RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 INHBAP08476 426 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 TMEM253P0C7T8 217 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 THPOP40225 353 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 TSPY1Q01534 308 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 CUL1Q13616 776 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 ZKSCAN8Q15776 578 aaPredicted RBP14.95□□□□□ -0.02
TCOF1-207ENST00000504761 SMTNL2Q2TAL5 461 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 GLE1Q53GS7 698 aaKnown RBP14.95□□□□□ -0.02
TCOF1-207ENST00000504761 NOTUMQ6P988 496 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 LRRC55Q6ZSA7 311 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 KAT5Q92993 513 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 ACP6Q9NPH0 428 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 RASGRF2O14827 1237 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 STAG3L1P0CL83 205 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 SLC12A2P55011 1212 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 TBX2Q13207 712 aaPredicted RBP14.95□□□□□ -0.02
TCOF1-207ENST00000504761 ZNF484Q5JVG2 852 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 MPZL3Q6UWV2 235 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 TRAPPC11Q7Z392 1133 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 DDX42Q86XP3 938 aaKnown RBP eCLIP14.95□□□□□ -0.02
TCOF1-207ENST00000504761 APPL2Q8NEU8 664 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 SAYSD1Q9NPB0 183 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 VAV3Q9UKW4 847 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 ARHGEF37A1IGU5 675 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 GAS2O43903 313 aaKnown RBP14.95□□□□□ -0.02
TCOF1-207ENST00000504761 CYP11B1P15538 503 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 C1orf228Q6PIY5 440 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 PDIK1LQ8N165 341 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 SPATA20Q8TB22 786 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 ZBED2Q9BTP6 218 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 INTS9Q9NV88 658 aaKnown RBP14.95□□□□□ -0.02
TCOF1-207ENST00000504761 PRKAG2Q9UGJ0 569 aa14.95□□□□□ -0.02
TCOF1-207ENST00000504761 STRNO43815 780 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 GJB1P08034 283 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 GGCXP38435 758 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 FCGRTP55899 365 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 BEX3Q00994 111 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 B4GALNT4Q76KP1 1039 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 VSIG1Q86XK7 387 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 NT5C1AQ9BXI3 368 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 CELF4Q9BZC1 486 aaKnown RBP14.94□□□□□ -0.02
TCOF1-207ENST00000504761 UVRAGQ9P2Y5 699 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 DIS3Q9Y2L1 958 aaKnown RBP14.94□□□□□ -0.02
TCOF1-207ENST00000504761 DOT1LQ8TEK3 1739 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 EXOC1LA0A1B0GW35 172 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 MYBL1P10243 752 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 PLCB4Q15147 1175 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 MICAL1Q8TDZ2 1067 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 SHISA4Q96DD7 197 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 TNIP3Q96KP6 325 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 GLT1D1Q96MS3 346 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 ABHD16BQ9H3Z7 469 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 ZBBXA8MT70 800 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 CPP00450 1065 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 ELF1P32519 619 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 RAP1GAPP47736 663 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 BCAR1P56945 870 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 PDE1BQ01064 536 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 PYROXD1Q8WU10 500 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 DNAJB3Q8WWF6 145 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 TBC1D31Q96DN5 1066 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 CYFIP2Q96F07 1278 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 PDGFCQ9NRA1 345 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 KCNH4Q9UQ05 1017 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 C17orf102A2RUQ5 167 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 IL18RAPO95256 599 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 KRT7P08729 469 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 PPP3CAQ08209 521 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 GPS1Q13098 491 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 TFDP2Q14188 446 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 ANO5Q75V66 913 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 ARHGEF19Q8IW93 802 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 PARD3BQ8TEW8 1205 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 MTMR8Q96EF0 704 aa14.94□□□□□ -0.02
TCOF1-207ENST00000504761 PRG3Q9Y2Y8 225 aaPredicted RBP14.94□□□□□ -0.02
TCOF1-207ENST00000504761 CCNE2O96020 404 aa14.93□□□□□ -0.02
TCOF1-207ENST00000504761 ITGA4P13612 1032 aa14.93□□□□□ -0.02
TCOF1-207ENST00000504761 CDC42EP1Q00587 391 aa14.93□□□□□ -0.02
TCOF1-207ENST00000504761 SLMAPQ14BN4 828 aa14.93□□□□□ -0.02
TCOF1-207ENST00000504761 ARL13BQ3SXY8 428 aa14.93□□□□□ -0.02
TCOF1-207ENST00000504761 FYB2Q5VWT5 728 aa14.93□□□□□ -0.02
TCOF1-207ENST00000504761 IRF2BP1Q8IU81 584 aa14.93□□□□□ -0.02
TCOF1-207ENST00000504761 FAF2Q96CS3 445 aa14.93□□□□□ -0.02
TCOF1-207ENST00000504761 WNK4Q96J92 1243 aa14.93□□□□□ -0.02
TCOF1-207ENST00000504761 PRDM5Q9NQX1 630 aaPredicted RBP14.93□□□□□ -0.02
TCOF1-207ENST00000504761 CALCAP01258 141 aa14.93□□□□□ -0.02
TCOF1-207ENST00000504761 TPCN2Q8NHX9 752 aa14.93□□□□□ -0.02
TCOF1-207ENST00000504761 ASAP3Q8TDY4 903 aa14.93□□□□□ -0.02
TCOF1-207ENST00000504761 CFAP36Q96G28 342 aa14.93□□□□□ -0.02
TCOF1-207ENST00000504761 ADAM33Q9BZ11 813 aa14.93□□□□□ -0.02
TCOF1-207ENST00000504761 ADCY3O60266 1144 aa14.93□□□□□ -0.02
TCOF1-207ENST00000504761 SLC26A2P50443 739 aa14.93□□□□□ -0.02
TCOF1-207ENST00000504761 HSD17B4P51659 736 aa14.93□□□□□ -0.02
TCOF1-207ENST00000504761 MNAT1P51948 309 aa14.93□□□□□ -0.02
TCOF1-207ENST00000504761 ACVR2BQ13705 512 aa14.93□□□□□ -0.02
TCOF1-207ENST00000504761 GRIK4Q16099 956 aa14.93□□□□□ -0.02
TCOF1-207ENST00000504761 KYAT1Q16773 422 aa14.93□□□□□ -0.02
TCOF1-207ENST00000504761 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.93□□□□□ -0.02
TCOF1-207ENST00000504761 ATP2A3Q93084 1043 aa14.93□□□□□ -0.02
TCOF1-207ENST00000504761 SMC6Q96SB8 1091 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms