RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 PYGMP11217 842 aa24.06■■□□□ 1.44
PCDH1-204ENST00000503492 CFAP58Q5T655 872 aa24.06■■□□□ 1.44
PCDH1-204ENST00000503492 ZDHHC14Q8IZN3 488 aa24.06■■□□□ 1.44
PCDH1-204ENST00000503492 CYFIP2Q96F07 1278 aa24.06■■□□□ 1.44
PCDH1-204ENST00000503492 TRIM51Q9BSJ1 452 aa24.06■■□□□ 1.44
PCDH1-204ENST00000503492 OGTO15294 1046 aa24.05■■□□□ 1.44
PCDH1-204ENST00000503492 CST3P01034 146 aaPredicted RBP24.05■■□□□ 1.44
PCDH1-204ENST00000503492 MCL1Q07820 350 aa24.05■■□□□ 1.44
PCDH1-204ENST00000503492 TTLL4Q14679 1199 aa24.05■■□□□ 1.44
PCDH1-204ENST00000503492 PPP2R5EQ16537 467 aa24.05■■□□□ 1.44
PCDH1-204ENST00000503492 WDR49Q8IV35 697 aa24.05■■□□□ 1.44
PCDH1-204ENST00000503492 RUFY1Q96T51 708 aa24.05■■□□□ 1.44
PCDH1-204ENST00000503492 CNTN6Q9UQ52 1028 aa24.05■■□□□ 1.44
PCDH1-204ENST00000503492 CCDC66A2RUB6 948 aa24.05■■□□□ 1.44
PCDH1-204ENST00000503492 RRM1P23921 792 aa24.05■■□□□ 1.44
PCDH1-204ENST00000503492 TBXAS1P24557 533 aaPredicted RBP24.05■■□□□ 1.44
PCDH1-204ENST00000503492 SLC26A2P50443 739 aa24.05■■□□□ 1.44
PCDH1-204ENST00000503492 CENPCQ03188 943 aa24.05■■□□□ 1.44
PCDH1-204ENST00000503492 SLC10A4Q96EP9 437 aa24.05■■□□□ 1.44
PCDH1-204ENST00000503492 AVENQ9NQS1 362 aaPredicted RBP24.05■■□□□ 1.44
PCDH1-204ENST00000503492 UTP11Q9Y3A2 253 aaKnown RBP24.05■■□□□ 1.44
PCDH1-204ENST00000503492 MROH7Q68CQ1 1323 aa24.04■■□□□ 1.44
PCDH1-204ENST00000503492 ASB14A6NK59 587 aa24.04■■□□□ 1.44
PCDH1-204ENST00000503492 GRM1Q13255 1194 aa24.04■■□□□ 1.44
PCDH1-204ENST00000503492 C2CD6Q53TS8 623 aa24.04■■□□□ 1.44
PCDH1-204ENST00000503492 SEL1L2Q5TEA6 688 aa24.04■■□□□ 1.44
PCDH1-204ENST00000503492 ARMCX2Q7L311 632 aa24.04■■□□□ 1.44
PCDH1-204ENST00000503492 PHLDB2Q86SQ0 1253 aa24.04■■□□□ 1.44
PCDH1-204ENST00000503492 GOLGA6L1Q8N7Z2 621 aa24.04■■□□□ 1.44
PCDH1-204ENST00000503492 PRELID2Q8N945 189 aa24.04■■□□□ 1.44
PCDH1-204ENST00000503492 RBBP8NLQ8NC74 664 aaPredicted RBP24.04■■□□□ 1.44
PCDH1-204ENST00000503492 ARL8AQ96BM9 186 aa24.04■■□□□ 1.44
PCDH1-204ENST00000503492 TRIM7Q9C029 511 aa24.04■■□□□ 1.44
PCDH1-204ENST00000503492 C2orf40Q9H1Z8 148 aa24.04■■□□□ 1.44
PCDH1-204ENST00000503492 DPH5Q9H2P9 285 aa24.04■■□□□ 1.44
PCDH1-204ENST00000503492 ANAPC7Q9UJX3 599 aa24.04■■□□□ 1.44
PCDH1-204ENST00000503492 CPSF3Q9UKF6 684 aaKnown RBP24.04■■□□□ 1.44
PCDH1-204ENST00000503492 LOC102724159A0A0B4J2E5 919 aa24.03■■□□□ 1.44
PCDH1-204ENST00000503492 GOLGA6CA6NDK9 693 aa24.03■■□□□ 1.44
PCDH1-204ENST00000503492 GOLGA8KD6RF30 607 aa24.03■■□□□ 1.44
PCDH1-204ENST00000503492 HBP1O60381 514 aa24.03■■□□□ 1.44
PCDH1-204ENST00000503492 GOLGA6DP0CG33 693 aa24.03■■□□□ 1.44
PCDH1-204ENST00000503492 GNA15P30679 374 aa24.03■■□□□ 1.44
PCDH1-204ENST00000503492 DR1Q01658 176 aa24.03■■□□□ 1.44
PCDH1-204ENST00000503492 PWP2Q15269 919 aaKnown RBP24.03■■□□□ 1.44
PCDH1-204ENST00000503492 LLGL2Q6P1M3 1020 aa24.03■■□□□ 1.44
PCDH1-204ENST00000503492 FAM212AQ96EL1 285 aa24.03■■□□□ 1.44
PCDH1-204ENST00000503492 NLRP4Q96MN2 994 aa24.03■■□□□ 1.44
PCDH1-204ENST00000503492 MTMR12Q9C0I1 747 aa24.03■■□□□ 1.44
PCDH1-204ENST00000503492 GOLGA6AQ9NYA3 693 aa24.03■■□□□ 1.44
PCDH1-204ENST00000503492 MAPK4P31152 587 aa24.03■■□□□ 1.44
PCDH1-204ENST00000503492 SSTR3P32745 418 aaPredicted RBP24.03■■□□□ 1.44
PCDH1-204ENST00000503492 CLCN3P51790 818 aa24.03■■□□□ 1.44
PCDH1-204ENST00000503492 AP3M2P53677 418 aa24.03■■□□□ 1.44
PCDH1-204ENST00000503492 TTMPQ5BVD1 217 aa24.03■■□□□ 1.44
PCDH1-204ENST00000503492 GJC2Q5T442 439 aaPredicted RBP24.03■■□□□ 1.44
PCDH1-204ENST00000503492 EFCAB12Q6NXP0 572 aa24.03■■□□□ 1.44
PCDH1-204ENST00000503492 MON1BQ7L1V2 547 aa24.03■■□□□ 1.44
PCDH1-204ENST00000503492 ABRAQ8N0Z2 381 aa24.03■■□□□ 1.44
PCDH1-204ENST00000503492 JPH2Q9BR39 696 aaPredicted RBP24.03■■□□□ 1.44
PCDH1-204ENST00000503492 RNPEPQ9H4A4 650 aa24.03■■□□□ 1.44
PCDH1-204ENST00000503492 ASS1P00966 412 aaKnown RBP24.02■■□□□ 1.44
PCDH1-204ENST00000503492 MYBL1P10243 752 aa24.02■■□□□ 1.44
PCDH1-204ENST00000503492 HSPA6P17066 643 aa24.02■■□□□ 1.44
PCDH1-204ENST00000503492 PROZP22891 400 aa24.02■■□□□ 1.44
PCDH1-204ENST00000503492 NSFP46459 744 aaKnown RBP24.02■■□□□ 1.44
PCDH1-204ENST00000503492 PASD1Q8IV76 773 aa24.02■■□□□ 1.44
PCDH1-204ENST00000503492 UBR7Q8N806 425 aa24.02■■□□□ 1.44
PCDH1-204ENST00000503492 FZD8Q9H461 694 aa24.02■■□□□ 1.44
PCDH1-204ENST00000503492 PTPRHQ9HD43 1115 aa24.02■■□□□ 1.44
PCDH1-204ENST00000503492 PNMA3Q9UL41 463 aa24.02■■□□□ 1.44
PCDH1-204ENST00000503492 PHF2O75151 1096 aa24.02■■□□□ 1.44
PCDH1-204ENST00000503492 KRT14P02533 472 aa24.02■■□□□ 1.44
PCDH1-204ENST00000503492 FLT3P36888 993 aa24.02■■□□□ 1.44
PCDH1-204ENST00000503492 ARHGAP1Q07960 439 aa24.02■■□□□ 1.44
PCDH1-204ENST00000503492 PPFIA1Q13136 1202 aa24.02■■□□□ 1.44
PCDH1-204ENST00000503492 TSHZ1Q6ZSZ6 1077 aa24.02■■□□□ 1.44
PCDH1-204ENST00000503492 TRIM11Q96F44 468 aa24.02■■□□□ 1.44
PCDH1-204ENST00000503492 TRIM31Q9BZY9 425 aa24.02■■□□□ 1.44
PCDH1-204ENST00000503492 FAM114A2Q9NRY5 505 aa24.02■■□□□ 1.44
PCDH1-204ENST00000503492 TCRBV7S2A1N4TA0A589 114 aa24.01■■□□□ 1.43
PCDH1-204ENST00000503492 ACKR2O00590 384 aa24.01■■□□□ 1.43
PCDH1-204ENST00000503492 B4GALT5O43286 388 aa24.01■■□□□ 1.43
PCDH1-204ENST00000503492 CAPN2P17655 700 aa24.01■■□□□ 1.43
PCDH1-204ENST00000503492 RWDD2BP57060 319 aa24.01■■□□□ 1.43
PCDH1-204ENST00000503492 NOMO3P69849 1222 aa24.01■■□□□ 1.43
PCDH1-204ENST00000503492 GPRC5AQ8NFJ5 357 aa24.01■■□□□ 1.43
PCDH1-204ENST00000503492 FAM76AQ8TAV0 307 aa24.01■■□□□ 1.43
PCDH1-204ENST00000503492 C18orf8Q96DM3 657 aa24.01■■□□□ 1.43
PCDH1-204ENST00000503492 IMPG2Q9BZV3 1241 aa24.01■■□□□ 1.43
PCDH1-204ENST00000503492 RAB17Q9H0T7 212 aa24.01■■□□□ 1.43
PCDH1-204ENST00000503492 GLTPD2A6NH11 291 aa24.01■■□□□ 1.43
PCDH1-204ENST00000503492 INO80B-WBP1J3KQ70 363 aa24.01■■□□□ 1.43
PCDH1-204ENST00000503492 MYL6P60660 151 aa24.01■■□□□ 1.43
PCDH1-204ENST00000503492 DHX34Q14147 1143 aaKnown RBP24.01■■□□□ 1.43
PCDH1-204ENST00000503492 TFDP1Q14186 410 aa24.01■■□□□ 1.43
PCDH1-204ENST00000503492 ZNF792Q3KQV3 632 aa24.01■■□□□ 1.43
PCDH1-204ENST00000503492 DUPD1Q68J44 220 aa24.01■■□□□ 1.43
PCDH1-204ENST00000503492 TAPT1Q6NXT6 567 aa24.01■■□□□ 1.43
PCDH1-204ENST00000503492 MPZL3Q6UWV2 235 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms