RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 ALKAL1Q6UXT8 129 aa18.12■□□□□ 0.49
SNF8-205ENST00000507302 IRF7Q92985 503 aa18.12■□□□□ 0.49
SNF8-205ENST00000507302 ADPGKQ9BRR6 497 aa18.12■□□□□ 0.49
SNF8-205ENST00000507302 ZFP14Q9HCL3 533 aa18.12■□□□□ 0.49
SNF8-205ENST00000507302 A0A087WWV3 80 aa18.11■□□□□ 0.49
SNF8-205ENST00000507302 TRAPPC3O43617 180 aa18.11■□□□□ 0.49
SNF8-205ENST00000507302 PFKFB2O60825 505 aa18.11■□□□□ 0.49
SNF8-205ENST00000507302 MOSPD3O75425 235 aa18.11■□□□□ 0.49
SNF8-205ENST00000507302 PRKCBP05771 671 aa18.11■□□□□ 0.49
SNF8-205ENST00000507302 CHRNB1P11230 501 aa18.11■□□□□ 0.49
SNF8-205ENST00000507302 NAMPTP43490 491 aa18.11■□□□□ 0.49
SNF8-205ENST00000507302 CCR3P51677 355 aa18.11■□□□□ 0.49
SNF8-205ENST00000507302 EPHA5P54756 1037 aa18.11■□□□□ 0.49
SNF8-205ENST00000507302 SPEM2Q0P670 501 aa18.11■□□□□ 0.49
SNF8-205ENST00000507302 GAS6Q14393 721 aa18.11■□□□□ 0.49
SNF8-205ENST00000507302 PPP2R5DQ14738 602 aa18.11■□□□□ 0.49
SNF8-205ENST00000507302 ST3GAL2Q16842 350 aa18.11■□□□□ 0.49
SNF8-205ENST00000507302 CATSPER3Q86XQ3 398 aa18.11■□□□□ 0.49
SNF8-205ENST00000507302 TCEAL4Q96EI5 215 aa18.11■□□□□ 0.49
SNF8-205ENST00000507302 TRMT61BQ9BVS5 477 aaKnown RBP18.11■□□□□ 0.49
SNF8-205ENST00000507302 TUFT1Q9NNX1 390 aa18.11■□□□□ 0.49
SNF8-205ENST00000507302 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.11■□□□□ 0.49
SNF8-205ENST00000507302 CNOT1A5YKK6 2376 aaKnown RBP18.1■□□□□ 0.49
SNF8-205ENST00000507302 ZNF197O14709 1029 aa18.1■□□□□ 0.49
SNF8-205ENST00000507302 FDPSP14324 419 aaKnown RBP18.1■□□□□ 0.49
SNF8-205ENST00000507302 PSMC3P17980 439 aa18.1■□□□□ 0.49
SNF8-205ENST00000507302 SOX4Q06945 474 aaPredicted RBP18.1■□□□□ 0.49
SNF8-205ENST00000507302 CSRP2Q16527 193 aa18.1■□□□□ 0.49
SNF8-205ENST00000507302 VITQ6UXI7 678 aa18.1■□□□□ 0.49
SNF8-205ENST00000507302 CCDC43Q96MW1 224 aaKnown RBP18.1■□□□□ 0.49
SNF8-205ENST00000507302 BRD9Q9H8M2 597 aa18.1■□□□□ 0.49
SNF8-205ENST00000507302 MAFFQ9ULX9 164 aa18.1■□□□□ 0.49
SNF8-205ENST00000507302 USP20Q9Y2K6 914 aa18.1■□□□□ 0.49
SNF8-205ENST00000507302 GREB1Q4ZG55 1949 aa18.1■□□□□ 0.49
SNF8-205ENST00000507302 NCANO14594 1321 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 SMIM28A0A1B0GU29 152 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 SYN3O14994 580 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 SEC24AO95486 1093 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 LRG1P02750 347 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 CYP11B2P19099 503 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 ATP2B1P20020 1258 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 CNR2P34972 360 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 KRT2P35908 639 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 TXKP42681 527 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 BRCC3P46736 316 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 GRM2Q14416 872 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 PPM1JQ5JR12 505 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 NT5DC1Q5TFE4 455 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 TPGS2Q68CL5 300 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 MAEAQ7L5Y9 396 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 DEPDC1BQ8WUY9 529 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 FAM3CQ92520 227 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 SMARCD2Q92925 531 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 ZSWIM3Q96MP5 696 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 NACC1Q96RE7 527 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 POLR3CQ9BUI4 534 aaPredicted RBP18.09■□□□□ 0.49
SNF8-205ENST00000507302 LMAN1LQ9HAT1 526 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 GOLGA2P5Q9HBQ8 144 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 SEMA4GQ9NTN9 838 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 RAB23Q9ULC3 237 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 NDRG2Q9UN36 371 aaKnown RBP18.09■□□□□ 0.49
SNF8-205ENST00000507302 GDAQ9Y2T3 454 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 INSL5Q9Y5Q6 135 aa18.09■□□□□ 0.49
SNF8-205ENST00000507302 CITO14578 2027 aa18.08■□□□□ 0.49
SNF8-205ENST00000507302 I3L4J1 428 aa18.08■□□□□ 0.48
SNF8-205ENST00000507302 HRO43593 1189 aa18.08■□□□□ 0.48
SNF8-205ENST00000507302 NEMFO60524 1076 aa18.08■□□□□ 0.48
SNF8-205ENST00000507302 MED24O75448 989 aa18.08■□□□□ 0.48
SNF8-205ENST00000507302 HOXA6P31267 233 aa18.08■□□□□ 0.48
SNF8-205ENST00000507302 SATB1Q01826 763 aa18.08■□□□□ 0.48
SNF8-205ENST00000507302 PTGDRQ13258 359 aa18.08■□□□□ 0.48
SNF8-205ENST00000507302 GLRA4Q5JXX5 417 aa18.08■□□□□ 0.48
SNF8-205ENST00000507302 PRR23CQ6ZRP0 262 aa18.08■□□□□ 0.48
SNF8-205ENST00000507302 MFSD6LQ8IWD5 586 aa18.08■□□□□ 0.48
SNF8-205ENST00000507302 SPEM1Q8N4L4 309 aa18.08■□□□□ 0.48
SNF8-205ENST00000507302 MSANTD3Q96H12 275 aa18.08■□□□□ 0.48
SNF8-205ENST00000507302 CORO1BQ9BR76 489 aa18.08■□□□□ 0.48
SNF8-205ENST00000507302 PDRG1Q9NUG6 133 aa18.08■□□□□ 0.48
SNF8-205ENST00000507302 TNFSF13BQ9Y275 285 aa18.08■□□□□ 0.48
SNF8-205ENST00000507302 PIAS3Q9Y6X2 628 aa18.08■□□□□ 0.48
SNF8-205ENST00000507302 K7ESF4 209 aa18.07■□□□□ 0.48
SNF8-205ENST00000507302 FOXD2O60548 495 aaPredicted RBP18.07■□□□□ 0.48
SNF8-205ENST00000507302 CXCL12P48061 93 aa18.07■□□□□ 0.48
SNF8-205ENST00000507302 EFNA5P52803 228 aa18.07■□□□□ 0.48
SNF8-205ENST00000507302 PPP2R5AQ15172 486 aa18.07■□□□□ 0.48
SNF8-205ENST00000507302 WDR44Q5JSH3 913 aa18.07■□□□□ 0.48
SNF8-205ENST00000507302 C1orf228Q6PIY5 440 aa18.07■□□□□ 0.48
SNF8-205ENST00000507302 PADI6Q6TGC4 694 aa18.07■□□□□ 0.48
SNF8-205ENST00000507302 LEMD2Q8NC56 503 aa18.07■□□□□ 0.48
SNF8-205ENST00000507302 WASF1Q92558 559 aa18.07■□□□□ 0.48
SNF8-205ENST00000507302 TMEM60Q9H2L4 133 aa18.07■□□□□ 0.48
SNF8-205ENST00000507302 PTPRHQ9HD43 1115 aa18.07■□□□□ 0.48
SNF8-205ENST00000507302 CEP72Q9P209 647 aa18.07■□□□□ 0.48
SNF8-205ENST00000507302 ORC3Q9UBD5 711 aaPredicted RBP18.07■□□□□ 0.48
SNF8-205ENST00000507302 TPCN1Q9ULQ1 816 aa18.07■□□□□ 0.48
SNF8-205ENST00000507302 CEP295Q9C0D2 2601 aa18.06■□□□□ 0.48
SNF8-205ENST00000507302 NUP210Q8TEM1 1887 aaPredicted RBP18.06■□□□□ 0.48
SNF8-205ENST00000507302 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.06■□□□□ 0.48
SNF8-205ENST00000507302 PRRG1O14668 218 aa18.06■□□□□ 0.48
SNF8-205ENST00000507302 TM4SF5O14894 197 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms