RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 KLHL29Q96CT2 875 aa11.98□□□□□ -0.49
COPS4-206ENST00000509093 CEP170P1Q96L14 293 aa11.98□□□□□ -0.49
COPS4-206ENST00000509093 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.98□□□□□ -0.49
COPS4-206ENST00000509093 LSM14BQ9BX40 385 aaKnown RBP11.98□□□□□ -0.49
COPS4-206ENST00000509093 ADAM22Q9P0K1 906 aa11.98□□□□□ -0.49
COPS4-206ENST00000509093 IGSF9BQ9UPX0 1349 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 MCM3APO60318 1980 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 CLIC2O15247 247 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 KRT16P08779 473 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 FKBP3Q00688 224 aaKnown RBP11.97□□□□□ -0.49
COPS4-206ENST00000509093 ROR2Q01974 943 aaKnown RBP11.97□□□□□ -0.49
COPS4-206ENST00000509093 KLHL30Q0D2K2 578 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 RAPGEF1Q13905 1077 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 GJC2Q5T442 439 aaPredicted RBP11.97□□□□□ -0.49
COPS4-206ENST00000509093 FAM102BQ5T8I3 360 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 RGMBQ6NW40 437 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 ARMCX2Q7L311 632 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 METTL13Q8N6R0 699 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 ITFG2Q969R8 447 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 NAF1Q96HR8 494 aaKnown RBP11.97□□□□□ -0.49
COPS4-206ENST00000509093 PRMT1Q99873 361 aaKnown RBP11.97□□□□□ -0.49
COPS4-206ENST00000509093 DPH5Q9H2P9 285 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 EPB41L4BQ9H329 900 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 ZNF302Q9NR11 478 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 AIPL1Q9NZN9 384 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 SEPT9Q9UHD8 586 aaPredicted RBP11.97□□□□□ -0.49
COPS4-206ENST00000509093 USP15Q9Y4E8 981 aaPredicted RBP11.97□□□□□ -0.49
COPS4-206ENST00000509093 ATP8B3O60423 1300 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 TRPM7Q96QT4 1865 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 IGKV6D-21A0A0A0MT36 114 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 A8MUI8 341 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 RGS16O15492 202 aaPredicted RBP11.97□□□□□ -0.49
COPS4-206ENST00000509093 SHBGP04278 402 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 CTCFP49711 727 aaPredicted RBP11.97□□□□□ -0.49
COPS4-206ENST00000509093 PAPOLAP51003 745 aaKnown RBP11.97□□□□□ -0.49
COPS4-206ENST00000509093 POLR2FP61218 127 aaKnown RBP11.97□□□□□ -0.49
COPS4-206ENST00000509093 ADAM9Q13443 819 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 ASIC2Q16515 512 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 CMPK2Q5EBM0 449 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 DENND2CQ68D51 928 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 CCDC62Q6P9F0 684 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 ZC3H3Q8IXZ2 948 aaKnown RBP11.97□□□□□ -0.49
COPS4-206ENST00000509093 BSNDQ8WZ55 320 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 FAM210AQ96ND0 272 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 ZIC5Q96T25 663 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 TSC22D3Q99576 134 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 PLCD4Q9BRC7 762 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 STRA6Q9BX79 667 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 PABPC3Q9H361 631 aaKnown RBP11.97□□□□□ -0.49
COPS4-206ENST00000509093 TRAF3IP3Q9Y228 551 aa11.97□□□□□ -0.49
COPS4-206ENST00000509093 MAFBQ9Y5Q3 323 aaPredicted RBP11.97□□□□□ -0.49
COPS4-206ENST00000509093 WDR81Q562E7 1941 aa11.96□□□□□ -0.49
COPS4-206ENST00000509093 O00370 1275 aa11.96□□□□□ -0.49
COPS4-206ENST00000509093 TGFB3P10600 412 aa11.96□□□□□ -0.49
COPS4-206ENST00000509093 ITGA4P13612 1032 aa11.96□□□□□ -0.49
COPS4-206ENST00000509093 PLS3P13797 630 aa11.96□□□□□ -0.49
COPS4-206ENST00000509093 NR2F2P24468 414 aa11.96□□□□□ -0.49
COPS4-206ENST00000509093 POU5F1Q01860 360 aaKnown RBP11.96□□□□□ -0.49
COPS4-206ENST00000509093 HSDL1Q3SXM5 330 aa11.96□□□□□ -0.49
COPS4-206ENST00000509093 MTERF2Q49AM1 385 aa11.96□□□□□ -0.49
COPS4-206ENST00000509093 METTL7BQ6UX53 244 aa11.96□□□□□ -0.49
COPS4-206ENST00000509093 ASRGL1Q7L266 308 aa11.96□□□□□ -0.49
COPS4-206ENST00000509093 TRIM50Q86XT4 487 aa11.96□□□□□ -0.49
COPS4-206ENST00000509093 FAM167BQ9BTA0 163 aa11.96□□□□□ -0.49
COPS4-206ENST00000509093 KIFC3Q9BVG8 833 aa11.96□□□□□ -0.49
COPS4-206ENST00000509093 AZI2Q9H6S1 392 aa11.96□□□□□ -0.49
COPS4-206ENST00000509093 XPNPEP1Q9NQW7 623 aa11.96□□□□□ -0.49
COPS4-206ENST00000509093 SEL1LQ9UBV2 794 aa11.96□□□□□ -0.49
COPS4-206ENST00000509093 ADAMTS1Q9UHI8 967 aa11.96□□□□□ -0.49
COPS4-206ENST00000509093 ADGRA2Q96PE1 1338 aa11.96□□□□□ -0.5
COPS4-206ENST00000509093 TISP43B9A030 160 aa11.95□□□□□ -0.5
COPS4-206ENST00000509093 K7ENM7 598 aa11.95□□□□□ -0.5
COPS4-206ENST00000509093 SUN1O94901 812 aa11.95□□□□□ -0.5
COPS4-206ENST00000509093 RTN3O95197 1032 aaPredicted RBP11.95□□□□□ -0.5
COPS4-206ENST00000509093 NPTXRO95502 500 aa11.95□□□□□ -0.5
COPS4-206ENST00000509093 TCF7P36402 384 aaPredicted RBP11.95□□□□□ -0.5
COPS4-206ENST00000509093 CASP4P49662 377 aa11.95□□□□□ -0.5
COPS4-206ENST00000509093 PEX3P56589 373 aa11.95□□□□□ -0.5
COPS4-206ENST00000509093 MRPS35P82673 323 aaKnown RBP11.95□□□□□ -0.5
COPS4-206ENST00000509093 SF3A3Q12874 501 aaKnown RBP eCLIP11.95□□□□□ -0.5
COPS4-206ENST00000509093 FAM110CQ1W6H9 321 aa11.95□□□□□ -0.5
COPS4-206ENST00000509093 EDRF1Q3B7T1 1238 aa11.95□□□□□ -0.5
COPS4-206ENST00000509093 CELF3Q5SZQ8 465 aaKnown RBP11.95□□□□□ -0.5
COPS4-206ENST00000509093 OTUD6AQ7L8S5 288 aa11.95□□□□□ -0.5
COPS4-206ENST00000509093 CEP63Q96MT8 703 aa11.95□□□□□ -0.5
COPS4-206ENST00000509093 CELF4Q9BZC1 486 aaKnown RBP11.95□□□□□ -0.5
COPS4-206ENST00000509093 STMN4Q9H169 189 aaPredicted RBP11.95□□□□□ -0.5
COPS4-206ENST00000509093 PDLIM7Q9NR12 457 aa11.95□□□□□ -0.5
COPS4-206ENST00000509093 CYP26B1Q9NR63 512 aa11.95□□□□□ -0.5
COPS4-206ENST00000509093 PAPOLBQ9NRJ5 636 aaKnown RBP11.95□□□□□ -0.5
COPS4-206ENST00000509093 TYW1Q9NV66 732 aaKnown RBP11.95□□□□□ -0.5
COPS4-206ENST00000509093 SUCLA2Q9P2R7 463 aaPredicted RBP11.95□□□□□ -0.5
COPS4-206ENST00000509093 PLXNB2O15031 1838 aa11.95□□□□□ -0.5
COPS4-206ENST00000509093 ASB14A6NK59 587 aa11.95□□□□□ -0.5
COPS4-206ENST00000509093 FAM155AB1AL88 458 aaPredicted RBP11.95□□□□□ -0.5
COPS4-206ENST00000509093 E7ENQ6 273 aa11.95□□□□□ -0.5
COPS4-206ENST00000509093 PDXKO00764 312 aa11.95□□□□□ -0.5
COPS4-206ENST00000509093 EIF3DO15371 548 aaKnown RBP eCLIP11.95□□□□□ -0.5
COPS4-206ENST00000509093 SLC16A4O15374 487 aa11.95□□□□□ -0.5
COPS4-206ENST00000509093 NR3C1P04150 777 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms