RNA–Protein interactions for RNA: ENST00000504543.1

USP17L28-201, Transcript of ubiquitin specific peptidase 17-like family member 28, humanhuman

APPRIS P1 BASIC

Gene USP17L28, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L28-201ENST00000504543 PRKCBP05771 671 aa11.03□□□□□ -0.64
USP17L28-201ENST00000504543 ARF4P18085 180 aaPredicted RBP11.03□□□□□ -0.64
USP17L28-201ENST00000504543 GARTP22102 1010 aa11.03□□□□□ -0.64
USP17L28-201ENST00000504543 PON1P27169 355 aa11.03□□□□□ -0.64
USP17L28-201ENST00000504543 ARHGAP25P42331 645 aa11.03□□□□□ -0.64
USP17L28-201ENST00000504543 POLR2FP61218 127 aaKnown RBP11.03□□□□□ -0.64
USP17L28-201ENST00000504543 KLHDC7AQ5VTJ3 777 aa11.03□□□□□ -0.64
USP17L28-201ENST00000504543 SFMBT2Q5VUG0 894 aa11.03□□□□□ -0.64
USP17L28-201ENST00000504543 HGSNATQ68CP4 663 aa11.03□□□□□ -0.64
USP17L28-201ENST00000504543 ZPBP2Q6X784 338 aa11.03□□□□□ -0.64
USP17L28-201ENST00000504543 EHBP1Q8NDI1 1231 aa11.03□□□□□ -0.64
USP17L28-201ENST00000504543 TIFAQ96CG3 184 aa11.03□□□□□ -0.64
USP17L28-201ENST00000504543 CCDC42Q96M95 316 aa11.03□□□□□ -0.64
USP17L28-201ENST00000504543 FBXL18Q96ME1 805 aa11.03□□□□□ -0.64
USP17L28-201ENST00000504543 ZBED2Q9BTP6 218 aa11.03□□□□□ -0.64
USP17L28-201ENST00000504543 TSGA10Q9BZW7 698 aa11.03□□□□□ -0.64
USP17L28-201ENST00000504543 TMEM117Q9H0C3 514 aa11.03□□□□□ -0.64
USP17L28-201ENST00000504543 IKZF4Q9H2S9 585 aa11.03□□□□□ -0.64
USP17L28-201ENST00000504543 FAM105AQ9NUU6 356 aa11.03□□□□□ -0.64
USP17L28-201ENST00000504543 DNAI1Q9UI46 699 aa11.03□□□□□ -0.64
USP17L28-201ENST00000504543 PIN4Q9Y237 131 aaKnown RBP11.03□□□□□ -0.64
USP17L28-201ENST00000504543 TNFSF13BQ9Y275 285 aa11.03□□□□□ -0.64
USP17L28-201ENST00000504543 RWDD3Q9Y3V2 267 aa11.03□□□□□ -0.64
USP17L28-201ENST00000504543 ADGRA3Q8IWK6 1321 aa11.02□□□□□ -0.64
USP17L28-201ENST00000504543 RBAK-RBAKDNI3L0D1 243 aa11.02□□□□□ -0.65
USP17L28-201ENST00000504543 SOX1O00570 391 aaPredicted RBP11.02□□□□□ -0.65
USP17L28-201ENST00000504543 KRT86O43790 486 aa11.02□□□□□ -0.65
USP17L28-201ENST00000504543 SERPING1P05155 500 aa11.02□□□□□ -0.65
USP17L28-201ENST00000504543 UCHL3P15374 230 aa11.02□□□□□ -0.65
USP17L28-201ENST00000504543 KIF11P52732 1056 aa11.02□□□□□ -0.65
USP17L28-201ENST00000504543 VAV2P52735 878 aa11.02□□□□□ -0.65
USP17L28-201ENST00000504543 JAM2P57087 298 aa11.02□□□□□ -0.65
USP17L28-201ENST00000504543 GNG11P61952 73 aa11.02□□□□□ -0.65
USP17L28-201ENST00000504543 MYL7Q01449 175 aa11.02□□□□□ -0.65
USP17L28-201ENST00000504543 PRPF4BQ13523 1007 aaKnown RBP11.02□□□□□ -0.65
USP17L28-201ENST00000504543 ASTE1Q2TB18 679 aaPredicted RBP11.02□□□□□ -0.65
USP17L28-201ENST00000504543 DCAF4L1Q3SXM0 396 aa11.02□□□□□ -0.65
USP17L28-201ENST00000504543 UBXN11Q5T124 520 aa11.02□□□□□ -0.65
USP17L28-201ENST00000504543 TWF2Q6IBS0 349 aaKnown RBP11.02□□□□□ -0.65
USP17L28-201ENST00000504543 SLC27A1Q6PCB7 646 aa11.02□□□□□ -0.65
USP17L28-201ENST00000504543 HACE1Q8IYU2 909 aa11.02□□□□□ -0.65
USP17L28-201ENST00000504543 CLP1Q92989 425 aaKnown RBP11.02□□□□□ -0.65
USP17L28-201ENST00000504543 ZNF668Q96K58 619 aaPredicted RBP11.02□□□□□ -0.65
USP17L28-201ENST00000504543 CBWD1Q9BRT8 395 aa11.02□□□□□ -0.65
USP17L28-201ENST00000504543 CRACR2AQ9BSW2 395 aa11.02□□□□□ -0.65
USP17L28-201ENST00000504543 MRPL4Q9BYD3 311 aaKnown RBP11.02□□□□□ -0.65
USP17L28-201ENST00000504543 SIX2Q9NPC8 291 aa11.02□□□□□ -0.65
USP17L28-201ENST00000504543 LZTFL1Q9NQ48 299 aa11.02□□□□□ -0.65
USP17L28-201ENST00000504543 LRFN2Q9ULH4 789 aa11.02□□□□□ -0.65
USP17L28-201ENST00000504543 BZW2Q9Y6E2 419 aaKnown RBP11.02□□□□□ -0.65
USP17L28-201ENST00000504543 RANBP2P49792 3224 aaKnown RBP11.02□□□□□ -0.65
USP17L28-201ENST00000504543 RALGAPA2Q2PPJ7 1873 aa11.02□□□□□ -0.65
USP17L28-201ENST00000504543 FNDC1Q4ZHG4 1894 aaPredicted RBP11.02□□□□□ -0.65
USP17L28-201ENST00000504543 GRXCR1A8MXD5 290 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 FANCGO15287 622 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 CSDE1O75534 798 aaKnown RBP11.01□□□□□ -0.65
USP17L28-201ENST00000504543 RB1P06400 928 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 ATF7P17544 494 aaPredicted RBP11.01□□□□□ -0.65
USP17L28-201ENST00000504543 FGFR4P22455 802 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 PROZP22891 400 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 CASQ1P31415 396 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 PRKCIP41743 596 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 ERVK-21P61565 698 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 POU5F1Q01860 360 aaKnown RBP11.01□□□□□ -0.65
USP17L28-201ENST00000504543 TUBB2AQ13885 445 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 SPA17Q15506 151 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 ZNF697Q5TEC3 545 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 TAS1R3Q7RTX0 852 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 USP37Q86T82 979 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 WDR24Q96S15 920 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 ACO2Q99798 780 aaKnown RBP11.01□□□□□ -0.65
USP17L28-201ENST00000504543 ADPGKQ9BRR6 497 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 TUBB2BQ9BVA1 445 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 PLVAPQ9BX97 442 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 MRPL9Q9BYD2 267 aaKnown RBP11.01□□□□□ -0.65
USP17L28-201ENST00000504543 DEF6Q9H4E7 631 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 SLC28A3Q9HAS3 691 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 PTPRHQ9HD43 1115 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 NLRC4Q9NPP4 1024 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 LUC7LQ9NQ29 371 aaKnown RBP11.01□□□□□ -0.65
USP17L28-201ENST00000504543 KANSL3Q9P2N6 904 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 USP20Q9Y2K6 914 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 YBX2Q9Y2T7 364 aaKnown RBP11.01□□□□□ -0.65
USP17L28-201ENST00000504543 PCDHB2Q9Y5E7 798 aa11.01□□□□□ -0.65
USP17L28-201ENST00000504543 C5orf67F2Z3F1 127 aa11□□□□□ -0.65
USP17L28-201ENST00000504543 HNRNPDLO14979 420 aaKnown RBP11□□□□□ -0.65
USP17L28-201ENST00000504543 PJA2O43164 708 aa11□□□□□ -0.65
USP17L28-201ENST00000504543 TOM1L1O75674 476 aa11□□□□□ -0.65
USP17L28-201ENST00000504543 SLU7O95391 586 aaKnown RBP11□□□□□ -0.65
USP17L28-201ENST00000504543 TRIM49P0CI25 452 aa11□□□□□ -0.65
USP17L28-201ENST00000504543 TRIM49CP0CI26 452 aa11□□□□□ -0.65
USP17L28-201ENST00000504543 SLC9A1P19634 815 aa11□□□□□ -0.65
USP17L28-201ENST00000504543 POU3F3P20264 500 aaPredicted RBP11□□□□□ -0.65
USP17L28-201ENST00000504543 ADSSP30520 456 aa11□□□□□ -0.65
USP17L28-201ENST00000504543 EIF4A3P38919 411 aaKnown RBP11□□□□□ -0.65
USP17L28-201ENST00000504543 VAMP7P51809 220 aa11□□□□□ -0.65
USP17L28-201ENST00000504543 TAP1Q03518 808 aa11□□□□□ -0.65
USP17L28-201ENST00000504543 CETN1Q12798 172 aa11□□□□□ -0.65
USP17L28-201ENST00000504543 STRN3Q13033 797 aa11□□□□□ -0.65
USP17L28-201ENST00000504543 RAPGEF1Q13905 1077 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms