RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 FBXO4Q9UKT5 387 aa12.02□□□□□ -0.49
SKP2-207ENST00000513263 MRPS23Q9Y3D9 190 aaKnown RBP12.02□□□□□ -0.49
SKP2-207ENST00000513263 TSC2P49815 1807 aa12.02□□□□□ -0.49
SKP2-207ENST00000513263 ANK1P16157 1881 aa12.02□□□□□ -0.49
SKP2-207ENST00000513263 ZNF638Q14966 1978 aaKnown RBP12.01□□□□□ -0.49
SKP2-207ENST00000513263 SMIM28A0A1B0GU29 152 aa12.01□□□□□ -0.49
SKP2-207ENST00000513263 TTLL13PA6NNM8 815 aa12.01□□□□□ -0.49
SKP2-207ENST00000513263 PODXLO00592 558 aa12.01□□□□□ -0.49
SKP2-207ENST00000513263 PRRG1O14668 218 aa12.01□□□□□ -0.49
SKP2-207ENST00000513263 KINO60870 393 aaKnown RBP12.01□□□□□ -0.49
SKP2-207ENST00000513263 TOM1L1O75674 476 aa12.01□□□□□ -0.49
SKP2-207ENST00000513263 ATF2P15336 505 aa12.01□□□□□ -0.49
SKP2-207ENST00000513263 PTPN2P17706 415 aa12.01□□□□□ -0.49
SKP2-207ENST00000513263 PAX3P23760 479 aa12.01□□□□□ -0.49
SKP2-207ENST00000513263 GUCY2CP25092 1073 aa12.01□□□□□ -0.49
SKP2-207ENST00000513263 ST3GAL1Q11201 340 aa12.01□□□□□ -0.49
SKP2-207ENST00000513263 PLD1Q13393 1074 aa12.01□□□□□ -0.49
SKP2-207ENST00000513263 PPP2R5DQ14738 602 aa12.01□□□□□ -0.49
SKP2-207ENST00000513263 NT5DC1Q5TFE4 455 aa12.01□□□□□ -0.49
SKP2-207ENST00000513263 EEF1DP3Q658K8 133 aa12.01□□□□□ -0.49
SKP2-207ENST00000513263 ZPBP2Q6X784 338 aa12.01□□□□□ -0.49
SKP2-207ENST00000513263 NPAS3Q8IXF0 933 aa12.01□□□□□ -0.49
SKP2-207ENST00000513263 TCEAL8Q8IYN2 117 aa12.01□□□□□ -0.49
SKP2-207ENST00000513263 FEZF2Q8TBJ5 459 aa12.01□□□□□ -0.49
SKP2-207ENST00000513263 SPIRE2Q8WWL2 714 aa12.01□□□□□ -0.49
SKP2-207ENST00000513263 RABGGTAQ92696 567 aa12.01□□□□□ -0.49
SKP2-207ENST00000513263 SECISBP2LQ93073 1101 aaKnown RBP12.01□□□□□ -0.49
SKP2-207ENST00000513263 CDK5RAP3Q96JB5 506 aa12.01□□□□□ -0.49
SKP2-207ENST00000513263 TSPAN18Q96SJ8 248 aa12.01□□□□□ -0.49
SKP2-207ENST00000513263 DDX23Q9BUQ8 820 aaKnown RBP12.01□□□□□ -0.49
SKP2-207ENST00000513263 CDT1Q9H211 546 aa12.01□□□□□ -0.49
SKP2-207ENST00000513263 LARSQ9P2J5 1176 aaKnown RBP12.01□□□□□ -0.49
SKP2-207ENST00000513263 COL4A2P08572 1712 aa12□□□□□ -0.49
SKP2-207ENST00000513263 DENND4CQ5VZ89 1909 aa12□□□□□ -0.49
SKP2-207ENST00000513263 RALGAPA1Q6GYQ0 2036 aa12□□□□□ -0.49
SKP2-207ENST00000513263 A0A087WWV3 80 aa12□□□□□ -0.49
SKP2-207ENST00000513263 HIP1RO75146 1068 aa12□□□□□ -0.49
SKP2-207ENST00000513263 MYBP10242 640 aa12□□□□□ -0.49
SKP2-207ENST00000513263 PROZP22891 400 aa12□□□□□ -0.49
SKP2-207ENST00000513263 TKTP29401 623 aaKnown RBP12□□□□□ -0.49
SKP2-207ENST00000513263 ID4P47928 161 aa12□□□□□ -0.49
SKP2-207ENST00000513263 ROR1Q01973 937 aa12□□□□□ -0.49
SKP2-207ENST00000513263 SPECC1Q5M775 1068 aa12□□□□□ -0.49
SKP2-207ENST00000513263 VARS2Q5ST30 1063 aaKnown RBP12□□□□□ -0.49
SKP2-207ENST00000513263 IQCEQ6IPM2 695 aa12□□□□□ -0.49
SKP2-207ENST00000513263 PARM1Q6UWI2 310 aa12□□□□□ -0.49
SKP2-207ENST00000513263 ALKAL1Q6UXT8 129 aa12□□□□□ -0.49
SKP2-207ENST00000513263 PDZD4Q76G19 769 aaPredicted RBP12□□□□□ -0.49
SKP2-207ENST00000513263 GPR161Q8N6U8 529 aaKnown RBP12□□□□□ -0.49
SKP2-207ENST00000513263 KCNN1Q92952 543 aa12□□□□□ -0.49
SKP2-207ENST00000513263 ELSPBP1Q96BH3 223 aa12□□□□□ -0.49
SKP2-207ENST00000513263 MSANTD3Q96H12 275 aa12□□□□□ -0.49
SKP2-207ENST00000513263 AK8Q96MA6 479 aa12□□□□□ -0.49
SKP2-207ENST00000513263 HINFPQ9BQA5 517 aa12□□□□□ -0.49
SKP2-207ENST00000513263 FAM126AQ9BYI3 521 aaPredicted RBP12□□□□□ -0.49
SKP2-207ENST00000513263 PLEKHA5Q9HAU0 1116 aa12□□□□□ -0.49
SKP2-207ENST00000513263 PTPRHQ9HD43 1115 aa12□□□□□ -0.49
SKP2-207ENST00000513263 DLGAP2Q9P1A6 1054 aa12□□□□□ -0.49
SKP2-207ENST00000513263 CACNG4Q9UBN1 327 aa12□□□□□ -0.49
SKP2-207ENST00000513263 PCDHGA2Q9Y5H1 932 aa12□□□□□ -0.49
SKP2-207ENST00000513263 SPAG17Q6Q759 2223 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 CLDN3O15551 220 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 LAMTOR5O43504 91 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 DTNBO60941 627 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 ABLIM3O94929 683 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 EDN1P05305 212 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 DCNP07585 359 aaKnown RBP11.99□□□□□ -0.49
SKP2-207ENST00000513263 RHOP08100 348 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 SDHBP21912 280 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 MCM4P33991 863 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 RPS9P46781 194 aaKnown RBP11.99□□□□□ -0.49
SKP2-207ENST00000513263 GPC5P78333 572 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 UBXN2BQ14CS0 331 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 ZBTB41Q5SVQ8 909 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 CYP4A22Q5TCH4 519 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 ARL6IP4Q66PJ3 421 aaKnown RBP11.99□□□□□ -0.49
SKP2-207ENST00000513263 RINT1Q6NUQ1 792 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 ZNF852Q6ZMS4 543 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 C4orf32Q8N8J7 132 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 DEPDC1BQ8WUY9 529 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 RUBCNQ92622 972 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 IRF7Q92985 503 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 E2F7Q96AV8 911 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 SUSD3Q96L08 255 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 NTPCRQ9BSD7 190 aaKnown RBP11.99□□□□□ -0.49
SKP2-207ENST00000513263 GPR88Q9GZN0 384 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 ANKFY1Q9P2R3 1169 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 ODF2LQ9ULJ1 636 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 INSL5Q9Y5Q6 135 aa11.99□□□□□ -0.49
SKP2-207ENST00000513263 WDR27A2RRH5 827 aa11.98□□□□□ -0.49
SKP2-207ENST00000513263 MAN2B1O00754 1011 aa11.98□□□□□ -0.49
SKP2-207ENST00000513263 ADAM12O43184 909 aa11.98□□□□□ -0.49
SKP2-207ENST00000513263 BMP15O95972 392 aa11.98□□□□□ -0.49
SKP2-207ENST00000513263 SP9P0CG40 484 aa11.98□□□□□ -0.49
SKP2-207ENST00000513263 PLS3P13797 630 aa11.98□□□□□ -0.49
SKP2-207ENST00000513263 CYP3A5P20815 502 aa11.98□□□□□ -0.49
SKP2-207ENST00000513263 MARCKSP29966 332 aaPredicted RBP11.98□□□□□ -0.49
SKP2-207ENST00000513263 ATP2C1P98194 919 aaPredicted RBP11.98□□□□□ -0.49
SKP2-207ENST00000513263 PPP2R3AQ06190 1150 aa11.98□□□□□ -0.49
SKP2-207ENST00000513263 SNW1Q13573 536 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms