RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 TMEM260Q9NX78 707 aa2.97□□□□□ -1.93
HMGB3P17-201ENST00000504195 GPRC5DQ9NZD1 345 aa2.97□□□□□ -1.93
HMGB3P17-201ENST00000504195 FAM30AQ9NZY2 134 aa2.97□□□□□ -1.93
HMGB3P17-201ENST00000504195 MYMKA6NI61 221 aa2.96□□□□□ -1.94
HMGB3P17-201ENST00000504195 ZNF891A8MT65 544 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P17-201ENST00000504195 YY2O15391 372 aa2.96□□□□□ -1.94
HMGB3P17-201ENST00000504195 TGM5O43548 720 aa2.96□□□□□ -1.94
HMGB3P17-201ENST00000504195 RAB11FIP3O75154 756 aa2.96□□□□□ -1.94
HMGB3P17-201ENST00000504195 POU3F2P20265 443 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P17-201ENST00000504195 FGFR4P22455 802 aa2.96□□□□□ -1.94
HMGB3P17-201ENST00000504195 GCSHP23434 173 aa2.96□□□□□ -1.94
HMGB3P17-201ENST00000504195 SCNN1BP51168 640 aa2.96□□□□□ -1.94
HMGB3P17-201ENST00000504195 PHC1P78364 1004 aa2.96□□□□□ -1.94
HMGB3P17-201ENST00000504195 FHL3Q13643 280 aa2.96□□□□□ -1.94
HMGB3P17-201ENST00000504195 FAM153CQ494X1 144 aa2.96□□□□□ -1.94
HMGB3P17-201ENST00000504195 SLC44A4Q53GD3 710 aa2.96□□□□□ -1.94
HMGB3P17-201ENST00000504195 RRP12Q5JTH9 1297 aaKnown RBP2.96□□□□□ -1.94
HMGB3P17-201ENST00000504195 TSTD2Q5T7W7 516 aa2.96□□□□□ -1.94
HMGB3P17-201ENST00000504195 FRMD7Q6ZUT3 714 aa2.96□□□□□ -1.94
HMGB3P17-201ENST00000504195 OR14C36Q8NHC7 312 aa2.96□□□□□ -1.94
HMGB3P17-201ENST00000504195 MDM1Q8TC05 714 aa2.96□□□□□ -1.94
HMGB3P17-201ENST00000504195 NACC2Q96BF6 587 aa2.96□□□□□ -1.94
HMGB3P17-201ENST00000504195 TMEM79Q9BSE2 394 aa2.96□□□□□ -1.94
HMGB3P17-201ENST00000504195 PRSS50Q9UI38 385 aa2.96□□□□□ -1.94
HMGB3P17-201ENST00000504195 MTO1Q9Y2Z2 717 aaKnown RBP2.96□□□□□ -1.94
HMGB3P17-201ENST00000504195 LSSP48449 732 aa2.95□□□□□ -1.94
HMGB3P17-201ENST00000504195 MAPK10P53779 464 aa2.95□□□□□ -1.94
HMGB3P17-201ENST00000504195 TERF2Q15554 542 aa2.95□□□□□ -1.94
HMGB3P17-201ENST00000504195 GJC2Q5T442 439 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P17-201ENST00000504195 CNNM4Q6P4Q7 775 aa2.95□□□□□ -1.94
HMGB3P17-201ENST00000504195 MEPCEQ7L2J0 689 aaKnown RBP2.95□□□□□ -1.94
HMGB3P17-201ENST00000504195 LRRTM3Q86VH5 581 aa2.95□□□□□ -1.94
HMGB3P17-201ENST00000504195 KRT73Q86Y46 540 aa2.95□□□□□ -1.94
HMGB3P17-201ENST00000504195 HOMER1Q86YM7 354 aa2.95□□□□□ -1.94
HMGB3P17-201ENST00000504195 AHI1Q8N157 1196 aa2.95□□□□□ -1.94
HMGB3P17-201ENST00000504195 PPM1KQ8N3J5 372 aa2.95□□□□□ -1.94
HMGB3P17-201ENST00000504195 SMC1BQ8NDV3 1235 aa2.95□□□□□ -1.94
HMGB3P17-201ENST00000504195 SSH3Q8TE77 659 aa2.95□□□□□ -1.94
HMGB3P17-201ENST00000504195 CEP95Q96GE4 821 aa2.95□□□□□ -1.94
HMGB3P17-201ENST00000504195 GPR101Q96P66 508 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P17-201ENST00000504195 MED15Q96RN5 788 aa2.95□□□□□ -1.94
HMGB3P17-201ENST00000504195 ZSWIM1Q9BR11 485 aa2.95□□□□□ -1.94
HMGB3P17-201ENST00000504195 ANO3Q9BYT9 981 aa2.95□□□□□ -1.94
HMGB3P17-201ENST00000504195 ZSWIM4Q9H7M6 989 aa2.95□□□□□ -1.94
HMGB3P17-201ENST00000504195 KANSL2Q9H9L4 492 aa2.95□□□□□ -1.94
HMGB3P17-201ENST00000504195 EVLQ9UI08 416 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P17-201ENST00000504195 NOTCH4Q99466 2003 aa2.95□□□□□ -1.94
HMGB3P17-201ENST00000504195 TRGV11A0A075B6L2 103 aa2.94□□□□□ -1.94
HMGB3P17-201ENST00000504195 CXorf49A8MYA2 514 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P17-201ENST00000504195 PROM1O43490 865 aa2.94□□□□□ -1.94
HMGB3P17-201ENST00000504195 KDM1AO60341 852 aa2.94□□□□□ -1.94
HMGB3P17-201ENST00000504195 PHF2O75151 1096 aa2.94□□□□□ -1.94
HMGB3P17-201ENST00000504195 LATS1O95835 1130 aa2.94□□□□□ -1.94
HMGB3P17-201ENST00000504195 SRGNP10124 158 aa2.94□□□□□ -1.94
HMGB3P17-201ENST00000504195 EPHB2P29323 1055 aa2.94□□□□□ -1.94
HMGB3P17-201ENST00000504195 NR4A2P43354 598 aa2.94□□□□□ -1.94
HMGB3P17-201ENST00000504195 MANFP55145 182 aaKnown RBP2.94□□□□□ -1.94
HMGB3P17-201ENST00000504195 IL2P60568 153 aa2.94□□□□□ -1.94
HMGB3P17-201ENST00000504195 PTPRRQ15256 657 aa2.94□□□□□ -1.94
HMGB3P17-201ENST00000504195 MFSD14BQ5SR56 506 aa2.94□□□□□ -1.94
HMGB3P17-201ENST00000504195 VWA1Q6PCB0 445 aa2.94□□□□□ -1.94
HMGB3P17-201ENST00000504195 PEG10Q86TG7 708 aaKnown RBP2.94□□□□□ -1.94
HMGB3P17-201ENST00000504195 OR2W6PQ8NHA6 318 aa2.94□□□□□ -1.94
HMGB3P17-201ENST00000504195 ZNF480Q8WV37 535 aa2.94□□□□□ -1.94
HMGB3P17-201ENST00000504195 NINJ1Q92982 152 aa2.94□□□□□ -1.94
HMGB3P17-201ENST00000504195 SPTLC3Q9NUV7 552 aa2.94□□□□□ -1.94
HMGB3P17-201ENST00000504195 ELOVL5Q9NYP7 299 aa2.94□□□□□ -1.94
HMGB3P17-201ENST00000504195 CD2APQ9Y5K6 639 aa2.94□□□□□ -1.94
HMGB3P17-201ENST00000504195 PPP2R3BQ9Y5P8 575 aa2.94□□□□□ -1.94
HMGB3P17-201ENST00000504195 LCHNA4D1U4 455 aa2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 TMEM127O75204 238 aa2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 POMCP01189 267 aa2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 CTSSP25774 331 aa2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 ZNF134P52741 427 aa2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 HSD11B2P80365 405 aa2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 C21orf62-AS1Q17RA5 79 aa2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 PRAMEF14Q5SWL7 426 aa2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 ABHD15Q6UXT9 468 aa2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 C16orf86Q6ZW13 317 aa2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 ZNF572Q7Z3I7 529 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 LYSMD2Q8IV50 215 aa2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 FOXP4Q8IVH2 680 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 NIM1KQ8IY84 436 aa2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 KRT78Q8N1N4 520 aa2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 SLC35B2Q8TB61 432 aa2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 SREK1Q8WXA9 508 aaKnown RBP2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 PGBD1Q96JS3 809 aa2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 MS4A5Q9H3V2 200 aa2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 TUBA8Q9NY65 449 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 TMPRSS11EQ9UL52 423 aa2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 PADI4Q9UM07 663 aa2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 PROCRQ9UNN8 238 aa2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 NOC2LQ9Y3T9 749 aaKnown RBP2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 PCDHB1Q9Y5F3 818 aa2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 CDY2AQ9Y6F7 541 aa2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 RPTORQ8N122 1335 aa2.93□□□□□ -1.94
HMGB3P17-201ENST00000504195 FAM83GA6ND36 823 aa2.92□□□□□ -1.94
HMGB3P17-201ENST00000504195 FKBP9O95302 570 aa2.92□□□□□ -1.94
HMGB3P17-201ENST00000504195 PTPN7P35236 360 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms