RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 TMEM130Q8N3G9 435 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 MYCT1Q8N699 235 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 KREMEN2Q8NCW0 462 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 ANP32BQ92688 251 aaKnown RBP11.24□□□□□ -0.61
PFDN1-203ENST00000510217 SYAP1Q96A49 352 aaPredicted RBP11.24□□□□□ -0.61
PFDN1-203ENST00000510217 C18orf25Q96B23 403 aaPredicted RBP11.24□□□□□ -0.61
PFDN1-203ENST00000510217 BICD1Q96G01 975 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 DDX27Q96GQ7 796 aaKnown RBP11.24□□□□□ -0.61
PFDN1-203ENST00000510217 SMOC2Q9H3U7 446 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 PLEKHA4Q9H4M7 779 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 WDR6Q9NNW5 1121 aaKnown RBP11.24□□□□□ -0.61
PFDN1-203ENST00000510217 SLC38A7Q9NVC3 462 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 ZDHHC7Q9NXF8 308 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 MTRRQ9UBK8 725 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 STK17AQ9UEE5 414 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 TBX20Q9UMR3 447 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 SORCS3Q9UPU3 1222 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 ARIH1Q9Y4X5 557 aaPredicted RBP11.24□□□□□ -0.61
PFDN1-203ENST00000510217 CLUHO75153 1309 aa11.24□□□□□ -0.61
PFDN1-203ENST00000510217 DOCK8Q8NF50 2099 aa11.23□□□□□ -0.61
PFDN1-203ENST00000510217 I3L4J1 428 aa11.23□□□□□ -0.61
PFDN1-203ENST00000510217 STK25O00506 426 aa11.23□□□□□ -0.61
PFDN1-203ENST00000510217 HNRNPDLO14979 420 aaKnown RBP11.23□□□□□ -0.61
PFDN1-203ENST00000510217 CLDN3O15551 220 aa11.23□□□□□ -0.61
PFDN1-203ENST00000510217 KRT18P05783 430 aaKnown RBP11.23□□□□□ -0.61
PFDN1-203ENST00000510217 ASGR2P07307 311 aa11.23□□□□□ -0.61
PFDN1-203ENST00000510217 TNFSF9P41273 254 aa11.23□□□□□ -0.61
PFDN1-203ENST00000510217 NASPP49321 788 aaPredicted RBP11.23□□□□□ -0.61
PFDN1-203ENST00000510217 LIG4P49917 911 aa11.23□□□□□ -0.61
PFDN1-203ENST00000510217 MTMR3Q13615 1198 aa11.23□□□□□ -0.61
PFDN1-203ENST00000510217 ZBTB41Q5SVQ8 909 aa11.23□□□□□ -0.61
PFDN1-203ENST00000510217 CAVIN1Q6NZI2 390 aaKnown RBP11.23□□□□□ -0.61
PFDN1-203ENST00000510217 PDXDC1Q6P996 788 aa11.23□□□□□ -0.61
PFDN1-203ENST00000510217 DCLRE1AQ6PJP8 1040 aa11.23□□□□□ -0.61
PFDN1-203ENST00000510217 RSPO2Q6UXX9 243 aaPredicted RBP11.23□□□□□ -0.61
PFDN1-203ENST00000510217 CYP26C1Q6V0L0 522 aa11.23□□□□□ -0.61
PFDN1-203ENST00000510217 BMP8AQ7Z5Y6 402 aa11.23□□□□□ -0.61
PFDN1-203ENST00000510217 MAP4K3Q8IVH8 894 aa11.23□□□□□ -0.61
PFDN1-203ENST00000510217 SMG7Q92540 1137 aaKnown RBP11.23□□□□□ -0.61
PFDN1-203ENST00000510217 PPP1R9BQ96SB3 815 aa11.23□□□□□ -0.61
PFDN1-203ENST00000510217 ZSCAN16Q9H4T2 348 aaPredicted RBP11.23□□□□□ -0.61
PFDN1-203ENST00000510217 TUBGCP4Q9UGJ1 667 aa11.23□□□□□ -0.61
PFDN1-203ENST00000510217 A0A087X0B3 334 aa11.22□□□□□ -0.61
PFDN1-203ENST00000510217 TTC26A0AVF1 554 aa11.22□□□□□ -0.61
PFDN1-203ENST00000510217 MYMKA6NI61 221 aa11.22□□□□□ -0.61
PFDN1-203ENST00000510217 PRPF40AO75400 957 aaKnown RBP11.22□□□□□ -0.61
PFDN1-203ENST00000510217 ZMYND10O75800 440 aa11.22□□□□□ -0.61
PFDN1-203ENST00000510217 SCP2P22307 547 aa11.22□□□□□ -0.61
PFDN1-203ENST00000510217 NMT1P30419 496 aaKnown RBP11.22□□□□□ -0.61
PFDN1-203ENST00000510217 MATR3P43243 847 aaKnown RBP eCLIP11.22□□□□□ -0.616e-8■■■□□ 18.9
PFDN1-203ENST00000510217 SLC39A14Q15043 492 aa11.22□□□□□ -0.61
PFDN1-203ENST00000510217 OTOP3Q7RTS5 596 aa11.22□□□□□ -0.61
PFDN1-203ENST00000510217 SFR1Q86XK3 245 aa11.22□□□□□ -0.61
PFDN1-203ENST00000510217 ACSF2Q96CM8 615 aaPredicted RBP11.22□□□□□ -0.61
PFDN1-203ENST00000510217 PRKD2Q9BZL6 878 aa11.22□□□□□ -0.61
PFDN1-203ENST00000510217 ZHX3Q9H4I2 956 aa11.22□□□□□ -0.61
PFDN1-203ENST00000510217 CCDC39Q9UFE4 941 aa11.22□□□□□ -0.61
PFDN1-203ENST00000510217 LIMD1Q9UGP4 676 aa11.22□□□□□ -0.61
PFDN1-203ENST00000510217 ATP6V1DQ9Y5K8 247 aa11.22□□□□□ -0.61
PFDN1-203ENST00000510217 A0A0B4J269 797 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 TISP43B9A030 160 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 OGTO15294 1046 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 TRAPPC3O43617 180 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 PPP1R37O75864 691 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 C8AP07357 584 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 CLTAP09496 248 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 HOXA9P31269 272 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 RPL9P32969 192 aaKnown RBP11.21□□□□□ -0.61
PFDN1-203ENST00000510217 OR1D2P34982 312 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 TXLNAP40222 546 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 GTF2BQ00403 316 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 PPP2R3AQ06190 1150 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 SPAG1Q07617 926 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 RAB33AQ14088 237 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 ENOX2Q16206 610 aaKnown RBP11.21□□□□□ -0.61
PFDN1-203ENST00000510217 ZC2HC1CQ53FD0 456 aaPredicted RBP11.21□□□□□ -0.61
PFDN1-203ENST00000510217 LIN9Q5TKA1 542 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 RRAGBQ5VZM2 374 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 ANKS3Q6ZW76 656 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 DYMQ7RTS9 669 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 UBALD2Q8IYN6 164 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 KRI1Q8N9T8 703 aaKnown RBP11.21□□□□□ -0.61
PFDN1-203ENST00000510217 LINC00301Q8NCQ3 95 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 SLC7A14Q8TBB6 771 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 GPT2Q8TD30 523 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 DDX12PQ92771 950 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 PBXIP1Q96AQ6 731 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 DNAJC19Q96DA6 116 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 TRIM44Q96DX7 344 aaPredicted RBP11.21□□□□□ -0.61
PFDN1-203ENST00000510217 FAM122AQ96E09 287 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 KIF12Q96FN5 646 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 MFSD14AQ96MC6 490 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 MYADMQ96S97 322 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 ST6GALNAC4Q9H4F1 302 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 PLEKHA5Q9HAU0 1116 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 BACE2Q9Y5Z0 518 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 CDY1Q9Y6F8 540 aa11.21□□□□□ -0.61
PFDN1-203ENST00000510217 MYO10Q9HD67 2058 aa11.21□□□□□ -0.62
PFDN1-203ENST00000510217 DOCK6Q96HP0 2047 aa11.2□□□□□ -0.62
PFDN1-203ENST00000510217 NOTCH4Q99466 2003 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms