RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 UPP1Q16831 310 aa10.9□□□□□ -0.66
NEDD9-210ENST00000505589 CDCA2Q69YH5 1023 aaPredicted RBP10.9□□□□□ -0.66
NEDD9-210ENST00000505589 PRR23CQ6ZRP0 262 aa10.9□□□□□ -0.66
NEDD9-210ENST00000505589 CENPQQ7L2Z9 268 aaPredicted RBP10.9□□□□□ -0.66
NEDD9-210ENST00000505589 HAUS6Q7Z4H7 955 aa10.9□□□□□ -0.66
NEDD9-210ENST00000505589 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.9□□□□□ -0.66
NEDD9-210ENST00000505589 CDR2LQ86X02 465 aaPredicted RBP10.9□□□□□ -0.66
NEDD9-210ENST00000505589 APPL2Q8NEU8 664 aa10.9□□□□□ -0.66
NEDD9-210ENST00000505589 ERMNQ8TAM6 284 aa10.9□□□□□ -0.66
NEDD9-210ENST00000505589 DEPTORQ8TB45 409 aa10.9□□□□□ -0.66
NEDD9-210ENST00000505589 ING5Q8WYH8 240 aa10.9□□□□□ -0.66
NEDD9-210ENST00000505589 RABGGTAQ92696 567 aa10.9□□□□□ -0.66
NEDD9-210ENST00000505589 ASB16Q96NS5 453 aa10.9□□□□□ -0.66
NEDD9-210ENST00000505589 CORO1BQ9BR76 489 aa10.9□□□□□ -0.66
NEDD9-210ENST00000505589 TRPV4Q9HBA0 871 aa10.9□□□□□ -0.66
NEDD9-210ENST00000505589 CYP4F11Q9HBI6 524 aa10.9□□□□□ -0.66
NEDD9-210ENST00000505589 TUFT1Q9NNX1 390 aa10.9□□□□□ -0.66
NEDD9-210ENST00000505589 HCFC1R1Q9NWW0 138 aa10.9□□□□□ -0.66
NEDD9-210ENST00000505589 KCNJ14Q9UNX9 436 aa10.9□□□□□ -0.66
NEDD9-210ENST00000505589 STK36Q9NRP7 1315 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 WDR87Q6ZQQ6 2873 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 PTGESO14684 152 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 CHADO15335 359 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 PRKCBP05771 671 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 MARCKSP29966 332 aaPredicted RBP10.89□□□□□ -0.67
NEDD9-210ENST00000505589 HOXA6P31267 233 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 KRT2P35908 639 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 TXKP42681 527 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 CLCNKBP51801 687 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 PLD1Q13393 1074 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 NAB2Q15742 525 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 NPY5RQ15761 445 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 CEP68Q76N32 757 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 MAP4K3Q8IVH8 894 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 C12orf50Q8NA57 414 aaPredicted RBP10.89□□□□□ -0.67
NEDD9-210ENST00000505589 PIGOQ8TEQ8 1089 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 EXOC4Q96A65 974 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 CCDC94Q9BW85 323 aaPredicted RBP10.89□□□□□ -0.67
NEDD9-210ENST00000505589 PLA2G2FQ9BZM2 168 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 PDZD7Q9H5P4 517 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 ASAH2Q9NR71 780 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 TPCN1Q9ULQ1 816 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 NUB1Q9Y5A7 615 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 STK24Q9Y6E0 443 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 PIAS3Q9Y6X2 628 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 MYH15Q9Y2K3 1946 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 CEP250Q9BV73 2442 aa10.89□□□□□ -0.67
NEDD9-210ENST00000505589 TPRP12270 2363 aaKnown RBP10.88□□□□□ -0.67
NEDD9-210ENST00000505589 CCDC163A0A0D9SF12 145 aa10.88□□□□□ -0.67
NEDD9-210ENST00000505589 K7ERI5 159 aa10.88□□□□□ -0.67
NEDD9-210ENST00000505589 ADAM12O43184 909 aa10.88□□□□□ -0.67
NEDD9-210ENST00000505589 USO1O60763 962 aaKnown RBP10.88□□□□□ -0.67
NEDD9-210ENST00000505589 ATG13O75143 517 aa10.88□□□□□ -0.67
NEDD9-210ENST00000505589 FGF19O95750 216 aa10.88□□□□□ -0.67
NEDD9-210ENST00000505589 CHRNB1P11230 501 aa10.88□□□□□ -0.67
NEDD9-210ENST00000505589 TDGF1P13385 188 aa10.88□□□□□ -0.67
NEDD9-210ENST00000505589 KPNA1P52294 538 aaPredicted RBP10.88□□□□□ -0.67
NEDD9-210ENST00000505589 AMPD2Q01433 879 aa10.88□□□□□ -0.67
NEDD9-210ENST00000505589 ROR1Q01973 937 aa10.88□□□□□ -0.67
NEDD9-210ENST00000505589 TOB2Q14106 344 aaPredicted RBP10.88□□□□□ -0.67
NEDD9-210ENST00000505589 ANKRD1Q15327 319 aa10.88□□□□□ -0.67
NEDD9-210ENST00000505589 FAM78AQ5JUQ0 283 aa10.88□□□□□ -0.67
NEDD9-210ENST00000505589 MAEAQ7L5Y9 396 aa10.88□□□□□ -0.67
NEDD9-210ENST00000505589 RALGPS2Q86X27 583 aaPredicted RBP10.88□□□□□ -0.67
NEDD9-210ENST00000505589 NOSTRINQ8IVI9 506 aa10.88□□□□□ -0.67
NEDD9-210ENST00000505589 KIFAP3Q92845 792 aa10.88□□□□□ -0.67
NEDD9-210ENST00000505589 PPP1R10Q96QC0 940 aaKnown RBP10.88□□□□□ -0.67
NEDD9-210ENST00000505589 PARD6AQ9NPB6 346 aa10.88□□□□□ -0.67
NEDD9-210ENST00000505589 AFF4Q9UHB7 1163 aaKnown RBP10.88□□□□□ -0.67
NEDD9-210ENST00000505589 ZMYM5Q9UJ78 669 aa10.88□□□□□ -0.67
NEDD9-210ENST00000505589 GDAQ9Y2T3 454 aa10.88□□□□□ -0.67
NEDD9-210ENST00000505589 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.88□□□□□ -0.67
NEDD9-210ENST00000505589 WDR27A2RRH5 827 aa10.87□□□□□ -0.67
NEDD9-210ENST00000505589 DPYSL4O14531 572 aa10.87□□□□□ -0.67
NEDD9-210ENST00000505589 NEMFO60524 1076 aa10.87□□□□□ -0.67
NEDD9-210ENST00000505589 ZNF806P0C7X5 589 aa10.87□□□□□ -0.67
NEDD9-210ENST00000505589 CEBPBP17676 345 aa10.87□□□□□ -0.67
NEDD9-210ENST00000505589 CYP11B2P19099 503 aa10.87□□□□□ -0.67
NEDD9-210ENST00000505589 CCNE1P24864 410 aa10.87□□□□□ -0.67
NEDD9-210ENST00000505589 TKTP29401 623 aaKnown RBP10.87□□□□□ -0.67
NEDD9-210ENST00000505589 PLCB2Q00722 1185 aa10.87□□□□□ -0.67
NEDD9-210ENST00000505589 STK3Q13188 491 aa10.87□□□□□ -0.67
NEDD9-210ENST00000505589 PTGDRQ13258 359 aa10.87□□□□□ -0.67
NEDD9-210ENST00000505589 TRIM29Q14134 588 aa10.87□□□□□ -0.67
NEDD9-210ENST00000505589 GRM2Q14416 872 aa10.87□□□□□ -0.67
NEDD9-210ENST00000505589 AASDHQ4L235 1098 aaPredicted RBP10.87□□□□□ -0.67
NEDD9-210ENST00000505589 PRSS36Q5K4E3 855 aa10.87□□□□□ -0.67
NEDD9-210ENST00000505589 ATF7IP2Q5U623 682 aa10.87□□□□□ -0.67
NEDD9-210ENST00000505589 ZNF280DQ6N043 979 aa10.87□□□□□ -0.67
NEDD9-210ENST00000505589 ZNF687Q8N1G0 1237 aa10.87□□□□□ -0.67
NEDD9-210ENST00000505589 POLR3CQ9BUI4 534 aaPredicted RBP10.87□□□□□ -0.67
NEDD9-210ENST00000505589 SLITRK6Q9H5Y7 841 aa10.87□□□□□ -0.67
NEDD9-210ENST00000505589 PDRG1Q9NUG6 133 aa10.87□□□□□ -0.67
NEDD9-210ENST00000505589 TNFSF13BQ9Y275 285 aa10.87□□□□□ -0.67
NEDD9-210ENST00000505589 RBM19Q9Y4C8 960 aaKnown RBP10.87□□□□□ -0.67
NEDD9-210ENST00000505589 INSL5Q9Y5Q6 135 aa10.87□□□□□ -0.67
NEDD9-210ENST00000505589 SMIM28A0A1B0GU29 152 aa10.86□□□□□ -0.67
NEDD9-210ENST00000505589 ARHGEF35A5YM69 484 aa10.86□□□□□ -0.67
NEDD9-210ENST00000505589 PAX3P23760 479 aa10.86□□□□□ -0.67
NEDD9-210ENST00000505589 ALDH1A3P47895 512 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms