RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 PPP4R3CPQ6ZMV5 832 aa17.47■□□□□ 0.39
PDLIM7-210ENST00000503827 Q6ZS52 159 aa17.47■□□□□ 0.39
PDLIM7-210ENST00000503827 CACNA2D4Q7Z3S7 1137 aa17.47■□□□□ 0.39
PDLIM7-210ENST00000503827 KRT25Q7Z3Z0 450 aa17.47■□□□□ 0.39
PDLIM7-210ENST00000503827 YAF2Q8IY57 180 aa17.47■□□□□ 0.39
PDLIM7-210ENST00000503827 ELMOD1Q8N336 334 aa17.47■□□□□ 0.39
PDLIM7-210ENST00000503827 DAGLBQ8NCG7 672 aa17.47■□□□□ 0.39
PDLIM7-210ENST00000503827 ZSCAN18Q8TBC5 510 aaPredicted RBP17.47■□□□□ 0.39
PDLIM7-210ENST00000503827 ZSWIM3Q96MP5 696 aa17.47■□□□□ 0.39
PDLIM7-210ENST00000503827 CCDC43Q96MW1 224 aaKnown RBP17.47■□□□□ 0.39
PDLIM7-210ENST00000503827 CYP4F11Q9HBI6 524 aa17.47■□□□□ 0.39
PDLIM7-210ENST00000503827 CEP295Q9C0D2 2601 aa17.46■□□□□ 0.39
PDLIM7-210ENST00000503827 LRRIQ4A6NIV6 560 aa17.46■□□□□ 0.39
PDLIM7-210ENST00000503827 TBX3O15119 743 aa17.46■□□□□ 0.39
PDLIM7-210ENST00000503827 ABLIM3O94929 683 aa17.46■□□□□ 0.39
PDLIM7-210ENST00000503827 ATF2P15336 505 aa17.46■□□□□ 0.39
PDLIM7-210ENST00000503827 GCFC2P16383 781 aaKnown RBP17.46■□□□□ 0.39
PDLIM7-210ENST00000503827 CCR2P41597 374 aa17.46■□□□□ 0.39
PDLIM7-210ENST00000503827 PPP4R3AQ6IN85 833 aa17.46■□□□□ 0.39
PDLIM7-210ENST00000503827 GALNT17Q6IS24 598 aa17.46■□□□□ 0.39
PDLIM7-210ENST00000503827 SLC8B1Q6J4K2 584 aa17.46■□□□□ 0.39
PDLIM7-210ENST00000503827 TCEAL8Q8IYN2 117 aa17.46■□□□□ 0.39
PDLIM7-210ENST00000503827 FAM200AQ8TCP9 573 aa17.46■□□□□ 0.39
PDLIM7-210ENST00000503827 GAB3Q8WWW8 586 aa17.46■□□□□ 0.39
PDLIM7-210ENST00000503827 E2F7Q96AV8 911 aa17.46■□□□□ 0.39
PDLIM7-210ENST00000503827 ZNF512Q96ME7 567 aaPredicted RBP17.46■□□□□ 0.39
PDLIM7-210ENST00000503827 ADPGKQ9BRR6 497 aa17.46■□□□□ 0.39
PDLIM7-210ENST00000503827 POLR3FQ9H1D9 316 aaPredicted RBP17.46■□□□□ 0.39
PDLIM7-210ENST00000503827 CXCL16Q9H2A7 254 aa17.46■□□□□ 0.39
PDLIM7-210ENST00000503827 TRPV4Q9HBA0 871 aa17.46■□□□□ 0.39
PDLIM7-210ENST00000503827 INSL5Q9Y5Q6 135 aa17.46■□□□□ 0.39
PDLIM7-210ENST00000503827 TMEM8BA6NDV4 472 aa17.45■□□□□ 0.38
PDLIM7-210ENST00000503827 SLC38A8A6NNN8 435 aa17.45■□□□□ 0.38
PDLIM7-210ENST00000503827 HEPACAM2A8MVW5 462 aa17.45■□□□□ 0.38
PDLIM7-210ENST00000503827 ARNTLO00327 626 aa17.45■□□□□ 0.38
PDLIM7-210ENST00000503827 CLCNKBP51801 687 aa17.45■□□□□ 0.38
PDLIM7-210ENST00000503827 ARPP19P56211 112 aa17.45■□□□□ 0.38
PDLIM7-210ENST00000503827 CCT2P78371 535 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-210ENST00000503827 SSRP1Q08945 709 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-210ENST00000503827 RNF43Q68DV7 783 aa17.45■□□□□ 0.38
PDLIM7-210ENST00000503827 NEK8Q86SG6 692 aa17.45■□□□□ 0.38
PDLIM7-210ENST00000503827 ZBTB8OSQ8IWT0 167 aa17.45■□□□□ 0.38
PDLIM7-210ENST00000503827 HAS1Q92839 578 aa17.45■□□□□ 0.38
PDLIM7-210ENST00000503827 UROC1Q96N76 676 aa17.45■□□□□ 0.38
PDLIM7-210ENST00000503827 GPR88Q9GZN0 384 aa17.45■□□□□ 0.38
PDLIM7-210ENST00000503827 PDZD7Q9H5P4 517 aa17.45■□□□□ 0.38
PDLIM7-210ENST00000503827 ANKEF1Q9NU02 776 aa17.45■□□□□ 0.38
PDLIM7-210ENST00000503827 PCDHGA5Q9Y5G8 931 aa17.45■□□□□ 0.38
PDLIM7-210ENST00000503827 EML5Q05BV3 1969 aa17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 KIF26AQ9ULI4 1882 aaPredicted RBP17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 I3L4J1 428 aa17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 CHADO15335 359 aa17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 RPP40O75818 363 aaKnown RBP17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 SLITRK3O94933 977 aa17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 CCDC192P0DO97 292 aa17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 MYL4P12829 197 aa17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 RAP1GAPP47736 663 aa17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 SOX9P48436 509 aa17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 NOVA1P51513 510 aaKnown RBP17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 FOXC1Q12948 553 aa17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 FAM187BQ17R55 369 aa17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 PLA2G2CQ5R387 149 aa17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 BLOC1S2Q6QNY1 142 aa17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 RALGPS2Q86X27 583 aaPredicted RBP17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 NOSTRINQ8IVI9 506 aa17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 HS6ST3Q8IZP7 471 aa17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 FAM177A1Q8N128 213 aaPredicted RBP17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 SYNPOQ8N3V7 929 aa17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 LEMD2Q8NC56 503 aa17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 NAP1L4Q99733 375 aaKnown RBP17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 FZD8Q9H461 694 aa17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 NCOA5Q9HCD5 579 aaKnown RBP17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 VPS45Q9NRW7 570 aa17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 C2orf42Q9NWW7 574 aa17.44■□□□□ 0.38
PDLIM7-210ENST00000503827 CCDC194A0A1B0GVG4 234 aa17.43■□□□□ 0.38
PDLIM7-210ENST00000503827 SPECC1L-ADORA2AF8WAN1 911 aa17.43■□□□□ 0.38
PDLIM7-210ENST00000503827 CCNT1O60563 726 aaKnown RBP17.43■□□□□ 0.38
PDLIM7-210ENST00000503827 MOSPD3O75425 235 aa17.43■□□□□ 0.38
PDLIM7-210ENST00000503827 LYPLA2O95372 231 aa17.43■□□□□ 0.38
PDLIM7-210ENST00000503827 DEXIO95424 95 aa17.43■□□□□ 0.38
PDLIM7-210ENST00000503827 BAG4O95429 457 aaKnown RBP17.43■□□□□ 0.38
PDLIM7-210ENST00000503827 SEC24AO95486 1093 aa17.43■□□□□ 0.38
PDLIM7-210ENST00000503827 GJA1P17302 382 aa17.43■□□□□ 0.38
PDLIM7-210ENST00000503827 IGFBP6P24592 240 aaPredicted RBP17.43■□□□□ 0.38
PDLIM7-210ENST00000503827 MPLP40238 635 aa17.43■□□□□ 0.38
PDLIM7-210ENST00000503827 BRCC3P46736 316 aa17.43■□□□□ 0.38
PDLIM7-210ENST00000503827 PRPF4BQ13523 1007 aaKnown RBP17.43■□□□□ 0.38
PDLIM7-210ENST00000503827 NPY5RQ15761 445 aa17.43■□□□□ 0.38
PDLIM7-210ENST00000503827 UPP1Q16831 310 aa17.43■□□□□ 0.38
PDLIM7-210ENST00000503827 CD300LGQ6UXG3 332 aa17.43■□□□□ 0.38
PDLIM7-210ENST00000503827 KBTBD6Q86V97 674 aa17.43■□□□□ 0.38
PDLIM7-210ENST00000503827 SLFN12Q8IYM2 578 aa17.43■□□□□ 0.38
PDLIM7-210ENST00000503827 FBXL16Q8N461 479 aa17.43■□□□□ 0.38
PDLIM7-210ENST00000503827 SLITRK6Q9H5Y7 841 aa17.43■□□□□ 0.38
PDLIM7-210ENST00000503827 ASAH2Q9NR71 780 aa17.43■□□□□ 0.38
PDLIM7-210ENST00000503827 GDAQ9Y2T3 454 aa17.43■□□□□ 0.38
PDLIM7-210ENST00000503827 NCANO14594 1321 aa17.43■□□□□ 0.38
PDLIM7-210ENST00000503827 CCDC163A0A0D9SF12 145 aa17.42■□□□□ 0.38
PDLIM7-210ENST00000503827 MYBPHLA2RUH7 354 aa17.42■□□□□ 0.38
PDLIM7-210ENST00000503827 SOBPA7XYQ1 873 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms