RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 CACNG4Q9UBN1 327 aa15.04■□□□□ -0
SERF1B-204ENST00000506542 DNAJB4Q9UDY4 337 aa15.04■□□□□ -0
SERF1B-204ENST00000506542 MUC3AQ02505 3323 aa15.04■□□□□ -0
SERF1B-204ENST00000506542 CNTNAP2Q9UHC6 1331 aa15.04■□□□□ -0
SERF1B-204ENST00000506542 A0A1B0GUA9 196 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 K7ERI5 159 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 HNRNPDLO14979 420 aaKnown RBP15.03■□□□□ -0
SERF1B-204ENST00000506542 EOMESO95936 686 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 POMCP01189 267 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 PIGRP01833 764 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 AFPP02771 609 aaKnown RBP15.03■□□□□ -0
SERF1B-204ENST00000506542 IRS1P35568 1242 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 MLH1P40692 756 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 KLK7P49862 253 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 EFNA5P52803 228 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 MAPK6Q16659 721 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 COLGALT1Q8NBJ5 622 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 CCDC51Q96ER9 411 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 PCIF1Q9H4Z3 704 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 TBC1D13Q9NVG8 400 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 PRMT7Q9NVM4 692 aaPredicted RBP15.03■□□□□ -0
SERF1B-204ENST00000506542 MIOSQ9NXC5 875 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 PLAGL2Q9UPG8 496 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 TTC26A0AVF1 554 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 C5orf67F2Z3F1 127 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 ZNF623O75123 536 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 TRIM21P19474 475 aaKnown RBP15.03■□□□□ -0
SERF1B-204ENST00000506542 GARTP22102 1010 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 DCAF17Q5H9S7 520 aaPredicted RBP15.03■□□□□ -0
SERF1B-204ENST00000506542 SLC27A1Q6PCB7 646 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 MRPL10Q7Z7H8 261 aaKnown RBP15.03■□□□□ -0
SERF1B-204ENST00000506542 TMEM139Q8IV31 216 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 BCL7CQ8WUZ0 217 aaPredicted RBP15.03■□□□□ -0
SERF1B-204ENST00000506542 RABGGTAQ92696 567 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 BICD1Q96G01 975 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 ZBTB45Q96K62 511 aaPredicted RBP15.03■□□□□ -0
SERF1B-204ENST00000506542 PCMTD1Q96MG8 357 aaPredicted RBP15.03■□□□□ -0
SERF1B-204ENST00000506542 GAD1Q99259 594 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 TARS2Q9BW92 718 aaKnown RBP15.03■□□□□ -0
SERF1B-204ENST00000506542 C2orf40Q9H1Z8 148 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 CAPN11Q9UMQ6 739 aa15.03■□□□□ -0
SERF1B-204ENST00000506542 F8W810 466 aa15.02□□□□□ -0.01
SERF1B-204ENST00000506542 RNF225M0QZC1 329 aaPredicted RBP15.02□□□□□ -0.01
SERF1B-204ENST00000506542 ACKR2O00590 384 aa15.02□□□□□ -0.01
SERF1B-204ENST00000506542 ZNF500O60304 480 aaPredicted RBP15.02□□□□□ -0.01
SERF1B-204ENST00000506542 ZC3H11AO75152 810 aaKnown RBP eCLIP15.02□□□□□ -0.01
SERF1B-204ENST00000506542 DDHD2O94830 711 aa15.02□□□□□ -0.01
SERF1B-204ENST00000506542 ITGA4P13612 1032 aa15.02□□□□□ -0.01
SERF1B-204ENST00000506542 GTF2F1P35269 517 aaKnown RBP eCLIP15.02□□□□□ -0.01
SERF1B-204ENST00000506542 LIG4P49917 911 aa15.02□□□□□ -0.01
SERF1B-204ENST00000506542 RAB27AP51159 221 aa15.02□□□□□ -0.01
SERF1B-204ENST00000506542 KCNMA1Q12791 1236 aa15.02□□□□□ -0.01
SERF1B-204ENST00000506542 BFSP1Q12934 665 aa15.02□□□□□ -0.01
SERF1B-204ENST00000506542 FAM187BQ17R55 369 aa15.02□□□□□ -0.01
SERF1B-204ENST00000506542 TCERG1LQ5VWI1 586 aa15.02□□□□□ -0.01
SERF1B-204ENST00000506542 INTS8Q75QN2 995 aaKnown RBP15.02□□□□□ -0.01
SERF1B-204ENST00000506542 ZBTB33Q86T24 672 aa15.02□□□□□ -0.01
SERF1B-204ENST00000506542 LRRC43Q8N309 656 aa15.02□□□□□ -0.01
SERF1B-204ENST00000506542 CEP120Q8N960 986 aa15.02□□□□□ -0.01
SERF1B-204ENST00000506542 SPPL3Q8TCT6 385 aa15.02□□□□□ -0.01
SERF1B-204ENST00000506542 FBXL18Q96ME1 805 aa15.02□□□□□ -0.01
SERF1B-204ENST00000506542 TRIM6Q9C030 488 aaPredicted RBP15.02□□□□□ -0.01
SERF1B-204ENST00000506542 RSAD1Q9HA92 442 aa15.02□□□□□ -0.01
SERF1B-204ENST00000506542 STYXL1Q9Y6J8 313 aa15.02□□□□□ -0.01
SERF1B-204ENST00000506542 A0A1W2PQJ5 194 aa15.01□□□□□ -0.01
SERF1B-204ENST00000506542 GTPBP10A4D1E9 387 aaKnown RBP15.01□□□□□ -0.01
SERF1B-204ENST00000506542 ARL5CA6NH57 179 aa15.01□□□□□ -0.01
SERF1B-204ENST00000506542 STX10O60499 249 aa15.01□□□□□ -0.01
SERF1B-204ENST00000506542 HARSP12081 509 aaKnown RBP15.01□□□□□ -0.01
SERF1B-204ENST00000506542 FECHP22830 423 aa15.01□□□□□ -0.01
SERF1B-204ENST00000506542 AXLP30530 894 aa15.01□□□□□ -0.01
SERF1B-204ENST00000506542 KRT9P35527 623 aa15.01□□□□□ -0.01
SERF1B-204ENST00000506542 SCNN1GP51170 649 aa15.01□□□□□ -0.01
SERF1B-204ENST00000506542 MCCD1P59942 119 aaPredicted RBP15.01□□□□□ -0.01
SERF1B-204ENST00000506542 OSTNP61366 133 aa15.01□□□□□ -0.01
SERF1B-204ENST00000506542 TFF2Q03403 129 aa15.01□□□□□ -0.01
SERF1B-204ENST00000506542 SKIV2LQ15477 1246 aaKnown RBP15.01□□□□□ -0.01
SERF1B-204ENST00000506542 SEZ6Q53EL9 994 aa15.01□□□□□ -0.01
SERF1B-204ENST00000506542 NOMO2Q5JPE7 1267 aa15.01□□□□□ -0.01
SERF1B-204ENST00000506542 KCNT2Q6UVM3 1135 aa15.01□□□□□ -0.01
SERF1B-204ENST00000506542 GLB1LQ6UWU2 654 aa15.01□□□□□ -0.01
SERF1B-204ENST00000506542 THNSL1Q8IYQ7 743 aa15.01□□□□□ -0.01
SERF1B-204ENST00000506542 RDH13Q8NBN7 331 aa15.01□□□□□ -0.01
SERF1B-204ENST00000506542 ZSWIM2Q8NEG5 633 aa15.01□□□□□ -0.01
SERF1B-204ENST00000506542 POF1BQ8WVV4 589 aa15.01□□□□□ -0.01
SERF1B-204ENST00000506542 POMGNT1Q8WZA1 660 aa15.01□□□□□ -0.01
SERF1B-204ENST00000506542 SAMD11Q96NU1 681 aa15.01□□□□□ -0.01
SERF1B-204ENST00000506542 BAG1Q99933 345 aaPredicted RBP15.01□□□□□ -0.01
SERF1B-204ENST00000506542 C11orf84Q9BUA3 381 aaPredicted RBP15.01□□□□□ -0.01
SERF1B-204ENST00000506542 NRDE2Q9H7Z3 1164 aa15.01□□□□□ -0.01
SERF1B-204ENST00000506542 SNTG2Q9NY99 539 aa15.01□□□□□ -0.01
SERF1B-204ENST00000506542 PARP2Q9UGN5 583 aa15.01□□□□□ -0.01
SERF1B-204ENST00000506542 LUC7L2Q9Y383 392 aaKnown RBP15.01□□□□□ -0.01
SERF1B-204ENST00000506542 KIAA0391O15091 583 aaKnown RBP15□□□□□ -0.01
SERF1B-204ENST00000506542 HOXA2O43364 376 aa15□□□□□ -0.01
SERF1B-204ENST00000506542 FGF18O76093 207 aa15□□□□□ -0.01
SERF1B-204ENST00000506542 ADRB2P07550 413 aa15□□□□□ -0.01
SERF1B-204ENST00000506542 KRT13P13646 458 aa15□□□□□ -0.01
SERF1B-204ENST00000506542 POU3F3P20264 500 aaPredicted RBP15□□□□□ -0.01
SERF1B-204ENST00000506542 BCAR1P56945 870 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms