RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 LINC00271P0C7V0 271 aa11.08□□□□□ -0.64
HTT-204ENST00000508321 TNNI1P19237 187 aa11.08□□□□□ -0.64
HTT-204ENST00000508321 CTNNB1P35222 781 aa11.08□□□□□ -0.64
HTT-204ENST00000508321 ERVK-21P61565 698 aa11.08□□□□□ -0.64
HTT-204ENST00000508321 TFAMQ00059 246 aaKnown RBP11.08□□□□□ -0.64
HTT-204ENST00000508321 TAP1Q03518 808 aa11.08□□□□□ -0.64
HTT-204ENST00000508321 UBE3AQ05086 875 aa11.08□□□□□ -0.64
HTT-204ENST00000508321 UPP1Q16831 310 aa11.08□□□□□ -0.64
HTT-204ENST00000508321 KCNT2Q6UVM3 1135 aa11.08□□□□□ -0.64
HTT-204ENST00000508321 LRRC52Q8N7C0 313 aa11.08□□□□□ -0.64
HTT-204ENST00000508321 COLGALT1Q8NBJ5 622 aa11.08□□□□□ -0.64
HTT-204ENST00000508321 RDH13Q8NBN7 331 aa11.08□□□□□ -0.64
HTT-204ENST00000508321 CCDC127Q96BQ5 260 aa11.08□□□□□ -0.64
HTT-204ENST00000508321 CNOT6LQ96LI5 555 aaKnown RBP11.08□□□□□ -0.64
HTT-204ENST00000508321 COLEC11Q9BWP8 271 aa11.08□□□□□ -0.64
HTT-204ENST00000508321 SRRTQ9BXP5 876 aaKnown RBP11.08□□□□□ -0.64
HTT-204ENST00000508321 MTMR12Q9C0I1 747 aa11.08□□□□□ -0.64
HTT-204ENST00000508321 NRDE2Q9H7Z3 1164 aa11.08□□□□□ -0.64
HTT-204ENST00000508321 TUBGCP4Q9UGJ1 667 aa11.08□□□□□ -0.64
HTT-204ENST00000508321 LZTS1Q9Y250 596 aa11.08□□□□□ -0.64
HTT-204ENST00000508321 YBX2Q9Y2T7 364 aaKnown RBP11.08□□□□□ -0.64
HTT-204ENST00000508321 PLXNA4Q9HCM2 1894 aa11.08□□□□□ -0.64
HTT-204ENST00000508321 SF3B1O75533 1304 aaKnown RBP eCLIP11.08□□□□□ -0.64
HTT-204ENST00000508321 LAMA3Q16787 3333 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 LCHNA4D1U4 455 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 LRRIQ3A6PVS8 624 aaPredicted RBP11.07□□□□□ -0.64
HTT-204ENST00000508321 PODXLO00592 558 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 PMM2O15305 246 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 P4HA2O15460 535 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 TRAPPC3O43617 180 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 ALDH2P05091 517 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 BMPR1AP36894 532 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 MXI1P50539 228 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 AFF1P51825 1210 aaKnown RBP11.07□□□□□ -0.64
HTT-204ENST00000508321 BCAR1P56945 870 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 PLCB3Q01970 1234 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 CETN1Q12798 172 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 ZACNQ401N2 412 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 DCAF17Q5H9S7 520 aaPredicted RBP11.07□□□□□ -0.64
HTT-204ENST00000508321 CDKAL1Q5VV42 579 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 KRT39Q6A163 491 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 ZNF280BQ86YH2 543 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 TRIM59Q8IWR1 403 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 SLC39A11Q8N1S5 342 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 AOPEPQ8N6M6 819 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 SLC35C1Q96A29 364 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 TMEM169Q96HH4 297 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 MED15Q96RN5 788 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 NKX2-4Q9H2Z4 354 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 TMEM8AQ9HCN3 771 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 MIOSQ9NXC5 875 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 DPP3Q9NY33 737 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 SPG21Q9NZD8 308 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 FAN1Q9Y2M0 1017 aa11.07□□□□□ -0.64
HTT-204ENST00000508321 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.07□□□□□ -0.64
HTT-204ENST00000508321 SCN1AP35498 2009 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 ANO9A1A5B4 782 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 CASTOR2A6NHX0 329 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 KCNJ18B7U540 433 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 DDHD2O94830 711 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 STAU1O95793 577 aaKnown RBP11.06□□□□□ -0.64
HTT-204ENST00000508321 GALTP07902 379 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 ATICP31939 592 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 PBX2P40425 430 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 OR1G1P47890 313 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 SLC11A1P49279 550 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 TAF6P49848 677 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 CLCNKBP51801 687 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 WNT7BP56706 349 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 RBP5P82980 135 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 KRT17Q04695 432 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 SOX4Q06945 474 aaPredicted RBP11.06□□□□□ -0.64
HTT-204ENST00000508321 MYO1EQ12965 1108 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 BIRC3Q13489 604 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 KCNJ12Q14500 433 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 MAN2A1Q16706 1144 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 SV2CQ496J9 727 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 TCERG1LQ5VWI1 586 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 C9orf57Q5W0N0 161 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 DCLRE1AQ6PJP8 1040 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 C15orf39Q6ZRI6 1047 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 TRAPPC11Q7Z392 1133 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 DHX40Q8IX18 779 aaKnown RBP11.06□□□□□ -0.64
HTT-204ENST00000508321 GPR65Q8IYL9 337 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 C1orf127Q8N9H9 656 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 CCDC150Q8NCX0 1101 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 FBXO22Q8NEZ5 403 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 PLEKHO2Q8TD55 490 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 TAF4BQ92750 862 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 C18orf25Q96B23 403 aaPredicted RBP11.06□□□□□ -0.64
HTT-204ENST00000508321 EEF2KMTQ96G04 330 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 IGSF21Q96ID5 467 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 FAXDC2Q96IV6 333 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 IMPG2Q9BZV3 1241 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 LMAN2LQ9H0V9 348 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 GZF1Q9H116 711 aaPredicted RBP11.06□□□□□ -0.64
HTT-204ENST00000508321 MARCH5Q9NX47 278 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 DNAJB4Q9UDY4 337 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 ADAM28Q9UKQ2 775 aa11.06□□□□□ -0.64
HTT-204ENST00000508321 LAMA2P24043 3122 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms