RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 PCDHA13Q9Y5I0 950 aa7.07□□□□□ -1.28
TOPBP1-206ENST00000508524 PIPSLA2A3N6 862 aa7.06□□□□□ -1.28
TOPBP1-206ENST00000508524 CDKL5O76039 1030 aa7.06□□□□□ -1.28
TOPBP1-206ENST00000508524 ALAS1P13196 640 aa7.06□□□□□ -1.28
TOPBP1-206ENST00000508524 SLC6A4P31645 630 aa7.06□□□□□ -1.28
TOPBP1-206ENST00000508524 TAP1Q03518 808 aa7.06□□□□□ -1.28
TOPBP1-206ENST00000508524 ODF1Q14990 250 aa7.06□□□□□ -1.28
TOPBP1-206ENST00000508524 C3orf36Q3SXR2 165 aa7.06□□□□□ -1.28
TOPBP1-206ENST00000508524 ARMC6Q6NXE6 501 aa7.06□□□□□ -1.28
TOPBP1-206ENST00000508524 IFI44Q8TCB0 444 aa7.06□□□□□ -1.28
TOPBP1-206ENST00000508524 COA7Q96BR5 231 aa7.06□□□□□ -1.28
TOPBP1-206ENST00000508524 TMX3Q96JJ7 454 aa7.06□□□□□ -1.28
TOPBP1-206ENST00000508524 ASPSCR1Q9BZE9 553 aa7.06□□□□□ -1.28
TOPBP1-206ENST00000508524 SLC13A1Q9BZW2 595 aa7.06□□□□□ -1.28
TOPBP1-206ENST00000508524 C11orf54Q9H0W9 315 aaPredicted RBP7.06□□□□□ -1.28
TOPBP1-206ENST00000508524 TOR3AQ9H497 397 aa7.06□□□□□ -1.28
TOPBP1-206ENST00000508524 GSTO2Q9H4Y5 243 aa7.06□□□□□ -1.28
TOPBP1-206ENST00000508524 CYP4F11Q9HBI6 524 aa7.06□□□□□ -1.28
TOPBP1-206ENST00000508524 TDP1Q9NUW8 608 aa7.06□□□□□ -1.28
TOPBP1-206ENST00000508524 USP25Q9UHP3 1055 aa7.06□□□□□ -1.28
TOPBP1-206ENST00000508524 SERPINB13Q9UIV8 391 aa7.06□□□□□ -1.28
TOPBP1-206ENST00000508524 AATKQ6ZMQ8 1374 aa7.06□□□□□ -1.28
TOPBP1-206ENST00000508524 CDHR4A6H8M9 788 aa7.05□□□□□ -1.28
TOPBP1-206ENST00000508524 SGTAO43765 313 aa7.05□□□□□ -1.28
TOPBP1-206ENST00000508524 EGR2P11161 476 aaPredicted RBP7.05□□□□□ -1.28
TOPBP1-206ENST00000508524 TGM1P22735 817 aa7.05□□□□□ -1.28
TOPBP1-206ENST00000508524 KIF23Q02241 960 aaPredicted RBP7.05□□□□□ -1.28
TOPBP1-206ENST00000508524 IL10RAQ13651 578 aa7.05□□□□□ -1.28
TOPBP1-206ENST00000508524 PTPN21Q16825 1174 aa7.05□□□□□ -1.28
TOPBP1-206ENST00000508524 FUBP1Q96AE4 644 aaKnown RBP7.05□□□□□ -1.28
TOPBP1-206ENST00000508524 ALOXE3Q9BYJ1 711 aa7.05□□□□□ -1.28
TOPBP1-206ENST00000508524 MRFAP1Q9Y605 127 aa7.05□□□□□ -1.28
TOPBP1-206ENST00000508524 CCDC154A6NI56 674 aa7.04□□□□□ -1.28
TOPBP1-206ENST00000508524 OVOL3O00110 214 aa7.04□□□□□ -1.28
TOPBP1-206ENST00000508524 KIAA0391O15091 583 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-206ENST00000508524 RHOBTB3O94955 611 aa7.04□□□□□ -1.28
TOPBP1-206ENST00000508524 CKBP12277 381 aa7.04□□□□□ -1.28
TOPBP1-206ENST00000508524 NOMO3P69849 1222 aa7.04□□□□□ -1.28
TOPBP1-206ENST00000508524 CXADRP78310 365 aa7.04□□□□□ -1.28
TOPBP1-206ENST00000508524 HSD11B2P80365 405 aa7.04□□□□□ -1.28
TOPBP1-206ENST00000508524 MXRA7P84157 204 aa7.04□□□□□ -1.28
TOPBP1-206ENST00000508524 CREMQ03060 361 aa7.04□□□□□ -1.28
TOPBP1-206ENST00000508524 SLFN5Q08AF3 891 aa7.04□□□□□ -1.28
TOPBP1-206ENST00000508524 NOMO2Q5JPE7 1267 aa7.04□□□□□ -1.28
TOPBP1-206ENST00000508524 ABHD17BQ5VST6 288 aa7.04□□□□□ -1.28
TOPBP1-206ENST00000508524 RSPH3Q86UC2 560 aa7.04□□□□□ -1.28
TOPBP1-206ENST00000508524 CMTR2Q8IYT2 770 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-206ENST00000508524 LCORLQ8N3X6 602 aa7.04□□□□□ -1.28
TOPBP1-206ENST00000508524 FITM2Q8N6M3 262 aa7.04□□□□□ -1.28
TOPBP1-206ENST00000508524 LINC00476Q8WZB0 136 aa7.04□□□□□ -1.28
TOPBP1-206ENST00000508524 MRGPRX4Q96LA9 322 aa7.04□□□□□ -1.28
TOPBP1-206ENST00000508524 KCNE5Q9UJ90 142 aa7.04□□□□□ -1.28
TOPBP1-206ENST00000508524 EPN1Q9Y6I3 576 aaPredicted RBP7.04□□□□□ -1.28
TOPBP1-206ENST00000508524 FOSP01100 380 aaPredicted RBP7.03□□□□□ -1.28
TOPBP1-206ENST00000508524 SBK3P0C264 359 aa7.03□□□□□ -1.28
TOPBP1-206ENST00000508524 USP14P54578 494 aa7.03□□□□□ -1.28
TOPBP1-206ENST00000508524 PNMA8AQ86V59 439 aaPredicted RBP7.03□□□□□ -1.28
TOPBP1-206ENST00000508524 NUP133Q8WUM0 1156 aa7.03□□□□□ -1.28
TOPBP1-206ENST00000508524 KAT5Q92993 513 aa7.03□□□□□ -1.28
TOPBP1-206ENST00000508524 NACC2Q96BF6 587 aa7.03□□□□□ -1.28
TOPBP1-206ENST00000508524 MARS2Q96GW9 593 aaKnown RBP7.03□□□□□ -1.28
TOPBP1-206ENST00000508524 COQ10AQ96MF6 247 aa7.03□□□□□ -1.28
TOPBP1-206ENST00000508524 DMRTA2Q96SC8 542 aa7.03□□□□□ -1.28
TOPBP1-206ENST00000508524 TMEM74BQ9NUR3 256 aa7.03□□□□□ -1.28
TOPBP1-206ENST00000508524 HSFX1Q9UBD0 423 aa7.03□□□□□ -1.28
TOPBP1-206ENST00000508524 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.03□□□□□ -1.28
TOPBP1-206ENST00000508524 PCDHB1Q9Y5F3 818 aa7.03□□□□□ -1.28
TOPBP1-206ENST00000508524 GRM6O15303 877 aa7.02□□□□□ -1.29
TOPBP1-206ENST00000508524 HAUS5O94927 633 aa7.02□□□□□ -1.29
TOPBP1-206ENST00000508524 ZRANB2O95218 330 aaKnown RBP eCLIP7.02□□□□□ -1.29
TOPBP1-206ENST00000508524 GPANK1O95872 356 aa7.02□□□□□ -1.29
TOPBP1-206ENST00000508524 LMNAP02545 664 aaKnown RBP7.02□□□□□ -1.29
TOPBP1-206ENST00000508524 ADRA1BP35368 520 aa7.02□□□□□ -1.29
TOPBP1-206ENST00000508524 ADKP55263 362 aaKnown RBP7.02□□□□□ -1.29
TOPBP1-206ENST00000508524 ZNF280AP59817 542 aaPredicted RBP7.02□□□□□ -1.29
TOPBP1-206ENST00000508524 ATP2B3Q16720 1220 aa7.02□□□□□ -1.29
TOPBP1-206ENST00000508524 SPDYE7PQ495Y7 208 aa7.02□□□□□ -1.29
TOPBP1-206ENST00000508524 EFCAB2Q5VUJ9 269 aa7.02□□□□□ -1.29
TOPBP1-206ENST00000508524 GPR149Q86SP6 731 aa7.02□□□□□ -1.29
TOPBP1-206ENST00000508524 SUPT20HQ8NEM7 779 aa7.02□□□□□ -1.29
TOPBP1-206ENST00000508524 TBC1D15Q8TC07 691 aa7.02□□□□□ -1.29
TOPBP1-206ENST00000508524 RNF31Q96EP0 1072 aa7.02□□□□□ -1.29
TOPBP1-206ENST00000508524 BOD1Q96IK1 185 aa7.02□□□□□ -1.29
TOPBP1-206ENST00000508524 SMAD5Q99717 465 aaKnown RBP7.02□□□□□ -1.29
TOPBP1-206ENST00000508524 RNF181Q9P0P0 153 aa7.02□□□□□ -1.29
TOPBP1-206ENST00000508524 NOX1Q9Y5S8 564 aa7.02□□□□□ -1.29
TOPBP1-206ENST00000508524 ZFPL1O95159 310 aa7.01□□□□□ -1.29
TOPBP1-206ENST00000508524 HKR1P10072 659 aa7.01□□□□□ -1.29
TOPBP1-206ENST00000508524 ITGAMP11215 1152 aa7.01□□□□□ -1.29
TOPBP1-206ENST00000508524 FCER1AP12319 257 aa7.01□□□□□ -1.29
TOPBP1-206ENST00000508524 AVPR1BP47901 424 aa7.01□□□□□ -1.29
TOPBP1-206ENST00000508524 SEC24CP53992 1094 aa7.01□□□□□ -1.29
TOPBP1-206ENST00000508524 BLOC1S1P78537 153 aa7.01□□□□□ -1.29
TOPBP1-206ENST00000508524 TLE1Q04724 770 aa7.01□□□□□ -1.29
TOPBP1-206ENST00000508524 FOXI1Q12951 378 aa7.01□□□□□ -1.29
TOPBP1-206ENST00000508524 RAB39AQ14964 217 aa7.01□□□□□ -1.29
TOPBP1-206ENST00000508524 CYP2A13Q16696 494 aa7.01□□□□□ -1.29
TOPBP1-206ENST00000508524 PABPC1LQ4VXU2 614 aaKnown RBP7.01□□□□□ -1.29
TOPBP1-206ENST00000508524 FAM43AQ8N2R8 423 aa7.01□□□□□ -1.29
TOPBP1-206ENST00000508524 NLGN4YQ8NFZ3 816 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms