RNA–Protein interactions for RNA: ENST00000508236.1

CCDC149-206, Transcript of coiled-coil domain containing 149, humanhuman

TSL 4

Gene CCDC149, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-206ENST00000508236 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.8□□□□□ -1
CCDC149-206ENST00000508236 COL1A1P02452 1464 aaPredicted RBP8.8□□□□□ -1
CCDC149-206ENST00000508236 TAF1LQ8IZX4 1826 aa8.8□□□□□ -1
CCDC149-206ENST00000508236 UBE2Q2LH0YL09 131 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 H2AFYO75367 372 aaKnown RBP8.79□□□□□ -1
CCDC149-206ENST00000508236 RPS6KA5O75582 802 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 KRT37O76014 449 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 SERPINC1P01008 464 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 TPM1P09493 284 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 ELNP15502 786 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 HIBADHP31937 336 aaKnown RBP8.79□□□□□ -1
CCDC149-206ENST00000508236 LSP1P33241 339 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 GPR3P46089 330 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 SARSP49591 514 aaKnown RBP8.79□□□□□ -1
CCDC149-206ENST00000508236 UBASH3AP57075 661 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 PHC1P78364 1004 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 LACTBP83111 547 aaPredicted RBP8.79□□□□□ -1
CCDC149-206ENST00000508236 PKN1Q16512 942 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 INF2Q27J81 1249 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 SBK1Q52WX2 424 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 INO80DQ53TQ3 878 aaPredicted RBP8.79□□□□□ -1
CCDC149-206ENST00000508236 CCDC178Q5BJE1 867 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 NT5DC1Q5TFE4 455 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 TBC1D9BQ66K14 1250 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 ISM2Q6H9L7 571 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 ARMCX5Q6P1M9 558 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 SEZ6L2Q6UXD5 910 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 MMS22LQ6ZRQ5 1243 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 FAM43BQ6ZT52 329 aaPredicted RBP8.79□□□□□ -1
CCDC149-206ENST00000508236 SRLQ86TD4 932 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 FOXP4Q8IVH2 680 aaPredicted RBP8.79□□□□□ -1
CCDC149-206ENST00000508236 ENAHQ8N8S7 591 aaPredicted RBP8.79□□□□□ -1
CCDC149-206ENST00000508236 LMBR1Q8WVP7 490 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 CELF1Q92879 486 aaKnown RBP8.79□□□□□ -1
CCDC149-206ENST00000508236 SMARCE1Q969G3 411 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 FERMT2Q96AC1 680 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 NSUN4Q96CB9 384 aaKnown RBP8.79□□□□□ -1
CCDC149-206ENST00000508236 TRIM11Q96F44 468 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 BOCQ9BWV1 1114 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 PRDM5Q9NQX1 630 aaPredicted RBP8.79□□□□□ -1
CCDC149-206ENST00000508236 MAN1B1Q9UKM7 699 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 NOC2LQ9Y3T9 749 aaKnown RBP8.79□□□□□ -1
CCDC149-206ENST00000508236 PCDHB6Q9Y5E3 794 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 SPO11Q9Y5K1 396 aa8.79□□□□□ -1
CCDC149-206ENST00000508236 NHSQ6T4R5 1651 aa8.78□□□□□ -1
CCDC149-206ENST00000508236 SBF2Q86WG5 1849 aa8.78□□□□□ -1
CCDC149-206ENST00000508236 TRBV23OR9-2A0A075B6M9 112 aa8.78□□□□□ -1
CCDC149-206ENST00000508236 NPHP3-ACAD11A0A0J9YXS1 232 aa8.78□□□□□ -1
CCDC149-206ENST00000508236 RASSF10A6NK89 507 aa8.78□□□□□ -1
CCDC149-206ENST00000508236 POLR2DO15514 142 aaKnown RBP8.78□□□□□ -1
CCDC149-206ENST00000508236 ZRANB2O95218 330 aaKnown RBP eCLIP8.78□□□□□ -1
CCDC149-206ENST00000508236 IPO7O95373 1038 aaKnown RBP8.78□□□□□ -1
CCDC149-206ENST00000508236 ZNF280AP59817 542 aaPredicted RBP8.78□□□□□ -1
CCDC149-206ENST00000508236 MECOMQ03112 1051 aa8.78□□□□□ -1
CCDC149-206ENST00000508236 RAPGEF1Q13905 1077 aa8.78□□□□□ -1
CCDC149-206ENST00000508236 ACAP2Q15057 778 aa8.78□□□□□ -1
CCDC149-206ENST00000508236 FAM83BQ5T0W9 1011 aa8.78□□□□□ -1
CCDC149-206ENST00000508236 ZFYVE27Q5T4F4 411 aa8.78□□□□□ -1
CCDC149-206ENST00000508236 B3GNT9Q6UX72 402 aa8.78□□□□□ -1
CCDC149-206ENST00000508236 TMTC3Q6ZXV5 915 aa8.78□□□□□ -1
CCDC149-206ENST00000508236 VSTM4Q8IW00 320 aa8.78□□□□□ -1
CCDC149-206ENST00000508236 CTCFLQ8NI51 663 aaPredicted RBP8.78□□□□□ -1
CCDC149-206ENST00000508236 SLC35G2Q8TBE7 412 aa8.78□□□□□ -1
CCDC149-206ENST00000508236 EXOC4Q96A65 974 aa8.78□□□□□ -1
CCDC149-206ENST00000508236 TCTN2Q96GX1 697 aa8.78□□□□□ -1
CCDC149-206ENST00000508236 TEKT5Q96M29 485 aa8.78□□□□□ -1
CCDC149-206ENST00000508236 PYM1Q9BRP8 204 aaKnown RBP8.78□□□□□ -1
CCDC149-206ENST00000508236 DUSP23Q9BVJ7 150 aa8.78□□□□□ -1
CCDC149-206ENST00000508236 CEP41Q9BYV8 373 aa8.78□□□□□ -1
CCDC149-206ENST00000508236 TMX4Q9H1E5 349 aaPredicted RBP8.78□□□□□ -1
CCDC149-206ENST00000508236 HSD3B7Q9H2F3 369 aa8.78□□□□□ -1
CCDC149-206ENST00000508236 RRAGCQ9HB90 399 aa8.78□□□□□ -1
CCDC149-206ENST00000508236 ARPP21Q9UBL0 812 aaPredicted RBP8.78□□□□□ -1
CCDC149-206ENST00000508236 LY75O60449 1722 aa8.77□□□□□ -1
CCDC149-206ENST00000508236 NAV1Q8NEY1 1877 aa8.77□□□□□ -1.01
CCDC149-206ENST00000508236 CYP2D7A0A087X1C5 515 aa8.77□□□□□ -1.01
CCDC149-206ENST00000508236 USP27XA6NNY8 438 aa8.77□□□□□ -1.01
CCDC149-206ENST00000508236 H0YHG0 523 aa8.77□□□□□ -1.01
CCDC149-206ENST00000508236 ALX3O95076 343 aa8.77□□□□□ -1.01
CCDC149-206ENST00000508236 GSTM1P09488 218 aa8.77□□□□□ -1.01
CCDC149-206ENST00000508236 SETSIPP0DME0 302 aa8.77□□□□□ -1.01
CCDC149-206ENST00000508236 SLURP2P0DP57 97 aa8.77□□□□□ -1.01
CCDC149-206ENST00000508236 TOP1P11387 765 aaKnown RBP8.77□□□□□ -1.01
CCDC149-206ENST00000508236 SLC9A1P19634 815 aa8.77□□□□□ -1.01
CCDC149-206ENST00000508236 AKAP5P24588 427 aa8.77□□□□□ -1.01
CCDC149-206ENST00000508236 TPP2P29144 1249 aaPredicted RBP8.77□□□□□ -1.01
CCDC149-206ENST00000508236 SERPINB3P29508 390 aa8.77□□□□□ -1.01
CCDC149-206ENST00000508236 KIF5BP33176 963 aa8.77□□□□□ -1.01
CCDC149-206ENST00000508236 TRAPPC10P48553 1259 aa8.77□□□□□ -1.01
CCDC149-206ENST00000508236 SMAD3P84022 425 aaKnown RBP8.77□□□□□ -1.01
CCDC149-206ENST00000508236 TROAPQ12815 778 aa8.77□□□□□ -1.01
CCDC149-206ENST00000508236 ZNF174Q15697 407 aa8.77□□□□□ -1.01
CCDC149-206ENST00000508236 SMAD2Q15796 467 aaKnown RBP8.77□□□□□ -1.01
CCDC149-206ENST00000508236 SGO2Q562F6 1265 aa8.77□□□□□ -1.01
CCDC149-206ENST00000508236 JAKMIP3Q5VZ66 844 aa8.77□□□□□ -1.01
CCDC149-206ENST00000508236 ERAP2Q6P179 960 aa8.77□□□□□ -1.01
CCDC149-206ENST00000508236 EFCAB13Q8IY85 973 aa8.77□□□□□ -1.01
CCDC149-206ENST00000508236 MSL3Q8N5Y2 521 aaKnown RBP8.77□□□□□ -1.01
CCDC149-206ENST00000508236 PLVAPQ9BX97 442 aa8.77□□□□□ -1.01
CCDC149-206ENST00000508236 CSRNP2Q9H175 543 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms