RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 SLC22A17Q8WUG5 538 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 HDAC7Q8WUI4 952 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 PIK3R5Q8WYR1 880 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 C18orf25Q96B23 403 aaPredicted RBP16.99■□□□□ 0.31
COL1A1-211ENST00000507689 ZMAT2Q96NC0 199 aaKnown RBP16.99■□□□□ 0.31
COL1A1-211ENST00000507689 PHF7Q9BWX1 381 aaPredicted RBP16.99■□□□□ 0.31
COL1A1-211ENST00000507689 CXCL16Q9H2A7 254 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 PLEKHA4Q9H4M7 779 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 ASB7Q9H672 318 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 MAN1C1Q9NR34 630 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 DERAQ9Y315 318 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 A0A1B0GVL5 298 aa16.98■□□□□ 0.31
COL1A1-211ENST00000507689 EIF3DO15371 548 aaKnown RBP eCLIP16.98■□□□□ 0.31
COL1A1-211ENST00000507689 PPP1R37O75864 691 aa16.98■□□□□ 0.31
COL1A1-211ENST00000507689 PRPF6O94906 941 aaKnown RBP16.98■□□□□ 0.31
COL1A1-211ENST00000507689 MYL1P05976 194 aa16.98■□□□□ 0.31
COL1A1-211ENST00000507689 GARTP22102 1010 aa16.98■□□□□ 0.31
COL1A1-211ENST00000507689 PAX3P23760 479 aa16.98■□□□□ 0.31
COL1A1-211ENST00000507689 ZP2Q05996 745 aa16.98■□□□□ 0.31
COL1A1-211ENST00000507689 SPAG1Q07617 926 aa16.98■□□□□ 0.31
COL1A1-211ENST00000507689 ENOX2Q16206 610 aaKnown RBP16.98■□□□□ 0.31
COL1A1-211ENST00000507689 RTP2Q5QGT7 225 aa16.98■□□□□ 0.31
COL1A1-211ENST00000507689 SYCE2Q6PIF2 218 aa16.98■□□□□ 0.31
COL1A1-211ENST00000507689 PRSS55Q6UWB4 352 aaPredicted RBP16.98■□□□□ 0.31
COL1A1-211ENST00000507689 HS2ST1Q7LGA3 356 aa16.98■□□□□ 0.31
COL1A1-211ENST00000507689 FAM213AQ9BRX8 229 aa16.98■□□□□ 0.31
COL1A1-211ENST00000507689 HAPLN2Q9GZV7 340 aa16.98■□□□□ 0.31
COL1A1-211ENST00000507689 BLZF1Q9H2G9 400 aa16.98■□□□□ 0.31
COL1A1-211ENST00000507689 PIDD1Q9HB75 910 aa16.98■□□□□ 0.31
COL1A1-211ENST00000507689 EXOC1Q9NV70 894 aa16.98■□□□□ 0.31
COL1A1-211ENST00000507689 SERTAD1Q9UHV2 236 aa16.98■□□□□ 0.31
COL1A1-211ENST00000507689 CPSF3Q9UKF6 684 aaKnown RBP16.98■□□□□ 0.31
COL1A1-211ENST00000507689 STYXL1Q9Y6J8 313 aa16.98■□□□□ 0.31
COL1A1-211ENST00000507689 PRUNE2Q8WUY3 3088 aa16.98■□□□□ 0.31
COL1A1-211ENST00000507689 A0A1W2PQ27 194 aa16.97■□□□□ 0.31
COL1A1-211ENST00000507689 A0A1W2PQ64 194 aa16.97■□□□□ 0.31
COL1A1-211ENST00000507689 A0A1W2PQD8 194 aa16.97■□□□□ 0.31
COL1A1-211ENST00000507689 SYN3O14994 580 aa16.97■□□□□ 0.31
COL1A1-211ENST00000507689 EFEMP2O95967 443 aa16.97■□□□□ 0.31
COL1A1-211ENST00000507689 ALADP13716 330 aa16.97■□□□□ 0.31
COL1A1-211ENST00000507689 ANP32AP39687 249 aaKnown RBP16.97■□□□□ 0.31
COL1A1-211ENST00000507689 SOX4Q06945 474 aaPredicted RBP16.97■□□□□ 0.31
COL1A1-211ENST00000507689 SLC39A4Q6P5W5 647 aa16.97■□□□□ 0.31
COL1A1-211ENST00000507689 TMC5Q6UXY8 1006 aa16.97■□□□□ 0.31
COL1A1-211ENST00000507689 CYP26C1Q6V0L0 522 aa16.97■□□□□ 0.31
COL1A1-211ENST00000507689 USP37Q86T82 979 aa16.97■□□□□ 0.31
COL1A1-211ENST00000507689 FSIP1Q8NA03 581 aa16.97■□□□□ 0.31
COL1A1-211ENST00000507689 CACTINQ8WUQ7 758 aaKnown RBP16.97■□□□□ 0.31
COL1A1-211ENST00000507689 RPGRIP1Q96KN7 1286 aa16.97■□□□□ 0.31
COL1A1-211ENST00000507689 STRA6Q9BX79 667 aa16.97■□□□□ 0.31
COL1A1-211ENST00000507689 S1PR5Q9H228 398 aa16.97■□□□□ 0.31
COL1A1-211ENST00000507689 TSHZ2Q9NRE2 1034 aa16.97■□□□□ 0.31
COL1A1-211ENST00000507689 TUBGCP4Q9UGJ1 667 aa16.97■□□□□ 0.31
COL1A1-211ENST00000507689 UBE4BO95155 1302 aa16.96■□□□□ 0.31
COL1A1-211ENST00000507689 KIF20AO95235 890 aa16.96■□□□□ 0.31
COL1A1-211ENST00000507689 RPL17P18621 184 aaKnown RBP16.96■□□□□ 0.31
COL1A1-211ENST00000507689 FGFR3P22607 806 aa16.96■□□□□ 0.31
COL1A1-211ENST00000507689 BRCC3P46736 316 aa16.96■□□□□ 0.31
COL1A1-211ENST00000507689 CASP5P51878 434 aa16.96■□□□□ 0.31
COL1A1-211ENST00000507689 ZBTB41Q5SVQ8 909 aa16.96■□□□□ 0.31
COL1A1-211ENST00000507689 JADE1Q6IE81 842 aa16.96■□□□□ 0.31
COL1A1-211ENST00000507689 DSTYKQ6XUX3 929 aa16.96■□□□□ 0.31
COL1A1-211ENST00000507689 NT5DC4Q86YG4 428 aa16.96■□□□□ 0.31
COL1A1-211ENST00000507689 C12orf76Q8N812 135 aaPredicted RBP16.96■□□□□ 0.31
COL1A1-211ENST00000507689 LNX1Q8TBB1 728 aaPredicted RBP16.96■□□□□ 0.31
COL1A1-211ENST00000507689 SUSD6Q92537 303 aa16.96■□□□□ 0.31
COL1A1-211ENST00000507689 PAGE5Q96GU1 130 aa16.96■□□□□ 0.31
COL1A1-211ENST00000507689 KIAA1586Q9HCI6 787 aa16.96■□□□□ 0.31
COL1A1-211ENST00000507689 RBAKQ9NYW8 714 aaPredicted RBP16.96■□□□□ 0.31
COL1A1-211ENST00000507689 C2CD2Q9Y426 696 aa16.96■□□□□ 0.31
COL1A1-211ENST00000507689 UNC80Q8N2C7 3258 aa16.96■□□□□ 0.31
COL1A1-211ENST00000507689 TISP43B9A030 160 aa16.95■□□□□ 0.3
COL1A1-211ENST00000507689 I3L4J1 428 aa16.95■□□□□ 0.3
COL1A1-211ENST00000507689 TGM5O43548 720 aa16.95■□□□□ 0.3
COL1A1-211ENST00000507689 EXTL3O43909 919 aa16.95■□□□□ 0.3
COL1A1-211ENST00000507689 TKTP29401 623 aaKnown RBP16.95■□□□□ 0.3
COL1A1-211ENST00000507689 LRPAP1P30533 357 aa16.95■□□□□ 0.3
COL1A1-211ENST00000507689 ELF1P32519 619 aa16.95■□□□□ 0.3
COL1A1-211ENST00000507689 SNRPFP62306 86 aaKnown RBP16.95■□□□□ 0.3
COL1A1-211ENST00000507689 KCNA1Q09470 495 aa16.95■□□□□ 0.3
COL1A1-211ENST00000507689 PSMD2Q13200 908 aa16.95■□□□□ 0.3
COL1A1-211ENST00000507689 CUL4BQ13620 913 aa16.95■□□□□ 0.3
COL1A1-211ENST00000507689 ZNF280DQ6N043 979 aa16.95■□□□□ 0.3
COL1A1-211ENST00000507689 KANK3Q6NY19 840 aa16.95■□□□□ 0.3
COL1A1-211ENST00000507689 C15orf39Q6ZRI6 1047 aa16.95■□□□□ 0.3
COL1A1-211ENST00000507689 GPD1LQ8N335 351 aa16.95■□□□□ 0.3
COL1A1-211ENST00000507689 KREMEN2Q8NCW0 462 aa16.95■□□□□ 0.3
COL1A1-211ENST00000507689 SUSD3Q96L08 255 aa16.95■□□□□ 0.3
COL1A1-211ENST00000507689 C1QTNF1Q9BXJ1 281 aa16.95■□□□□ 0.3
COL1A1-211ENST00000507689 CGNQ9P2M7 1197 aaKnown RBP16.95■□□□□ 0.3
COL1A1-211ENST00000507689 HOOK1Q9UJC3 728 aaKnown RBP16.95■□□□□ 0.3
COL1A1-211ENST00000507689 BACE2Q9Y5Z0 518 aa16.95■□□□□ 0.3
COL1A1-211ENST00000507689 CITO14578 2027 aa16.95■□□□□ 0.3
COL1A1-211ENST00000507689 CCDC195A0A1B0GUA6 201 aa16.94■□□□□ 0.3
COL1A1-211ENST00000507689 FAM189A1O60320 539 aa16.94■□□□□ 0.3
COL1A1-211ENST00000507689 SPATA31D3P0C874 917 aa16.94■□□□□ 0.3
COL1A1-211ENST00000507689 OR1D2P34982 312 aa16.94■□□□□ 0.3
COL1A1-211ENST00000507689 NDUFA8P51970 172 aa16.94■□□□□ 0.3
COL1A1-211ENST00000507689 SURF1Q15526 300 aa16.94■□□□□ 0.3
COL1A1-211ENST00000507689 CTXN3Q4LDR2 81 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms