RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 ALG6Q9Y672 507 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 DYTNA2CJ06 578 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 HNRNPCL2B2RXH8 293 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 OATP04181 439 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 WEE2P0C1S8 567 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 SKIV2L2P42285 1042 aaKnown RBP7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 DDB1Q16531 1140 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 TTMPQ5BVD1 217 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 HEATR6Q6AI08 1181 aaKnown RBP7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 LUZP2Q86TE4 346 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 TRIM69Q86WT6 500 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 ARID3BQ8IVW6 561 aaPredicted RBP7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 LENG1Q96BZ8 264 aaPredicted RBP7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 PPP1R14BQ96C90 147 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 DISP1Q96F81 1524 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 CNPY3Q9BT09 278 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 CDCA7Q9BWT1 371 aaPredicted RBP7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 FRMD8P1Q9BZ68 369 aaPredicted RBP7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 ZNF219Q9P2Y4 722 aaPredicted RBP7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 PPME1Q9Y570 386 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 USP1O94782 785 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 PSMG1O95456 288 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 CTDNEP1O95476 244 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 GSNP06396 782 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 PPARGP37231 505 aaPredicted RBP7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 DYNLL1P63167 89 aaKnown RBP7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 DMPKQ09013 629 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 EZH2Q15910 746 aaKnown RBP7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 ZFP1Q6P2D0 407 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 C1orf228Q6PIY5 440 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 TMC3Q7Z5M5 1100 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 CPXCR1Q8N123 301 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 TRPC4APQ8TEL6 797 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 ARHGEF26Q96DR7 871 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 PAIP1Q9H074 479 aaKnown RBP7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 VPS33BQ9H267 617 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 RAD21L1Q9H4I0 556 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 MPP6Q9NZW5 540 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 COPG2Q9UBF2 871 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 BCL10O95999 233 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 S100A1P23297 94 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 MCAMP43121 646 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 VCPP55072 806 aaKnown RBP7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 ITGB3BPQ13352 177 aaPredicted RBP7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 PTPAQ15257 358 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 RASA2Q15283 850 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 CHI3L2Q15782 390 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 ARL13BQ3SXY8 428 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 FAM47CQ5HY64 1035 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 RNF43Q68DV7 783 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 ITPRIPL1Q6GPH6 555 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 PASD1Q8IV76 773 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 STKLD1Q8NE28 680 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 SLC7A3Q8WY07 619 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 ZSWIM1Q9BR11 485 aa7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 ZC3H7BQ9UGR2 993 aaKnown RBP7.68□□□□□ -1.18
UBE2D3-224ENST00000508474 PNPLA6Q8IY17 1366 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 MROH7Q68CQ1 1323 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 PJA2O43164 708 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 IFNA8P32881 189 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 BCAR1P56945 870 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 ITGA9Q13797 1035 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 MFSD14BQ5SR56 506 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 ZNF746Q6NUN9 644 aaPredicted RBP7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 BNC2Q6ZN30 1099 aaPredicted RBP7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 C3orf62Q6ZUJ4 267 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 TLK2Q86UE8 772 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 PPIL6Q8IXY8 311 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 MICU2Q8IYU8 434 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 OMA1Q96E52 524 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 CNDP1Q96KN2 507 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 TMEM120AQ9BXJ8 343 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 METTL5Q9NRN9 209 aaKnown RBP7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 KLHL8Q9P2G9 620 aaPredicted RBP7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 MARCOQ9UEW3 520 aaPredicted RBP7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 CFAP99D6REC4 459 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 UNC5CO95185 931 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 MYL2P10916 166 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 COMTP21964 271 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 PSMA4P25789 261 aaKnown RBP7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 GJA8P48165 433 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 ST13P50502 369 aaKnown RBP7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 EIF3EP60228 445 aaKnown RBP7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 XRCC4Q13426 336 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 PI16Q6UXB8 463 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 PARD3BQ8TEW8 1205 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 GDPD5Q8WTR4 605 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 GLG1Q92896 1179 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 CEP95Q96GE4 821 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 MAGEB5Q9BZ81 275 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 EFCAB1Q9HAE3 211 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 ABCF3Q9NUQ8 709 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 XPO7Q9UIA9 1087 aaKnown RBP7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 MYO3BQ8WXR4 1341 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 KIF1BO60333 1816 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 TRPC5OSA6NMA1 111 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 PP2D1A8MPX8 630 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 NFIBO00712 420 aa7.67□□□□□ -1.18
UBE2D3-224ENST00000508474 P4HA2O15460 535 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms