ -0.48
DDX41-216ENST00000513562 CYP4F11Q9HBI6 524 aa12.07□□□□□ -0.48
DDX41-216ENST00000513562 GPRC5CQ9NQ84 441 aa12.07□□□□□ -0.48
DDX41-216ENST00000513562 KCNJ14Q9UNX9 436 aa12.07□□□□□ -0.48
DDX41-216ENST00000513562 SNX14Q9Y5W7 946 aa12.07□□□□□ -0.48
DDX41-216ENST00000513562 FAM208BQ5VWN6 2430 aa12.07□□□□□ -0.48
DDX41-216ENST00000513562 SLC38A8A6NNN8 435 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 HEPACAM2A8MVW5 462 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 C1QTNF9BB2RNN3 333 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 AXIN1O15169 862 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 USO1O60763 962 aaKnown RBP12.06□□□□□ -0.48
DDX41-216ENST00000513562 SEC24AO95486 1093 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 PRKCBP05771 671 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 C1QTNF9P0C862 333 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 HOXC13P31276 330 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 BRCC3P46736 316 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 RAP1GAPP47736 663 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 FCHO2Q0JRZ9 810 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 PRPF4BQ13523 1007 aaKnown RBP12.06□□□□□ -0.48
DDX41-216ENST00000513562 CCDC6Q16204 474 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 GLRA4Q5JXX5 417 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 DGKKQ5KSL6 1271 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 PLA2G2CQ5R387 149 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 TPGS2Q68CL5 300 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 TXNDC11Q6PKC3 985 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 UNQ6494/PRO21346Q6UXR6 183 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 HS6ST3Q8IZP7 471 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 KDF1Q8NAX2 398 aaPredicted RBP12.06□□□□□ -0.48
DDX41-216ENST00000513562 LEMD2Q8NC56 503 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 CSGALNACT1Q8TDX6 532 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 E2F7Q96AV8 911 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 RSPRY1Q96DX4 576 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 CCDC43Q96MW1 224 aaKnown RBP12.06□□□□□ -0.48
DDX41-216ENST00000513562 ADPGKQ9BRR6 497 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 C2orf40Q9H1Z8 148 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 GOLGA2P5Q9HBQ8 144 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 ZMIZ1Q9ULJ6 1067 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 GDAQ9Y2T3 454 aa12.06□□□□□ -0.48
DDX41-216ENST00000513562 ARID2Q68CP9 1835 aa12.05□□□□□ -0.48
DDX41-216ENST00000513562 MYBPHLA2RUH7 354 aa12.05□□□□□ -0.48
DDX41-216ENST00000513562 SPECC1L-ADORA2AF8WAN1 911 aa12.05□□□□□ -0.48
DDX41-216ENST00000513562 ACKR2O00590 384 aa12.05□□□□□ -0.48
DDX41-216ENST00000513562 CHADO15335 359 aa12.05□□□□□ -0.48
DDX41-216ENST00000513562 BAG4O95429 457 aaKnown RBP12.05□□□□□ -0.48
DDX41-216ENST00000513562 EDN1P05305 212 aa12.05□□□□□ -0.48
DDX41-216ENST00000513562 CTHP32929 405 aa12.05□□□□□ -0.48
DDX41-216ENST00000513562 HSPA4P34932 840 aa12.05□□□□□ -0.48
DDX41-216ENST00000513562 SOX9P48436 509 aa12.05□□□□□ -0.48
DDX41-216ENST00000513562 KPNA1P52294 538 aaPredicted RBP12.05□□□□□ -0.48
DDX41-216ENST00000513562 CCINQ13939 588 aa12.05□□□□□ -0.48
DDX41-216ENST00000513562 MAPK6Q16659 721 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms