RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 POLR3FQ9H1D9 316 aaPredicted RBP8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 RNF146Q9NTX7 359 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 MYPNQ86TC9 1320 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 TMEM120BA0PK00 339 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 DGAT1O75907 488 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 GJB6O95452 261 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 TTC4O95801 387 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 PSAPP07602 524 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 ATF2P15336 505 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 IBSPP21815 317 aaPredicted RBP8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 IVDP26440 423 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 NLRP11P59045 1033 aaKnown RBP8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 MCCD1P59942 119 aaPredicted RBP8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 GHRHRQ02643 423 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 MTERF2Q49AM1 385 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 LACTB2Q53H82 288 aaPredicted RBP8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 FAM133BQ5BKY9 247 aaKnown RBP8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 SNRNP48Q6IEG0 339 aaKnown RBP8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 CYB5D1Q6P9G0 228 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 TMEM270Q6UE05 265 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 ENOSF1Q7L5Y1 443 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 GSTA5Q7RTV2 222 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 CCDC60Q8IWA6 550 aaPredicted RBP8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 FUKQ8N0W3 1084 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 MTMR14Q8NCE2 650 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 ATL2Q8NHH9 583 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 GDAP1Q8TB36 358 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 TMEM143Q96AN5 459 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 DDX27Q96GQ7 796 aaKnown RBP8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 C11orf70Q9BRQ4 267 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 ROPN1BQ9BZX4 212 aaPredicted RBP8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 DCLK3Q9C098 648 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 C17orf75Q9HAS0 396 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 ROPN1Q9HAT0 212 aaPredicted RBP8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 CYP26B1Q9NR63 512 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 HOMER3Q9NSC5 361 aa8.12□□□□□ -1.11
PPARGC1A-204ENST00000506055 TCP11X1B4DZS4 312 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 EXTL3O43909 919 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 RGS20O76081 388 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 STBD1O95210 358 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 HLA-DRAP01903 254 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 CD58P19256 250 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 GARTP22102 1010 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 SLC1A1P43005 524 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 PRKCEQ02156 737 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 STRN3Q13033 797 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 SEZ6Q53EL9 994 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 TNFAIP8L3Q5GJ75 292 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 TDRD10Q5VZ19 366 aaKnown RBP8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 MFSD5Q6N075 450 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 ZNF365Q70YC5 407 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 PARP9Q8IXQ6 854 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 SAMD3Q8N6K7 520 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 MCPH1Q8NEM0 835 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 GRK7Q8WTQ7 553 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 SLCO2A1Q92959 643 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 ZBTB45Q96K62 511 aaPredicted RBP8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 FAM81BQ96LP2 452 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 SERPINB12Q96P63 405 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 ATP6V0A4Q9HBG4 840 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 JPH1Q9HDC5 661 aaPredicted RBP8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 XPNPEP1Q9NQW7 623 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 KLHL11Q9NVR0 708 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 ADAM22Q9P0K1 906 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 AGO2Q9UKV8 859 aaKnown RBP8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 FZD1Q9UP38 647 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 PCDHB4Q9Y5E5 795 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 PTPRJQ12913 1337 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 ZC3H11AO75152 810 aaKnown RBP eCLIP8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 PROSCO94903 275 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 GH1P01241 217 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 MYBL1P10243 752 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 KCNA2P16389 499 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 DPEP1P16444 411 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 DSG3P32926 999 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 NF2P35240 595 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 TAS2R40P59535 323 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 BPIFB4P59827 614 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 ACTR2P61160 394 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 PTK6Q13882 451 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 ZNF568Q3ZCX4 644 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 SWT1Q5T5J6 900 aaKnown RBP8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 KAZNQ674X7 775 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 NUGGCQ68CJ6 796 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 RHBDF2Q6PJF5 856 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 SEPT14Q6ZU15 432 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 NSUN6Q8TEA1 469 aaKnown RBP8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 MAIP1Q8WWC4 291 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 P3H4Q92791 437 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 ZKSCAN4Q969J2 545 aaPredicted RBP8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 TRIM11Q96F44 468 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 TEPSINQ96N21 525 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 TRAIPQ9BWF2 469 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 AVENQ9NQS1 362 aaPredicted RBP8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 PDLIM7Q9NR12 457 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 FGFR1OP2Q9NVK5 253 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 ANKFY1Q9P2R3 1169 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 SLC9A2Q9UBY0 812 aa8.11□□□□□ -1.11
PPARGC1A-204ENST00000506055 GSTTP1A0A1W2PQM5 241 aa8.1□□□□□ -1.11
PPARGC1A-204ENST00000506055 LRRIQ4A6NIV6 560 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms