RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 TRAK2O60296 914 aa15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 N4BP1O75113 896 aaKnown RBP15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 PDGFBP01127 241 aaPredicted RBP15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 RFX1P22670 979 aa15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 TKTP29401 623 aaKnown RBP15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 MARCKSP29966 332 aaPredicted RBP15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 POU5F1Q01860 360 aaKnown RBP15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 PPP2R3AQ06190 1150 aa15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 RAD51AP2Q09MP3 1159 aa15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 SLC10A6Q3KNW5 377 aa15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 VARS2Q5ST30 1063 aaKnown RBP15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 ZNF280DQ6N043 979 aa15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 CD300LGQ6UXG3 332 aa15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 GRASPQ7Z6J2 395 aaPredicted RBP15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 MYCT1Q8N699 235 aa15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 KRI1Q8N9T8 703 aaKnown RBP15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 LARP4BQ92615 738 aaKnown RBP15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 RAD54LQ92698 747 aa15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 SUSD3Q96L08 255 aa15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 ZMAT2Q96NC0 199 aaKnown RBP15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 PLIN2Q99541 437 aa15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 REEP2Q9BRK0 252 aa15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 CXCL16Q9H2A7 254 aa15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 GOLGA2P5Q9HBQ8 144 aa15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 SLC2A4RGQ9NR83 387 aa15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 STK17AQ9UEE5 414 aa15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 MORC2Q9Y6X9 1032 aaPredicted RBP15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 TRIP11Q15643 1979 aa15.73■□□□□ 0.11
HMGCS1-203ENST00000507004 DOCK8Q8NF50 2099 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 VPS37CA5D8V6 355 aaPredicted RBP15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 K7ENM7 598 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 OGTO15294 1046 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 LRG1P02750 347 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 MYBP10242 640 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 PDIA4P13667 645 aaKnown RBP15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 ATF2P15336 505 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 LRPAP1P30533 357 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 MCM4P33991 863 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 DDIT3P35638 169 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 BRCC3P46736 316 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 SOX4Q06945 474 aaPredicted RBP15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 HTR4Q13639 388 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 MRPL58Q14197 206 aaKnown RBP15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 ARSHQ5FYA8 562 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 SLFN12LQ6IEE8 588 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 TMEM105Q8N8V8 129 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 LEMD2Q8NC56 503 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 C3orf58Q8NDZ4 430 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 FLCNQ8NFG4 579 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 ATOH1Q92858 354 aaPredicted RBP15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 HVCN1Q96D96 273 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 SHDQ96IW2 340 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 ZBTB45Q96K62 511 aaPredicted RBP15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 ST6GALNAC4Q9H4F1 302 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 RPF1Q9H9Y2 349 aaKnown RBP15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 TBX20Q9UMR3 447 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 PCDHB8Q9UN66 801 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 POLIQ9UNA4 740 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 VWA8A3KMH1 1905 aa15.72■□□□□ 0.11
HMGCS1-203ENST00000507004 TTC26A0AVF1 554 aa15.71■□□□□ 0.11
HMGCS1-203ENST00000507004 PRRG1O14668 218 aa15.71■□□□□ 0.11
HMGCS1-203ENST00000507004 ZNF197O14709 1029 aa15.71■□□□□ 0.11
HMGCS1-203ENST00000507004 CCL16O15467 120 aa15.71■□□□□ 0.11
HMGCS1-203ENST00000507004 ADAM12O43184 909 aa15.71■□□□□ 0.11
HMGCS1-203ENST00000507004 MICAL2O94851 1124 aa15.71■□□□□ 0.11
HMGCS1-203ENST00000507004 ABLIM3O94929 683 aa15.71■□□□□ 0.11
HMGCS1-203ENST00000507004 PLCG1P19174 1290 aa15.71■□□□□ 0.11
HMGCS1-203ENST00000507004 PFKPQ01813 784 aa15.71■□□□□ 0.11
HMGCS1-203ENST00000507004 ROR1Q01973 937 aa15.71■□□□□ 0.11
HMGCS1-203ENST00000507004 PABPC1LQ4VXU2 614 aaKnown RBP15.71■□□□□ 0.11
HMGCS1-203ENST00000507004 PHLDB3Q6NSJ2 640 aa15.71■□□□□ 0.11
HMGCS1-203ENST00000507004 TCEAL8Q8IYN2 117 aa15.71■□□□□ 0.11
HMGCS1-203ENST00000507004 SIX5Q8N196 739 aa15.71■□□□□ 0.11
HMGCS1-203ENST00000507004 ELMOD1Q8N336 334 aa15.71■□□□□ 0.11
HMGCS1-203ENST00000507004 FEZF2Q8TBJ5 459 aa15.71■□□□□ 0.11
HMGCS1-203ENST00000507004 SMOC2Q9H3U7 446 aa15.71■□□□□ 0.11
HMGCS1-203ENST00000507004 ZSCAN16Q9H4T2 348 aaPredicted RBP15.71■□□□□ 0.11
HMGCS1-203ENST00000507004 BLOC1S4Q9NUP1 217 aa15.71■□□□□ 0.11
HMGCS1-203ENST00000507004 GDE1Q9NZC3 331 aa15.71■□□□□ 0.11
HMGCS1-203ENST00000507004 SEL1LQ9UBV2 794 aa15.71■□□□□ 0.11
HMGCS1-203ENST00000507004 DERAQ9Y315 318 aa15.71■□□□□ 0.11
HMGCS1-203ENST00000507004 TBC1D4O60343 1298 aa15.7■□□□□ 0.1
HMGCS1-203ENST00000507004 ADRB2P07550 413 aa15.7■□□□□ 0.1
HMGCS1-203ENST00000507004 PTPN2P17706 415 aa15.7■□□□□ 0.1
HMGCS1-203ENST00000507004 GTF2BQ00403 316 aa15.7■□□□□ 0.1
HMGCS1-203ENST00000507004 KARSQ15046 597 aaKnown RBP15.7■□□□□ 0.1
HMGCS1-203ENST00000507004 POSTNQ15063 836 aa15.7■□□□□ 0.1
HMGCS1-203ENST00000507004 CTXN3Q4LDR2 81 aa15.7■□□□□ 0.1
HMGCS1-203ENST00000507004 CWF19L1Q69YN2 538 aaKnown RBP15.7■□□□□ 0.1
HMGCS1-203ENST00000507004 MAP4K3Q8IVH8 894 aa15.7■□□□□ 0.1
HMGCS1-203ENST00000507004 DDX12PQ92771 950 aa15.7■□□□□ 0.1
HMGCS1-203ENST00000507004 FGF13Q92913 245 aa15.7■□□□□ 0.1
HMGCS1-203ENST00000507004 KIF12Q96FN5 646 aa15.7■□□□□ 0.1
HMGCS1-203ENST00000507004 AFF4Q9UHB7 1163 aaKnown RBP15.7■□□□□ 0.1
HMGCS1-203ENST00000507004 FBXL5Q9UKA1 691 aa15.7■□□□□ 0.1
HMGCS1-203ENST00000507004 MRPS23Q9Y3D9 190 aaKnown RBP15.7■□□□□ 0.1
HMGCS1-203ENST00000507004 SRPRBQ9Y5M8 271 aaKnown RBP15.7■□□□□ 0.1
HMGCS1-203ENST00000507004 NUMBLQ9Y6R0 609 aa15.7■□□□□ 0.1
HMGCS1-203ENST00000507004 A0A0B4J269 797 aa15.69■□□□□ 0.1
HMGCS1-203ENST00000507004 PROB1E7EW31 1015 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms