RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 FAM193AP78312 1265 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 NKX6-1P78426 367 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 GPSM2P81274 684 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 PURAQ00577 322 aaKnown RBP4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 RHDQ02161 417 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 GALEQ14376 348 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 SAFBQ15424 915 aaKnown RBP eCLIP4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 ZXDCQ2QGD7 858 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 PABPC1LQ4VXU2 614 aaKnown RBP4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 ATXN7L2Q5T6C5 722 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 RNF220Q5VTB9 566 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 OTUD7BQ6GQQ9 843 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 SEM1Q6ZVN7 128 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 POLNQ7Z5Q5 900 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 APBB1IPQ7Z5R6 666 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 COL23A1Q86Y22 540 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 DCBLD1Q8N8Z6 715 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 PLBD2Q8NHP8 589 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 ZFP28Q8NHY6 868 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 ATXN2LQ8WWM7 1075 aaKnown RBP4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 ST8SIA2Q92186 375 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 NT5C1BQ96P26 610 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 C1orf43Q9BWL3 253 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 PACSIN1Q9BY11 444 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 GSTO2Q9H4Y5 243 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 HECAQ9UBI9 543 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 SLC23A1Q9UHI7 598 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 CLCA2Q9UQC9 943 aa4.28□□□□□ -1.72
TRAPPC11-207ENST00000511409 A0A088AWK7 358 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 K7ESM1 405 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 MGEA5O60502 916 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 PQBP1O60828 265 aaKnown RBP4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 AHSGP02765 367 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 AMHP03971 560 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 FTH1P19P0C7X4 201 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 PRDX5P30044 214 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 PHKA1P46020 1223 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 KCNJ5P48544 419 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 PIK3CGP48736 1102 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 BMT2Q1RMZ1 405 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 KHDC1LQ5JSQ8 128 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 SYCP2LQ5T4T6 812 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 DOK3Q7L591 496 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 MAEAQ7L5Y9 396 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 PPP1R3BQ86XI6 285 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 KIAA0319LQ8IZA0 1049 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 AOPEPQ8N6M6 819 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 NLGN4YQ8NFZ3 816 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 PJA1Q8NG27 643 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 LRTOMTQ8WZ04 291 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 MIEF2Q96C03 454 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 PGBD4Q96DM1 585 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 APOL5Q9BWW9 433 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 LSM14BQ9BX40 385 aaKnown RBP4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 C1QTNF3Q9BXJ4 246 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 ZMAT3Q9HA38 289 aaKnown RBP4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 SLC52A1Q9NWF4 448 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 USP25Q9UHP3 1055 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 L1RE1Q9UN81 338 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 MYRFQ9Y2G1 1151 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 SLC30A1Q9Y6M5 507 aa4.27□□□□□ -1.73
TRAPPC11-207ENST00000511409 PNPLA7Q6ZV29 1317 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 NT5C1B-RDH14C9J2C7 533 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 GOLIM4O00461 696 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 APAF1O14727 1248 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 PHGDHO43175 533 aaKnown RBP4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 ZNF623O75123 536 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 HRGP04196 525 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 ITGB1P05556 798 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 MYL3P08590 195 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 KITP10721 976 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 ACO1P21399 889 aaKnown RBP4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 COMTP21964 271 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 MGAT1P26572 445 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 PEX2P28328 305 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 SLC7A1P30825 629 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 MAGEA10P43363 369 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 NEK3P51956 506 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 NOMO3P69849 1222 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 CRHR2Q13324 411 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 PICALMQ13492 652 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 HDAC1Q13547 482 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 UBXN2BQ14CS0 331 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 BRD3Q15059 726 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 HS1BP3Q53T59 392 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 CCDC93Q567U6 631 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 DACT2Q5SW24 774 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 IL31Q6EBC2 164 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 SWSAP1Q6NVH7 229 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 MED25Q71SY5 747 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 ANKRD35Q8N283 1001 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 CELF5Q8N6W0 485 aaKnown RBP4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 PCSK9Q8NBP7 692 aaKnown RBP4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 MDGA1Q8NFP4 955 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 DNERQ8NFT8 737 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 FAM89AQ96GI7 184 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 LOXL4Q96JB6 756 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 NDC1Q9BTX1 674 aa4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 CPEB1Q9BZB8 566 aaKnown RBP4.26□□□□□ -1.73
TRAPPC11-207ENST00000511409 BHMT2Q9H2M3 363 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms