RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 CBX8Q9HC52 389 aa7.78□□□□□ -1.16
RFC1-215ENST00000512881 NCOA5Q9HCD5 579 aaKnown RBP7.78□□□□□ -1.16
RFC1-215ENST00000512881 TBC1D22BQ9NU19 505 aa7.78□□□□□ -1.16
RFC1-215ENST00000512881 NCOR1O75376 2440 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 NID2Q14112 1375 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.77□□□□□ -1.17
RFC1-215ENST00000512881 SMIM35A0A1B0GVV1 85 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 H3BNC9 293 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 M0QZ92 97 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 GIPC1O14908 333 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 EPB41L2O43491 1005 aaKnown RBP7.77□□□□□ -1.17
RFC1-215ENST00000512881 HBP1O60381 514 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 CELA3AP09093 270 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 IFNAR1P17181 557 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 CIITAP33076 1130 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 GPM6BQ13491 265 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 PTPROQ16827 1216 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 CYP27C1Q4G0S4 372 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 PRR16Q569H4 304 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 ZNF484Q5JVG2 852 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 ZNF574Q6ZN55 896 aaPredicted RBP7.77□□□□□ -1.17
RFC1-215ENST00000512881 RUFY3Q7L099 469 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 RTN4RL1Q86UN2 441 aaPredicted RBP7.77□□□□□ -1.17
RFC1-215ENST00000512881 KRTAP1-3Q8IUG1 177 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 CCDC60Q8IWA6 550 aaPredicted RBP7.77□□□□□ -1.17
RFC1-215ENST00000512881 TP53INP2Q8IXH6 220 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 KIAA0319LQ8IZA0 1049 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 FIBCD1Q8N539 461 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 FAM181AQ8N9Y4 354 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 RASGRP4Q8TDF6 673 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 BCL7CQ8WUZ0 217 aaPredicted RBP7.77□□□□□ -1.17
RFC1-215ENST00000512881 MRPL38Q96DV4 380 aaKnown RBP7.77□□□□□ -1.17
RFC1-215ENST00000512881 DUSP23Q9BVJ7 150 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 RNF26Q9BY78 433 aaPredicted RBP7.77□□□□□ -1.17
RFC1-215ENST00000512881 CELF4Q9BZC1 486 aaKnown RBP7.77□□□□□ -1.17
RFC1-215ENST00000512881 CEP44Q9C0F1 390 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 ZNF302Q9NR11 478 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 PCOLCE2Q9UKZ9 415 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 PADI3Q9ULW8 664 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 TRPV2Q9Y5S1 764 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 CYP46A1Q9Y6A2 500 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 SQORQ9Y6N5 450 aa7.77□□□□□ -1.17
RFC1-215ENST00000512881 TRIP12Q14669 1992 aaPredicted RBP7.77□□□□□ -1.17
RFC1-215ENST00000512881 MYH6P13533 1939 aa7.76□□□□□ -1.17
RFC1-215ENST00000512881 EDIL3O43854 480 aa7.76□□□□□ -1.17
RFC1-215ENST00000512881 RB1P06400 928 aa7.76□□□□□ -1.17
RFC1-215ENST00000512881 USP17L7P0C7H9 530 aa7.76□□□□□ -1.17
RFC1-215ENST00000512881 BMPR1AP36894 532 aa7.76□□□□□ -1.17
RFC1-215ENST00000512881 NLRP5P59047 1200 aa7.76□□□□□ -1.17
RFC1-215ENST00000512881 SETQ01105 290 aaPredicted RBP7.76□□□□□ -1.17
RFC1-215ENST00000512881 SSRP1Q08945 709 aaKnown RBP7.76□□□□□ -1.17
RFC1-215ENST00000512881 PAK2Q13177 524 aa7.76□□□□□ -1.17
RFC1-215ENST00000512881 TOB2Q14106 344 aaPredicted RBP7.76□□□□□ -1.17
RFC1-215ENST00000512881 BTG3Q14201 252 aaPredicted RBP7.76□□□□□ -1.17
RFC1-215ENST00000512881 LCE3BQ5TA77 95 aa7.76□□□□□ -1.17
RFC1-215ENST00000512881 ZNF746Q6NUN9 644 aaPredicted RBP7.76□□□□□ -1.17
RFC1-215ENST00000512881 UBE3DQ7Z6J8 389 aa7.76□□□□□ -1.17
RFC1-215ENST00000512881 CKAP2LQ8IYA6 745 aa7.76□□□□□ -1.17
RFC1-215ENST00000512881 SMAP1Q8IYB5 467 aaPredicted RBP7.76□□□□□ -1.17
RFC1-215ENST00000512881 PLD6Q8N2A8 252 aaKnown RBP7.76□□□□□ -1.17
RFC1-215ENST00000512881 CCDC148Q8NFR7 591 aa7.76□□□□□ -1.17
RFC1-215ENST00000512881 LINC01599Q8WXQ3 324 aa7.76□□□□□ -1.17
RFC1-215ENST00000512881 ZNF689Q96CS4 500 aaPredicted RBP7.76□□□□□ -1.17
RFC1-215ENST00000512881 ZNF274Q96GC6 653 aaPredicted RBP7.76□□□□□ -1.17
RFC1-215ENST00000512881 FTHL17Q9BXU8 183 aa7.76□□□□□ -1.17
RFC1-215ENST00000512881 TM6SF1Q9BZW5 370 aa7.76□□□□□ -1.17
RFC1-215ENST00000512881 UBE2ZQ9H832 354 aaPredicted RBP7.76□□□□□ -1.17
RFC1-215ENST00000512881 RC3H2Q9HBD1 1191 aaKnown RBP7.76□□□□□ -1.17
RFC1-215ENST00000512881 SH3GLB2Q9NR46 395 aa7.76□□□□□ -1.17
RFC1-215ENST00000512881 VPS54Q9P1Q0 977 aa7.76□□□□□ -1.17
RFC1-215ENST00000512881 FAM8A1Q9UBU6 413 aa7.76□□□□□ -1.17
RFC1-215ENST00000512881 PCDHA10Q9Y5I2 948 aa7.76□□□□□ -1.17
RFC1-215ENST00000512881 IGSF9BQ9UPX0 1349 aa7.76□□□□□ -1.17
RFC1-215ENST00000512881 KDM3AQ9Y4C1 1321 aa7.76□□□□□ -1.17
RFC1-215ENST00000512881 C5orf67F2Z3F1 127 aa7.75□□□□□ -1.17
RFC1-215ENST00000512881 MSH4O15457 936 aa7.75□□□□□ -1.17
RFC1-215ENST00000512881 DGKIO75912 1065 aa7.75□□□□□ -1.17
RFC1-215ENST00000512881 LINC00271P0C7V0 271 aa7.75□□□□□ -1.17
RFC1-215ENST00000512881 KCNA5P22460 613 aa7.75□□□□□ -1.17
RFC1-215ENST00000512881 CTNNB1P35222 781 aa7.75□□□□□ -1.17
RFC1-215ENST00000512881 RING1Q06587 406 aa7.75□□□□□ -1.17
RFC1-215ENST00000512881 TMEM266Q2M3C6 531 aa7.75□□□□□ -1.17
RFC1-215ENST00000512881 LEXMQ3ZCV2 418 aa7.75□□□□□ -1.17
RFC1-215ENST00000512881 PPM1JQ5JR12 505 aa7.75□□□□□ -1.17
RFC1-215ENST00000512881 LLGL2Q6P1M3 1020 aa7.75□□□□□ -1.17
RFC1-215ENST00000512881 TRMT1LQ7Z2T5 733 aaKnown RBP7.75□□□□□ -1.17
RFC1-215ENST00000512881 LENG9Q96B70 501 aa7.75□□□□□ -1.17
RFC1-215ENST00000512881 UPF3BQ9BZI7 483 aaKnown RBP7.75□□□□□ -1.17
RFC1-215ENST00000512881 TMX1Q9H3N1 280 aa7.75□□□□□ -1.17
RFC1-215ENST00000512881 PDRG1Q9NUG6 133 aa7.75□□□□□ -1.17
RFC1-215ENST00000512881 GABBR1Q9UBS5 961 aa7.75□□□□□ -1.17
RFC1-215ENST00000512881 TCEAL9Q9UHQ7 104 aa7.75□□□□□ -1.17
RFC1-215ENST00000512881 GINS2Q9Y248 185 aa7.75□□□□□ -1.17
RFC1-215ENST00000512881 NOC2LQ9Y3T9 749 aaKnown RBP7.75□□□□□ -1.17
RFC1-215ENST00000512881 RWDD3Q9Y3V2 267 aa7.75□□□□□ -1.17
RFC1-215ENST00000512881 MYH7BA7E2Y1 1941 aa7.75□□□□□ -1.17
RFC1-215ENST00000512881 ADGRA3Q8IWK6 1321 aa7.75□□□□□ -1.17
RFC1-215ENST00000512881 TANC1Q9C0D5 1861 aa7.75□□□□□ -1.17
RFC1-215ENST00000512881 COL1A2P08123 1366 aa7.74□□□□□ -1.17
RFC1-215ENST00000512881 CPLX1O14810 134 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms