RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 CD4P01730 458 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 ODC1P11926 461 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 EIF4BP23588 611 aaKnown RBP9.38□□□□□ -0.91
VCAN-208ENST00000512590 MORC3Q14149 939 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 SCYL3Q8IZE3 742 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 SUSD6Q92537 303 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 FATE1Q969F0 183 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 MYCBPQ99417 103 aaPredicted RBP9.38□□□□□ -0.91
VCAN-208ENST00000512590 ZNRF3Q9ULT6 936 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 TBX22Q9Y458 520 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 SOWAHDA6NJG2 315 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 RBMXL2O75526 392 aaKnown RBP9.38□□□□□ -0.91
VCAN-208ENST00000512590 PARNO95453 639 aaKnown RBP9.38□□□□□ -0.91
VCAN-208ENST00000512590 S100GP29377 79 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 STIP1P31948 543 aaKnown RBP9.38□□□□□ -0.91
VCAN-208ENST00000512590 LAMC2Q13753 1193 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 DEFB115Q30KQ5 88 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 PLEKHH3Q7Z736 793 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 PDIK1LQ8N165 341 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 USP33Q8TEY7 942 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 SLC20A1Q8WUM9 679 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 ATXN3LQ9H3M9 355 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 C14orf93Q9H972 538 aaKnown RBP9.38□□□□□ -0.91
VCAN-208ENST00000512590 MRPL40Q9NQ50 206 aaKnown RBP9.38□□□□□ -0.91
VCAN-208ENST00000512590 TBC1D3BA6NDS4 549 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 UBE2Q2LH0YL09 131 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 RGS5O15539 181 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 FDX1P10109 184 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 HNRNPH1P31943 449 aaKnown RBP9.37□□□□□ -0.91
VCAN-208ENST00000512590 KRT31Q15323 416 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 SGO1Q5FBB7 561 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 RABGAP1LQ5R372 815 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 TMEM154Q6P9G4 183 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 STAG1Q8WVM7 1258 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 IPCEF1Q8WWN9 437 aaPredicted RBP9.37□□□□□ -0.91
VCAN-208ENST00000512590 MAML1Q92585 1016 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 MAGED4Q96JG8 741 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 CATSPERBQ9H7T0 1116 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 ATP10DQ9P241 1426 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 CNPP09543 421 aaKnown RBP9.37□□□□□ -0.91
VCAN-208ENST00000512590 PCP11498 1178 aaKnown RBP9.37□□□□□ -0.91
VCAN-208ENST00000512590 SFNP31947 248 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 KCNJ5P48544 419 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 MTMR2Q13614 643 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 BYSLQ13895 437 aaKnown RBP9.37□□□□□ -0.91
VCAN-208ENST00000512590 TRIP13Q15645 432 aaPredicted RBP9.37□□□□□ -0.91
VCAN-208ENST00000512590 UBE2SQ16763 222 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 CDKL3Q8IVW4 592 aaPredicted RBP9.37□□□□□ -0.91
VCAN-208ENST00000512590 DPP10Q8N608 796 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 BBS4Q96RK4 519 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 CARD14Q9BXL6 1004 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 ASAP1Q9ULH1 1129 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 CRYL1Q9Y2S2 319 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 TJP3O95049 919 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 SLC25A27O95847 323 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 ADD1P35611 737 aaKnown RBP9.37□□□□□ -0.91
VCAN-208ENST00000512590 HDLBPQ00341 1268 aaKnown RBP9.37□□□□□ -0.91
VCAN-208ENST00000512590 TMEM164Q5U3C3 297 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 EFCAB3Q8N7B9 438 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 FAM213AQ9BRX8 229 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 A0A088AWK7 358 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 F5H5T6 163 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 ATP9BO43861 1147 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 ALPPL2P10696 532 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 ZNF10P21506 573 aaPredicted RBP9.37□□□□□ -0.91
VCAN-208ENST00000512590 PHKA1P46020 1223 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 TTLL9Q3SXZ7 439 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 TEDDM1Q5T9Z0 273 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 DOK6Q6PKX4 331 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 CCDC149Q6ZUS6 474 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 CENPUQ71F23 418 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 HDDC2Q7Z4H3 204 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 ICA1LQ8NDH6 482 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 CLIP3Q96DZ5 547 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 GULP1Q9UBP9 304 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 DSEQ9UL01 958 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 TRIM33Q9UPN9 1127 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 CALB1P05937 261 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 RPL10AP62906 217 aaKnown RBP9.37□□□□□ -0.91
VCAN-208ENST00000512590 PCSK7Q16549 785 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 CDK20Q8IZL9 346 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 RIN3Q8TB24 985 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 CLMNQ96JQ2 1002 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 BFARQ9NZS9 450 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 LIMA1Q9UHB6 759 aaKnown RBP9.37□□□□□ -0.91
VCAN-208ENST00000512590 BAIAP2L1Q9UHR4 511 aa9.37□□□□□ -0.91
VCAN-208ENST00000512590 TDRKHQ9Y2W6 561 aaKnown RBP9.37□□□□□ -0.91
VCAN-208ENST00000512590 ARHGEF11O15085 1522 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 CYP2E1P05181 493 aaPredicted RBP9.36□□□□□ -0.91
VCAN-208ENST00000512590 CSF1RP07333 972 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 SLC44A4Q53GD3 710 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 ARHGAP17Q68EM7 881 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 SETD3Q86TU7 594 aaPredicted RBP9.36□□□□□ -0.91
VCAN-208ENST00000512590 CRLF3Q8IUI8 442 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 TRIM58Q8NG06 486 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 USP44Q9H0E7 712 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 POLE3Q9NRF9 147 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 CHMP2BQ9UQN3 213 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 CFTRP13569 1480 aa9.36□□□□□ -0.91
VCAN-208ENST00000512590 MANSC4A6NHS7 340 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms