RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 RASSF3Q86WH2 238 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 DDHD1Q8NEL9 900 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 CFAP36Q96G28 342 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 POLR3FQ9H1D9 316 aaPredicted RBP11.44□□□□□ -0.58
CPNE4-209ENST00000512055 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.44□□□□□ -0.58
CPNE4-209ENST00000512055 SNX24Q9Y343 169 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 SPDYE2BA6NHP3 402 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 CLDN3O15551 220 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 SPDYE6P0CI01 402 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 OSBPP22059 807 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 HOXA10P31260 410 aaPredicted RBP11.44□□□□□ -0.58
CPNE4-209ENST00000512055 PSMC6P62333 389 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 Q3C1V9 767 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 ETNK1Q9HBU6 452 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 RGPD2P0DJD1 1756 aa11.44□□□□□ -0.58
CPNE4-209ENST00000512055 KLHL18O94889 574 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 ECEL1O95672 775 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 GPC5P78333 572 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 FUT2Q10981 343 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 IL17AQ16552 155 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 PPP6R3Q5H9R7 873 aaPredicted RBP11.43□□□□□ -0.58
CPNE4-209ENST00000512055 ALS2CLQ60I27 953 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 TMEM270Q6UE05 265 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 C4orf50Q6ZRC1 276 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 SLC26A7Q8TE54 656 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 MCRS1Q96EZ8 462 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 FMO2Q99518 471 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 MXRA8Q9BRK3 442 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 ZNF302Q9NR11 478 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 NFKBIL1Q9UBC1 381 aaPredicted RBP11.43□□□□□ -0.58
CPNE4-209ENST00000512055 FAM237AA0A1B0GTK4 181 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 ZBTB24O43167 697 aaPredicted RBP11.43□□□□□ -0.58
CPNE4-209ENST00000512055 FMO5P49326 533 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 ANGEL2Q5VTE6 544 aaKnown RBP11.43□□□□□ -0.58
CPNE4-209ENST00000512055 LRRN4CLQ8ND94 238 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 LPAR1Q92633 364 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 QKIQ96PU8 341 aaKnown RBP eCLIP11.43□□□□□ -0.58
CPNE4-209ENST00000512055 DEFB129Q9H1M3 183 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 EHD4Q9H223 541 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 ADNPQ9H2P0 1102 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 PITPNM2Q9BZ72 1349 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 SSU72P8A0A1W2PR75 194 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 SNUPNO95149 360 aaKnown RBP11.43□□□□□ -0.58
CPNE4-209ENST00000512055 GMPSP49915 693 aaPredicted RBP11.43□□□□□ -0.58
CPNE4-209ENST00000512055 KRT39Q6A163 491 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 CENPPQ6IPU0 288 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 DNAJC24Q6P3W2 148 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 CLMNQ96JQ2 1002 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 PNMA5Q96PV4 448 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 HEMGNQ9BXL5 484 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 LACRTQ9GZZ8 138 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 CYP26A1O43174 497 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 RASSF9O75901 435 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 NR3C2P08235 984 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 ARP10275 920 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 CA4P22748 312 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 RINT1Q6NUQ1 792 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 SH3RF1Q7Z6J0 888 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 CDC26Q8NHZ8 85 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 KLC2Q9H0B6 622 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 HSPBP1Q9NZL4 362 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 MPP6Q9NZW5 540 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 HESX1Q9UBX0 185 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 PLAGL2Q9UPG8 496 aa11.43□□□□□ -0.58
CPNE4-209ENST00000512055 SYNJ2BP-COX16A0A087WUM0 186 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 ZSCAN9O15535 394 aaPredicted RBP11.42□□□□□ -0.58
CPNE4-209ENST00000512055 MT-ND3P03897 115 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 RPS6P62753 249 aaKnown RBP11.42□□□□□ -0.58
CPNE4-209ENST00000512055 CCNA1P78396 465 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 TRIM25Q14258 630 aaKnown RBP11.42□□□□□ -0.58
CPNE4-209ENST00000512055 COG2Q14746 738 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 NOP9Q86U38 636 aaKnown RBP11.42□□□□□ -0.58
CPNE4-209ENST00000512055 ATG4CQ96DT6 458 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 TAAR1Q96RJ0 339 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 LBHD1Q9BQE6 289 aaPredicted RBP11.42□□□□□ -0.58
CPNE4-209ENST00000512055 JPH1Q9HDC5 661 aaPredicted RBP11.42□□□□□ -0.58
CPNE4-209ENST00000512055 COX16Q9P0S2 106 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 SLC9A2Q9UBY0 812 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 GOLGA8RI6L899 631 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 CAP2P40123 477 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 CASP4P49662 377 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 NDUFA5Q16718 116 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 RABGAP1LQ5R372 815 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 SLFN12LQ6IEE8 588 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 ANGPTL8Q6UXH0 198 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 KCNK18Q7Z418 384 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 RAB44Q7Z6P3 723 aaPredicted RBP11.42□□□□□ -0.58
CPNE4-209ENST00000512055 APOBEC3FQ8IUX4 373 aaKnown RBP11.42□□□□□ -0.58
CPNE4-209ENST00000512055 PPP1R14BQ96C90 147 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 DNAJC7Q99615 494 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 MTRQ99707 1265 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 C11orf70Q9BRQ4 267 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 INTS13Q9NVM9 706 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 SGK1O00141 431 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 KLRC1P26715 233 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 MED21Q13503 144 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 DENND6AQ8IWF6 608 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 USP33Q8TEY7 942 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 LZICQ8WZA0 190 aa11.42□□□□□ -0.58
CPNE4-209ENST00000512055 UNC45AQ9H3U1 944 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms