RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 CFHP08603 1231 aa22.74■■□□□ 1.23
CLDND1-216ENST00000507944 GRIN1Q05586 938 aa22.74■■□□□ 1.23
CLDND1-216ENST00000507944 CUL4AQ13619 759 aa22.74■■□□□ 1.23
CLDND1-216ENST00000507944 VARS2Q5ST30 1063 aaKnown RBP22.74■■□□□ 1.23
CLDND1-216ENST00000507944 CWF19L1Q69YN2 538 aaKnown RBP22.74■■□□□ 1.23
CLDND1-216ENST00000507944 LRRC15Q8TF66 581 aa22.74■■□□□ 1.23
CLDND1-216ENST00000507944 BICD1Q96G01 975 aa22.74■■□□□ 1.23
CLDND1-216ENST00000507944 REEP2Q9BRK0 252 aa22.74■■□□□ 1.23
CLDND1-216ENST00000507944 BLOC1S4Q9NUP1 217 aa22.74■■□□□ 1.23
CLDND1-216ENST00000507944 FAM86C1Q9NVL1 165 aa22.74■■□□□ 1.23
CLDND1-216ENST00000507944 CDH7Q9ULB5 785 aa22.74■■□□□ 1.23
CLDND1-216ENST00000507944 PDCD11Q14690 1871 aaKnown RBP22.74■■□□□ 1.23
CLDND1-216ENST00000507944 NOTCH4Q99466 2003 aa22.74■■□□□ 1.23
CLDND1-216ENST00000507944 PTPRZ1P23471 2315 aaPredicted RBP22.73■■□□□ 1.23
CLDND1-216ENST00000507944 SYN3O14994 580 aa22.73■■□□□ 1.23
CLDND1-216ENST00000507944 POU2F2P09086 479 aa22.73■■□□□ 1.23
CLDND1-216ENST00000507944 SRFP11831 508 aa22.73■■□□□ 1.23
CLDND1-216ENST00000507944 PLCG1P19174 1290 aa22.73■■□□□ 1.23
CLDND1-216ENST00000507944 HTR4Q13639 388 aa22.73■■□□□ 1.23
CLDND1-216ENST00000507944 MCM6Q14566 821 aa22.73■■□□□ 1.23
CLDND1-216ENST00000507944 KARSQ15046 597 aaKnown RBP22.73■■□□□ 1.23
CLDND1-216ENST00000507944 SLC8B1Q6J4K2 584 aa22.73■■□□□ 1.23
CLDND1-216ENST00000507944 MYCT1Q8N699 235 aa22.73■■□□□ 1.23
CLDND1-216ENST00000507944 RASSF8Q8NHQ8 419 aa22.73■■□□□ 1.23
CLDND1-216ENST00000507944 KCNN1Q92952 543 aa22.73■■□□□ 1.23
CLDND1-216ENST00000507944 HAPLN2Q9GZV7 340 aa22.73■■□□□ 1.23
CLDND1-216ENST00000507944 VPS37CA5D8V6 355 aaPredicted RBP22.72■■□□□ 1.23
CLDND1-216ENST00000507944 PI15O43692 258 aa22.72■■□□□ 1.23
CLDND1-216ENST00000507944 FAM13AO94988 1023 aa22.72■■□□□ 1.23
CLDND1-216ENST00000507944 CLTAP09496 248 aa22.72■■□□□ 1.23
CLDND1-216ENST00000507944 AOC1P19801 751 aa22.72■■□□□ 1.23
CLDND1-216ENST00000507944 ROR1Q01973 937 aa22.72■■□□□ 1.23
CLDND1-216ENST00000507944 ST13P5Q8NFI4 369 aaPredicted RBP22.72■■□□□ 1.23
CLDND1-216ENST00000507944 ZNF461Q8TAF7 563 aa22.72■■□□□ 1.23
CLDND1-216ENST00000507944 RAD54LQ92698 747 aa22.72■■□□□ 1.23
CLDND1-216ENST00000507944 PLEKHA5Q9HAU0 1116 aa22.72■■□□□ 1.23
CLDND1-216ENST00000507944 PARVGQ9HBI0 331 aa22.72■■□□□ 1.23
CLDND1-216ENST00000507944 TBX20Q9UMR3 447 aa22.72■■□□□ 1.23
CLDND1-216ENST00000507944 NUMBLQ9Y6R0 609 aa22.72■■□□□ 1.23
CLDND1-216ENST00000507944 H7C4K7 107 aa22.71■■□□□ 1.23
CLDND1-216ENST00000507944 ABLIM3O94929 683 aa22.71■■□□□ 1.23
CLDND1-216ENST00000507944 KRT18P05783 430 aaKnown RBP22.71■■□□□ 1.23
CLDND1-216ENST00000507944 CXCL8P10145 99 aa22.71■■□□□ 1.23
CLDND1-216ENST00000507944 PDCP20941 246 aa22.71■■□□□ 1.23
CLDND1-216ENST00000507944 LIG4P49917 911 aa22.71■■□□□ 1.23
CLDND1-216ENST00000507944 ZNF131P52739 623 aa22.71■■□□□ 1.23
CLDND1-216ENST00000507944 MRPL58Q14197 206 aaKnown RBP22.71■■□□□ 1.23
CLDND1-216ENST00000507944 ITFG1Q8TB96 612 aa22.71■■□□□ 1.23
CLDND1-216ENST00000507944 FGF13Q92913 245 aa22.71■■□□□ 1.23
CLDND1-216ENST00000507944 SUSD3Q96L08 255 aa22.71■■□□□ 1.23
CLDND1-216ENST00000507944 RTP3Q9BQQ7 232 aa22.71■■□□□ 1.23
CLDND1-216ENST00000507944 HCFC1R1Q9NWW0 138 aa22.71■■□□□ 1.23
CLDND1-216ENST00000507944 DNMT3BQ9UBC3 853 aaKnown RBP22.71■■□□□ 1.23
CLDND1-216ENST00000507944 KRBA1A5PL33 1030 aa22.7■■□□□ 1.22
CLDND1-216ENST00000507944 K7ENM7 598 aa22.7■■□□□ 1.22
CLDND1-216ENST00000507944 STK25O00506 426 aa22.7■■□□□ 1.22
CLDND1-216ENST00000507944 TRAK2O60296 914 aa22.7■■□□□ 1.22
CLDND1-216ENST00000507944 TBC1D4O60343 1298 aa22.7■■□□□ 1.22
CLDND1-216ENST00000507944 SCP2P22307 547 aa22.7■■□□□ 1.22
CLDND1-216ENST00000507944 ELF1P32519 619 aa22.7■■□□□ 1.22
CLDND1-216ENST00000507944 MCM4P33991 863 aa22.7■■□□□ 1.22
CLDND1-216ENST00000507944 ARPP19P56211 112 aa22.7■■□□□ 1.22
CLDND1-216ENST00000507944 SPAG1Q07617 926 aa22.7■■□□□ 1.22
CLDND1-216ENST00000507944 PABPC1LQ4VXU2 614 aaKnown RBP22.7■■□□□ 1.22
CLDND1-216ENST00000507944 PARM1Q6UWI2 310 aa22.7■■□□□ 1.22
CLDND1-216ENST00000507944 GPR152Q8TDT2 470 aa22.7■■□□□ 1.22
CLDND1-216ENST00000507944 RPP25Q9BUL9 199 aaKnown RBP22.7■■□□□ 1.22
CLDND1-216ENST00000507944 CCSER1Q9C0I3 900 aa22.7■■□□□ 1.22
CLDND1-216ENST00000507944 ZHX3Q9H4I2 956 aa22.7■■□□□ 1.22
CLDND1-216ENST00000507944 TUBGCP4Q9UGJ1 667 aa22.7■■□□□ 1.22
CLDND1-216ENST00000507944 CA14Q9ULX7 337 aa22.7■■□□□ 1.22
CLDND1-216ENST00000507944 ZFHX2Q9C0A1 2572 aaPredicted RBP22.7■■□□□ 1.22
CLDND1-216ENST00000507944 RIF1Q5UIP0 2472 aaKnown RBP22.69■■□□□ 1.22
CLDND1-216ENST00000507944 TTC26A0AVF1 554 aa22.69■■□□□ 1.22
CLDND1-216ENST00000507944 WDR27A2RRH5 827 aa22.69■■□□□ 1.22
CLDND1-216ENST00000507944 HNRNPDLO14979 420 aaKnown RBP22.69■■□□□ 1.22
CLDND1-216ENST00000507944 TNFSF9P41273 254 aa22.69■■□□□ 1.22
CLDND1-216ENST00000507944 KYAT1Q16773 422 aa22.69■■□□□ 1.22
CLDND1-216ENST00000507944 APPL2Q8NEU8 664 aa22.69■■□□□ 1.22
CLDND1-216ENST00000507944 LARP4BQ92615 738 aaKnown RBP22.69■■□□□ 1.22
CLDND1-216ENST00000507944 FGF14Q92915 247 aa22.69■■□□□ 1.22
CLDND1-216ENST00000507944 KIF12Q96FN5 646 aa22.69■■□□□ 1.22
CLDND1-216ENST00000507944 FBXL5Q9UKA1 691 aa22.69■■□□□ 1.22
CLDND1-216ENST00000507944 KCNH3Q9ULD8 1083 aa22.69■■□□□ 1.22
CLDND1-216ENST00000507944 CLIC4Q9Y696 253 aa22.69■■□□□ 1.22
CLDND1-216ENST00000507944 ARHGEF37A1IGU5 675 aa22.68■■□□□ 1.22
CLDND1-216ENST00000507944 PRRG1O14668 218 aa22.68■■□□□ 1.22
CLDND1-216ENST00000507944 TBCAO75347 108 aaKnown RBP22.68■■□□□ 1.22
CLDND1-216ENST00000507944 PIGRP01833 764 aa22.68■■□□□ 1.22
CLDND1-216ENST00000507944 ATF2P15336 505 aa22.68■■□□□ 1.22
CLDND1-216ENST00000507944 MARCKSP29966 332 aaPredicted RBP22.68■■□□□ 1.22
CLDND1-216ENST00000507944 DDIT3P35638 169 aa22.68■■□□□ 1.22
CLDND1-216ENST00000507944 PPP2R3AQ06190 1150 aa22.68■■□□□ 1.22
CLDND1-216ENST00000507944 ZBTB6Q15916 424 aa22.68■■□□□ 1.22
CLDND1-216ENST00000507944 CTXN3Q4LDR2 81 aa22.68■■□□□ 1.22
CLDND1-216ENST00000507944 MTSS1LQ765P7 747 aa22.68■■□□□ 1.22
CLDND1-216ENST00000507944 DDX12PQ92771 950 aa22.68■■□□□ 1.22
CLDND1-216ENST00000507944 EPSTI1Q96J88 318 aa22.68■■□□□ 1.22
CLDND1-216ENST00000507944 SLC2A4RGQ9NR83 387 aa22.68■■□□□ 1.22
CLDND1-216ENST00000507944 UBQLN1Q9UMX0 589 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms