RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 SMYD5Q6GMV2 418 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 SARM1Q6SZW1 724 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 C15orf39Q6ZRI6 1047 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 GAS2L3Q86XJ1 694 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 HERC6Q8IVU3 1022 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 EFCAB13Q8IY85 973 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 ZNF689Q96CS4 500 aaPredicted RBP11.09□□□□□ -0.63
RFC1-210ENST00000505077 DDX27Q96GQ7 796 aaKnown RBP11.09□□□□□ -0.63
RFC1-210ENST00000505077 YME1L1Q96TA2 773 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 TMEM175Q9BSA9 504 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 MTMR12Q9C0I1 747 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 NDST4Q9H3R1 872 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 TBC1D13Q9NVG8 400 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 KLK14Q9P0G3 267 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 CXXC1Q9P0U4 656 aaPredicted RBP11.09□□□□□ -0.63
RFC1-210ENST00000505077 INSL6Q9Y581 213 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 PTPRDP23468 1912 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 CHD9Q3L8U1 2897 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 PTPRJQ12913 1337 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 A0A1W2PPC1 479 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 LGALS16A8MUM7 142 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 CBFA2T2O43439 604 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 UPP2O95045 317 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 STAU1O95793 577 aaKnown RBP11.08□□□□□ -0.64
RFC1-210ENST00000505077 TRIM49P0CI25 452 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 TRIM49CP0CI26 452 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 ATP1A3P13637 1013 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 LRPAP1P30533 357 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 RPL9P32969 192 aaKnown RBP11.08□□□□□ -0.64
RFC1-210ENST00000505077 PNPLA4P41247 253 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 FMO5P49326 533 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 COPB1P53618 953 aaKnown RBP11.08□□□□□ -0.64
RFC1-210ENST00000505077 WNT7BP56706 349 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 DLG4P78352 724 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 TFAMQ00059 246 aaKnown RBP11.08□□□□□ -0.64
RFC1-210ENST00000505077 MYL7Q01449 175 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 DSC1Q08554 894 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 KCNH2Q12809 1159 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 BIRC3Q13489 604 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 HSP90AA4PQ58FG1 418 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 MIIPQ5JXC2 388 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 GLRA4Q5JXX5 417 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 C1orf220Q5T0J3 134 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 FKBP15Q5T1M5 1219 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 APTXQ7Z2E3 356 aaKnown RBP11.08□□□□□ -0.64
RFC1-210ENST00000505077 LRRC52Q8N7C0 313 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 CCDC150Q8NCX0 1101 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 FBXL13Q8NEE6 735 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 PLEKHO2Q8TD55 490 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 SP7Q8TDD2 431 aaPredicted RBP11.08□□□□□ -0.64
RFC1-210ENST00000505077 TAF4BQ92750 862 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 FAXDC2Q96IV6 333 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 ZNF560Q96MR9 790 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 ZMAT2Q96NC0 199 aaKnown RBP11.08□□□□□ -0.64
RFC1-210ENST00000505077 CASD1Q96PB1 797 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 RAD9AQ99638 391 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 ZBED2Q9BTP6 218 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 IMPG2Q9BZV3 1241 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 RBSNQ9H1K0 784 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 DPP3Q9NY33 737 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 INPP5FQ9Y2H2 1132 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 COQ4Q9Y3A0 265 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 R3HCC1Q9Y3T6 440 aaKnown RBP11.08□□□□□ -0.64
RFC1-210ENST00000505077 RWDD3Q9Y3V2 267 aa11.08□□□□□ -0.64
RFC1-210ENST00000505077 MTCL1Q9Y4B5 1905 aaKnown RBP11.07□□□□□ -0.64
RFC1-210ENST00000505077 A0A1B0GTH6 734 aa11.07□□□□□ -0.64
RFC1-210ENST00000505077 TBKBP1A7MCY6 615 aa11.07□□□□□ -0.64
RFC1-210ENST00000505077 TMEM189-UBE2V1I3L0A0 370 aa11.07□□□□□ -0.64
RFC1-210ENST00000505077 ZC3H11AO75152 810 aaKnown RBP eCLIP11.07□□□□□ -0.64
RFC1-210ENST00000505077 SERPINC1P01008 464 aa11.07□□□□□ -0.64
RFC1-210ENST00000505077 POMCP01189 267 aa11.07□□□□□ -0.64
RFC1-210ENST00000505077 C4BPAP04003 597 aaKnown RBP11.07□□□□□ -0.64
RFC1-210ENST00000505077 IBSPP21815 317 aaPredicted RBP11.07□□□□□ -0.64
RFC1-210ENST00000505077 ATICP31939 592 aa11.07□□□□□ -0.64
RFC1-210ENST00000505077 GCLMP48507 274 aa11.07□□□□□ -0.64
RFC1-210ENST00000505077 PPP3CAQ08209 521 aa11.07□□□□□ -0.64
RFC1-210ENST00000505077 MYO1EQ12965 1108 aa11.07□□□□□ -0.64
RFC1-210ENST00000505077 BTG3Q14201 252 aaPredicted RBP11.07□□□□□ -0.64
RFC1-210ENST00000505077 SHHQ15465 462 aa11.07□□□□□ -0.64
RFC1-210ENST00000505077 C9orf50Q5SZB4 431 aa11.07□□□□□ -0.64
RFC1-210ENST00000505077 TDRD10Q5VZ19 366 aaKnown RBP11.07□□□□□ -0.64
RFC1-210ENST00000505077 SV2AQ7L0J3 742 aa11.07□□□□□ -0.64
RFC1-210ENST00000505077 TRAPPC11Q7Z392 1133 aa11.07□□□□□ -0.64
RFC1-210ENST00000505077 CREBRFQ8IUR6 639 aa11.07□□□□□ -0.64
RFC1-210ENST00000505077 TDHQ8IZJ6 230 aa11.07□□□□□ -0.64
RFC1-210ENST00000505077 C1orf127Q8N9H9 656 aa11.07□□□□□ -0.64
RFC1-210ENST00000505077 OR5B17Q8NGF7 314 aa11.07□□□□□ -0.64
RFC1-210ENST00000505077 FAM193BQ96PV7 902 aaPredicted RBP11.07□□□□□ -0.64
RFC1-210ENST00000505077 FAM124BQ9H5Z6 455 aaPredicted RBP11.07□□□□□ -0.64
RFC1-210ENST00000505077 VRTNQ9H8Y1 702 aa11.07□□□□□ -0.64
RFC1-210ENST00000505077 TAB2Q9NYJ8 693 aa11.07□□□□□ -0.64
RFC1-210ENST00000505077 STK39Q9UEW8 545 aa11.07□□□□□ -0.64
RFC1-210ENST00000505077 TUBGCP4Q9UGJ1 667 aa11.07□□□□□ -0.64
RFC1-210ENST00000505077 DAAM1Q9Y4D1 1078 aa11.07□□□□□ -0.64
RFC1-210ENST00000505077 CHD7Q9P2D1 2997 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 ANO9A1A5B4 782 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 ARHGEF37A1IGU5 675 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 GOLGA6L3A6NEY3 463 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 PES1O00541 588 aaKnown RBP11.06□□□□□ -0.64
RFC1-210ENST00000505077 TLL1O43897 1013 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms