RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-231	ENST00000513098	ZBTB6	Q15916	424 aa		13.72	□□□□□ -0.21
UBE2D3-231	ENST00000513098	KYAT1	Q16773	422 aa		13.72	□□□□□ -0.21
UBE2D3-231	ENST00000513098	CWF19L1	Q69YN2	538 aa	Known RBP	13.72	□□□□□ -0.21
UBE2D3-231	ENST00000513098	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.72	□□□□□ -0.21
UBE2D3-231	ENST00000513098	RSAD2	Q8WXG1	361 aa		13.72	□□□□□ -0.21
UBE2D3-231	ENST00000513098	CALML4	Q96GE6	196 aa		13.72	□□□□□ -0.21
UBE2D3-231	ENST00000513098	PHOX2B	Q99453	314 aa		13.72	□□□□□ -0.21
UBE2D3-231	ENST00000513098	GOLGA2P5	Q9HBQ8	144 aa		13.72	□□□□□ -0.21
UBE2D3-231	ENST00000513098	BLOC1S4	Q9NUP1	217 aa		13.72	□□□□□ -0.21
UBE2D3-231	ENST00000513098	CDH7	Q9ULB5	785 aa		13.72	□□□□□ -0.21
UBE2D3-231	ENST00000513098	MAFF	Q9ULX9	164 aa		13.72	□□□□□ -0.21
UBE2D3-231	ENST00000513098	CDY1	Q9Y6F8	540 aa		13.72	□□□□□ -0.21
UBE2D3-231	ENST00000513098	NOTCH4	Q99466	2003 aa		13.72	□□□□□ -0.21
UBE2D3-231	ENST00000513098	TTC26	A0AVF1	554 aa		13.71	□□□□□ -0.21
UBE2D3-231	ENST00000513098		H7C4K7	107 aa		13.71	□□□□□ -0.21
UBE2D3-231	ENST00000513098	NARS	O43776	548 aa	Known RBP	13.71	□□□□□ -0.21
UBE2D3-231	ENST00000513098	PIGR	P01833	764 aa		13.71	□□□□□ -0.21
UBE2D3-231	ENST00000513098	CLTA	P09496	248 aa		13.71	□□□□□ -0.21
UBE2D3-231	ENST00000513098	ABCD1	P33897	745 aa		13.71	□□□□□ -0.21
UBE2D3-231	ENST00000513098	BRCC3	P46736	316 aa		13.71	□□□□□ -0.21
UBE2D3-231	ENST00000513098	RAD51AP2	Q09MP3	1159 aa		13.71	□□□□□ -0.21
UBE2D3-231	ENST00000513098	VARS2	Q5ST30	1063 aa	Known RBP	13.71	□□□□□ -0.21
UBE2D3-231	ENST00000513098	PHLDB3	Q6NSJ2	640 aa		13.71	□□□□□ -0.21
UBE2D3-231	ENST00000513098	HAUS6	Q7Z4H7	955 aa		13.71	□□□□□ -0.21
UBE2D3-231	ENST00000513098	TCEAL8	Q8IYN2	117 aa		13.71	□□□□□ -0.21
UBE2D3-231	ENST00000513098	SIX5	Q8N196	739 aa		13.71	□□□□□ -0.21
UBE2D3-231	ENST00000513098	SLC7A14	Q8TBB6	771 aa		13.71	□□□□□ -0.21
UBE2D3-231	ENST00000513098	ATOH1	Q92858	354 aa	Predicted RBP	13.71	□□□□□ -0.21
UBE2D3-231	ENST00000513098	FGF13	Q92913	245 aa		13.71	□□□□□ -0.21
UBE2D3-231	ENST00000513098	SUSD3	Q96L08	255 aa		13.71	□□□□□ -0.21
UBE2D3-231	ENST00000513098	PLIN2	Q99541	437 aa		13.71	□□□□□ -0.21
UBE2D3-231	ENST00000513098	CCSER1	Q9C0I3	900 aa		13.71	□□□□□ -0.21
UBE2D3-231	ENST00000513098	HAPLN2	Q9GZV7	340 aa		13.71	□□□□□ -0.21
UBE2D3-231	ENST00000513098	FBXL21	Q9UKT6	434 aa		13.71	□□□□□ -0.21
UBE2D3-231	ENST00000513098	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.7	□□□□□ -0.22
UBE2D3-231	ENST00000513098	KRBA1	A5PL33	1030 aa		13.7	□□□□□ -0.22
UBE2D3-231	ENST00000513098	PI15	O43692	258 aa		13.7	□□□□□ -0.22
UBE2D3-231	ENST00000513098	FAM189A1	O60320	539 aa		13.7	□□□□□ -0.22
UBE2D3-231	ENST00000513098	ATF2	P15336	505 aa		13.7	□□□□□ -0.22
UBE2D3-231	ENST00000513098	CYP3A5	P20815	502 aa		13.7	□□□□□ -0.22
UBE2D3-231	ENST00000513098	PDC	P20941	246 aa		13.7	□□□□□ -0.22
UBE2D3-231	ENST00000513098	LRPAP1	P30533	357 aa		13.7	□□□□□ -0.22
UBE2D3-231	ENST00000513098	DDIT3	P35638	169 aa		13.7	□□□□□ -0.22
UBE2D3-231	ENST00000513098	TPGS2	Q68CL5	300 aa		13.7	□□□□□ -0.22
UBE2D3-231	ENST00000513098	GET4	Q7L5D6	327 aa	Predicted RBP	13.7	□□□□□ -0.22
UBE2D3-231	ENST00000513098	LRRC15	Q8TF66	581 aa		13.7	□□□□□ -0.22
UBE2D3-231	ENST00000513098	C18orf25	Q96B23	403 aa	Predicted RBP	13.7	□□□□□ -0.22
UBE2D3-231	ENST00000513098	REEP2	Q9BRK0	252 aa		13.7	□□□□□ -0.22
UBE2D3-231	ENST00000513098	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.7	□□□□□ -0.22
UBE2D3-231	ENST00000513098	PARVG	Q9HBI0	331 aa		13.7	□□□□□ -0.22
UBE2D3-231	ENST00000513098	DNMT3B	Q9UBC3	853 aa	Known RBP	13.7	□□□□□ -0.22
UBE2D3-231	ENST00000513098	TBX20	Q9UMR3	447 aa		13.7	□□□□□ -0.22
UBE2D3-231	ENST00000513098	NUMBL	Q9Y6R0	609 aa		13.7	□□□□□ -0.22
UBE2D3-231	ENST00000513098		H0Y858	1186 aa		13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098		I3L4J1	428 aa		13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098		M0QZQ0	153 aa		13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098	CCL16	O15467	120 aa		13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098	MICAL2	O94851	1124 aa		13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098	OAZ2	O95190	189 aa		13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098	NBL1	P41271	181 aa		13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098	NTHL1	P78549	312 aa		13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098	GTF2B	Q00403	316 aa		13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098	POU5F1	Q01860	360 aa	Known RBP	13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098	ROR1	Q01973	937 aa		13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098	SF3A1	Q15459	793 aa	Known RBP	13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098	MTSS1L	Q765P7	747 aa		13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098	GPBP1	Q86WP2	473 aa		13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098	CCDC105	Q8IYK2	499 aa		13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098	APPL2	Q8NEU8	664 aa		13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098	FLCN	Q8NFG4	579 aa		13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098	RAD54L	Q92698	747 aa		13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098	FIZ1	Q96SL8	496 aa		13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098	ST6GALNAC4	Q9H4F1	302 aa		13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098	GDE1	Q9NZC3	331 aa		13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098	ANKFY1	Q9P2R3	1169 aa		13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098	NUB1	Q9Y5A7	615 aa		13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098	FAM186A	A6NE01	2351 aa		13.69	□□□□□ -0.22
UBE2D3-231	ENST00000513098	PDCD11	Q14690	1871 aa	Known RBP	13.68	□□□□□ -0.22
UBE2D3-231	ENST00000513098		A0A0B4J269	797 aa		13.68	□□□□□ -0.22
UBE2D3-231	ENST00000513098	WDR27	A2RRH5	827 aa		13.68	□□□□□ -0.22
UBE2D3-231	ENST00000513098	TRAK2	O60296	914 aa		13.68	□□□□□ -0.22
UBE2D3-231	ENST00000513098	CFH	P08603	1231 aa		13.68	□□□□□ -0.22
UBE2D3-231	ENST00000513098	PTPN2	P17706	415 aa		13.68	□□□□□ -0.22
UBE2D3-231	ENST00000513098	PLCG1	P19174	1290 aa		13.68	□□□□□ -0.22
UBE2D3-231	ENST00000513098	PAX3	P23760	479 aa		13.68	□□□□□ -0.22
UBE2D3-231	ENST00000513098	AARS	P49588	968 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
UBE2D3-231	ENST00000513098	STARD6	P59095	220 aa		13.68	□□□□□ -0.22
UBE2D3-231	ENST00000513098	GRIN1	Q05586	938 aa		13.68	□□□□□ -0.22
UBE2D3-231	ENST00000513098	PTPA	Q15257	358 aa		13.68	□□□□□ -0.22
UBE2D3-231	ENST00000513098	PABPC1L	Q4VXU2	614 aa	Known RBP	13.68	□□□□□ -0.22
UBE2D3-231	ENST00000513098	PARM1	Q6UWI2	310 aa		13.68	□□□□□ -0.22
UBE2D3-231	ENST00000513098	CD302	Q8IX05	232 aa		13.68	□□□□□ -0.22
UBE2D3-231	ENST00000513098	MYCT1	Q8N699	235 aa		13.68	□□□□□ -0.22
UBE2D3-231	ENST00000513098	DTWD2	Q8NBA8	298 aa		13.68	□□□□□ -0.22
UBE2D3-231	ENST00000513098	BEST2	Q8NFU1	509 aa		13.68	□□□□□ -0.22
UBE2D3-231	ENST00000513098	ITFG1	Q8TB96	612 aa		13.68	□□□□□ -0.22
UBE2D3-231	ENST00000513098	GPR152	Q8TDT2	470 aa		13.68	□□□□□ -0.22
UBE2D3-231	ENST00000513098	FGF14	Q92915	247 aa		13.68	□□□□□ -0.22
UBE2D3-231	ENST00000513098	RPP25	Q9BUL9	199 aa	Known RBP	13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms