RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 ADAT2Q7Z6V5 191 aaKnown RBP5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 EXOC3L1Q86VI1 746 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 CCDC25Q86WR0 208 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 VSIG1Q86XK7 387 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 FAM178BQ8IXR5 827 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 RPUSD2Q8IZ73 545 aaKnown RBP5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 CCDC89Q8N998 374 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 ANKRD42Q8N9B4 389 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 CNBD1Q8NA66 436 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 MARCH10Q8NA82 808 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 LINC00116Q8NCU8 138 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 ATL2Q8NHH9 583 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 ZNF564Q8TBZ8 553 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 ZNF398Q8TD17 642 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 C7orf43Q8WVR3 580 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 CD101Q93033 1021 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 ZNF775Q96BV0 537 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 ZNF653Q96CK0 615 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 ARHGEF26Q96DR7 871 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 SPDL1Q96EA4 605 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 SLC10A4Q96EP9 437 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 THOC1Q96FV9 657 aaKnown RBP5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 ACCSQ96QU6 501 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 RUSC1Q9BVN2 902 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 PITPNM3Q9BZ71 974 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 LRMDAQ9H2I8 198 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 VCXQ9H320 206 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 CDC42EP4Q9H3Q1 356 aaKnown RBP5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 RNPEPL1Q9HAU8 725 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 ERVK-5Q9HDB9 667 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 SLC5A4Q9NY91 659 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 TMOD4Q9NZQ9 345 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 LARSQ9P2J5 1176 aaKnown RBP5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 ANAPC5Q9UJX4 755 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 VAV3Q9UKW4 847 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 AGAP1Q9UPQ3 857 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 EXOC7Q9UPT5 735 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 NR2E1Q9Y466 385 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 DAGLAQ9Y4D2 1042 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 MYH14Q7Z406 1995 aaKnown RBP5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 IGSF9BQ9UPX0 1349 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 GSTTP1A0A1W2PQM5 241 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 CCDC189A1A4V9 331 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 LRRD1A4D1F6 860 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 ARHGEF35A5YM69 484 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 FOXN3O00409 490 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 MEIS1O00470 390 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 MEIS2O14770 477 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 MSH4O15457 936 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 AHCYL1O43865 530 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 SMNDC1O75940 238 aaKnown RBP eCLIP5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 ZIC2O95409 532 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 KRT16P08779 473 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 TROVE2P10155 538 aaKnown RBP eCLIP5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 PYGMP11217 842 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 TIMP2P16035 220 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 CALB2P22676 271 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 FSHRP23945 695 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 HMGB2P26583 209 aaKnown RBP5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 GTF2H1P32780 548 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 ABCD1P33897 745 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 PCK1P35558 622 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 VAMP7P51809 220 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 PRELPP51888 382 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 POLGP54098 1239 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 YARSP54577 528 aaKnown RBP5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 SH3BGRP55822 239 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 EIF6P56537 245 aaKnown RBP5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 BPIFB4P59827 614 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 PSMC6P62333 389 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 KCNJ2P63252 427 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 GPSM2P81274 684 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 KRT17Q04695 432 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 RASA3Q14644 834 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 LBRQ14739 615 aaKnown RBP5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 RASA2Q15283 850 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 AOC3Q16853 763 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 ARHGAP44Q17R89 818 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 LONRF1Q17RB8 773 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 NBPF20Q3BBV1 942 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 ZNF568Q3ZCX4 644 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 ACCSLQ4AC99 568 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 EPC2Q52LR7 807 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 ANKRD20A2Q5SQ80 823 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 LIN9Q5TKA1 542 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 ANKRD20A1Q5TYW2 823 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 ANKRD20A3Q5VUR7 823 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 AP1ARQ63HQ0 302 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 TTBK2Q6IQ55 1244 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 MIS18BP1Q6P0N0 1132 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 RHBDF2Q6PJF5 856 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 HHIPL2Q6UWX4 724 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 VSTM1Q6UX27 236 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 KCTD1Q719H9 257 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 ZNF677Q86XU0 584 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 TDRPQ86YL5 185 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 TPH2Q8IWU9 490 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 FAM71AQ8IYT1 594 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 ARHGAP24Q8N264 748 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 GMCL1P1Q8NEA9 526 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 210.6 ms