RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 GBP1P32455 592 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 CHKAP35790 457 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 PIK3CAP42336 1068 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 RTP1P59025 263 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 CALCOCO2Q13137 446 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 PSMD6Q15008 389 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 LONRF1Q17RB8 773 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 C6orf118Q5T5N4 469 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 TMEM270Q6UE05 265 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 ASAP3Q8TDY4 903 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 BBXQ8WY36 941 aaPredicted RBP11.65□□□□□ -0.54
LIN54-207ENST00000508171 DDX27Q96GQ7 796 aaKnown RBP11.65□□□□□ -0.54
LIN54-207ENST00000508171 CABS1Q96KC9 395 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 OSBPL7Q9BZF2 842 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 CNOT10Q9H9A5 744 aaKnown RBP11.65□□□□□ -0.54
LIN54-207ENST00000508171 PICK1Q9NRD5 415 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 GINM1Q9NU53 330 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 UMODL1Q5DID0 1318 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 LRRIQ4A6NIV6 560 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 FOXO6A8MYZ6 492 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 RASGRF2O14827 1237 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 DKC1O60832 514 aaKnown RBP eCLIP11.65□□□□□ -0.54
LIN54-207ENST00000508171 ZC3H11AO75152 810 aaKnown RBP eCLIP11.65□□□□□ -0.54
LIN54-207ENST00000508171 CYP1A1P04798 512 aaPredicted RBP11.65□□□□□ -0.54
LIN54-207ENST00000508171 DRD4P21917 467 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 NSFP46459 744 aaKnown RBP11.65□□□□□ -0.54
LIN54-207ENST00000508171 VPS41P49754 854 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 AUHQ13825 339 aaKnown RBP11.65□□□□□ -0.54
LIN54-207ENST00000508171 SLMAPQ14BN4 828 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 XKR3Q5GH77 459 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 C11orf70Q9BRQ4 267 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 TARS2Q9BW92 718 aaKnown RBP11.65□□□□□ -0.54
LIN54-207ENST00000508171 CDC42EP4Q9H3Q1 356 aaKnown RBP11.65□□□□□ -0.54
LIN54-207ENST00000508171 ANKFY1Q9P2R3 1169 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 ASIC3Q9UHC3 531 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 GGA2Q9UJY4 613 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 LCTP09848 1927 aa11.65□□□□□ -0.55
LIN54-207ENST00000508171 NFASCO94856 1347 aa11.65□□□□□ -0.55
LIN54-207ENST00000508171 C5orf60A6NFR6 353 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 K7ERI5 159 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 FSBPO95073 299 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 SUPT20HL2P0C7V6 817 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 GLRA2P23416 452 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 TAS2R40P59535 323 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 CNTN2Q02246 1040 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 CENPCQ03188 943 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 ADCY2Q08462 1091 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 STRN3Q13033 797 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 ZNF568Q3ZCX4 644 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 SUPT20HL1Q3ZLR7 823 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 DALRD3Q5D0E6 543 aaKnown RBP11.64□□□□□ -0.55
LIN54-207ENST00000508171 MIS18BP1Q6P0N0 1132 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 MON1BQ7L1V2 547 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 ANKS1BQ7Z6G8 1248 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 OR5B17Q8NGF7 314 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 ATXN2LQ8WWM7 1075 aaKnown RBP11.64□□□□□ -0.55
LIN54-207ENST00000508171 CENPTQ96BT3 561 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 CHMP6Q96FZ7 201 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 ZNF317Q96PQ6 595 aaPredicted RBP11.64□□□□□ -0.55
LIN54-207ENST00000508171 PLVAPQ9BX97 442 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 FAM129AQ9BZQ8 928 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 CCDC113Q9H0I3 377 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 AVENQ9NQS1 362 aaPredicted RBP11.64□□□□□ -0.55
LIN54-207ENST00000508171 FBXO40Q9UH90 709 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 TTLL13PA6NNM8 815 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 H0YHG0 523 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 DNM1LO00429 736 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 RALAP11233 206 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 HNRNPH1P31943 449 aaKnown RBP11.64□□□□□ -0.55
LIN54-207ENST00000508171 SEPT14Q6ZU15 432 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 PRUNE1Q86TP1 453 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 CCDC50Q8IVM0 306 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 C3orf20Q8ND61 904 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 SLCO2A1Q92959 643 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 RUNDC3BQ96NL0 473 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 PRMT1Q99873 361 aaKnown RBP11.64□□□□□ -0.55
LIN54-207ENST00000508171 JPH2Q9BR39 696 aaPredicted RBP11.64□□□□□ -0.55
LIN54-207ENST00000508171 TEX13BQ9BXU2 312 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 ACAD9Q9H845 621 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 AS3MTQ9HBK9 375 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 RBAKQ9NYW8 714 aaPredicted RBP11.64□□□□□ -0.55
LIN54-207ENST00000508171 PPP1R1BQ9UD71 204 aaPredicted RBP11.64□□□□□ -0.55
LIN54-207ENST00000508171 ZNF112Q9UJU3 913 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 NUB1Q9Y5A7 615 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 PCDHB4Q9Y5E5 795 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 STYXL1Q9Y6J8 313 aa11.64□□□□□ -0.55
LIN54-207ENST00000508171 AGTP01019 485 aa11.63□□□□□ -0.55
LIN54-207ENST00000508171 HARSP12081 509 aaKnown RBP11.63□□□□□ -0.55
LIN54-207ENST00000508171 CREB1P16220 341 aa11.63□□□□□ -0.55
LIN54-207ENST00000508171 NF2P35240 595 aa11.63□□□□□ -0.55
LIN54-207ENST00000508171 GJC1P36383 396 aa11.63□□□□□ -0.55
LIN54-207ENST00000508171 ITGA8P53708 1063 aa11.63□□□□□ -0.55
LIN54-207ENST00000508171 MAMLD1Q13495 774 aa11.63□□□□□ -0.55
LIN54-207ENST00000508171 CUL2Q13617 745 aa11.63□□□□□ -0.55
LIN54-207ENST00000508171 GNPTABQ3T906 1256 aa11.63□□□□□ -0.55
LIN54-207ENST00000508171 TNFAIP8L3Q5GJ75 292 aa11.63□□□□□ -0.55
LIN54-207ENST00000508171 KCNV1Q6PIU1 500 aa11.63□□□□□ -0.55
LIN54-207ENST00000508171 RHBDF2Q6PJF5 856 aa11.63□□□□□ -0.55
LIN54-207ENST00000508171 CATSPERGQ6ZRH7 1159 aa11.63□□□□□ -0.55
LIN54-207ENST00000508171 CACNA2D3Q8IZS8 1091 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms