RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 IFT122Q9HBG6 1241 aa5.36□□□□□ -1.55
CALCOCO2-208ENST00000506971 DMRT3Q9NQL9 472 aa5.36□□□□□ -1.55
CALCOCO2-208ENST00000506971 GNL3LQ9NVN8 582 aaKnown RBP5.36□□□□□ -1.55
CALCOCO2-208ENST00000506971 RNF181Q9P0P0 153 aa5.36□□□□□ -1.55
CALCOCO2-208ENST00000506971 ZNHIT2Q9UHR6 403 aa5.36□□□□□ -1.55
CALCOCO2-208ENST00000506971 ATP8A1Q9Y2Q0 1164 aa5.36□□□□□ -1.55
CALCOCO2-208ENST00000506971 DAPK1P53355 1430 aa5.36□□□□□ -1.55
CALCOCO2-208ENST00000506971 ARHGEF5Q12774 1597 aa5.36□□□□□ -1.55
CALCOCO2-208ENST00000506971 CEP170Q5SW79 1584 aa5.36□□□□□ -1.55
CALCOCO2-208ENST00000506971 CDC42BPAQ5VT25 1732 aa5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 ABCA8O94911 1581 aa5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 CDK13Q14004 1512 aaKnown RBP5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 KDM5DQ9BY66 1539 aa5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 RPRD2Q5VT52 1461 aaKnown RBP5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 CENPVL1A0A0U1RR11 272 aa5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 GRXCR1A8MXD5 290 aa5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 ZNF185O15231 689 aa5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 TSPAN6O43657 245 aa5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 GASTP01350 101 aa5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 OSMP13725 252 aa5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 CDKN1CP49918 316 aaPredicted RBP5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 CHN2P52757 468 aa5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 USP14P54578 494 aa5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 NFE2Q16621 373 aaPredicted RBP5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 PDCD4Q53EL6 469 aaKnown RBP5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 BRDTQ58F21 947 aaPredicted RBP5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 BTNL9Q6UXG8 535 aa5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 WDR75Q8IWA0 830 aaKnown RBP5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 PQLC1Q8N2U9 271 aa5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 PPM1NQ8N819 430 aa5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 CPEB3Q8NE35 698 aaKnown RBP5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 GPR156Q8NFN8 814 aa5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 SLC35B2Q8TB61 432 aa5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 FATE1Q969F0 183 aa5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 LENG9Q96B70 501 aa5.35□□□□□ -1.55
CALCOCO2-208ENST00000506971 ARHGEF12Q9NZN5 1544 aa5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 KDM5BQ9UGL1 1544 aa5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 PTPRKQ15262 1439 aa5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 B3GALT2O43825 422 aa5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 KRT18P05783 430 aaKnown RBP5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 HLA-DOAP06340 250 aa5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 MTHFD2P13995 350 aa5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 GSPT1P15170 499 aaKnown RBP5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 KRT4P19013 534 aa5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 CRHR1P34998 444 aa5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 EVA1CP58658 441 aa5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 NANOS3P60323 173 aaKnown RBP5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 GUCY1B3Q02153 619 aa5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 MUM1L1Q5H9M0 696 aa5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 METTL24Q5JXM2 366 aa5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 TSHZ3Q63HK5 1081 aa5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 CLEC4GQ6UXB4 293 aa5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 MED25Q71SY5 747 aa5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 PLXDC1Q8IUK5 500 aa5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 SYT12Q8IV01 421 aa5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 WDR66Q8TBY9 1149 aa5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 COG1Q8WTW3 980 aa5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 TSR2Q969E8 191 aaKnown RBP5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 FAM126AQ9BYI3 521 aaPredicted RBP5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 RIOX1Q9H6W3 641 aa5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 TESQ9UGI8 421 aaKnown RBP5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 PNMA2Q9UL42 364 aa5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 ATP11BQ9Y2G3 1177 aa5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 PCDHGA2Q9Y5H1 932 aa5.34□□□□□ -1.55
CALCOCO2-208ENST00000506971 PREX2Q70Z35 1606 aa5.34□□□□□ -1.56
CALCOCO2-208ENST00000506971 ZNF608Q9ULD9 1512 aaPredicted RBP5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 CAMSAP2Q08AD1 1489 aa5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 WDHD1O75717 1129 aaPredicted RBP5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 MYL1P05976 194 aa5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 CLRN1P58418 232 aa5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 MRPS9P82933 396 aaKnown RBP5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 RESTQ13127 1097 aa5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 DHX8Q14562 1220 aaKnown RBP5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 PPP2R5AQ15172 486 aa5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 BMT2Q1RMZ1 405 aa5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 HECTD2Q5U5R9 776 aa5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 LHFPL2Q6ZUX7 228 aa5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 AMOTL1Q8IY63 956 aa5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 TMTC2Q8N394 836 aa5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 BEND2Q8NDZ0 799 aa5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 CCHCR1Q8TD31 782 aa5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 TSPEARQ8WU66 669 aa5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 SLC39A13Q96H72 371 aa5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 SLC2A13Q96QE2 648 aa5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 SENP7Q9BQF6 1050 aa5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 REXO4Q9GZR2 422 aaKnown RBP5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 ZNF700Q9H0M5 742 aa5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 MCM8Q9UJA3 840 aa5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 RUVBL1Q9Y265 456 aaKnown RBP5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 MAST1Q9Y2H9 1570 aa5.33□□□□□ -1.56
CALCOCO2-208ENST00000506971 TEX14Q8IWB6 1497 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 WASHC2AQ641Q2 1341 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 CCDC189A1A4V9 331 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 DRGXA6NNA5 263 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 CXorf49A8MYA2 514 aaPredicted RBP5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 IFRD1O00458 451 aaPredicted RBP5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 ANP32CO43423 234 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 ALDH1L1O75891 902 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 RHOBTB3O94955 611 aa5.32□□□□□ -1.56
CALCOCO2-208ENST00000506971 LDHAP00338 332 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms