RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 BEST2Q8NFU1 509 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 SLC7A14Q8TBB6 771 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 C8orf76Q96K31 380 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 ZSCAN31Q96LW9 406 aaPredicted RBP6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 ACO2Q99798 780 aaKnown RBP6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 RPP25Q9BUL9 199 aaKnown RBP6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 CCDC94Q9BW85 323 aaPredicted RBP6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 MRPL4Q9BYD3 311 aaKnown RBP6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 EPC1Q9H2F5 836 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 BHMT2Q9H2M3 363 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 PLEKHA5Q9HAU0 1116 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 LTB4R2Q9NPC1 389 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 PRMT8Q9NR22 394 aaPredicted RBP6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 SH2B1Q9NRF2 756 aaPredicted RBP6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 LRWD1Q9UFC0 647 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 NOL7Q9UMY1 257 aaKnown RBP6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 LIMCH1Q9UPQ0 1083 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 DNM3Q9UQ16 869 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 CDY1Q9Y6F8 540 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 DNAH14Q0VDD8 3507 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 KIF26AQ9ULI4 1882 aaPredicted RBP6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 WDR27A2RRH5 827 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 H0YCG3 227 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 M0QZQ0 153 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 STK25O00506 426 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 CCL16O15467 120 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 ADAM12O43184 909 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 LAMTOR5O43504 91 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 JAK2O60674 1132 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 TOM1L1O75674 476 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 OAZ2O95190 189 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 PAPSS2O95340 614 aaPredicted RBP6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 LRG1P02750 347 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 ADRB2P07550 413 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 DCNP07585 359 aaKnown RBP6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 RHOP08100 348 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 WEE1P30291 646 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 CCT6AP40227 531 aaKnown RBP6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 NPTX2P47972 431 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 AARSP49588 968 aaKnown RBP eCLIP6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 POU5F1Q01860 360 aaKnown RBP6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 ADCY1Q08828 1119 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 DMP1Q13316 513 aaPredicted RBP6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 FZD5Q13467 585 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 KYAT1Q16773 422 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 TTC38Q5R3I4 469 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 VARS2Q5ST30 1063 aaKnown RBP6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 MPZL3Q6UWV2 235 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 ZNF852Q6ZMS4 543 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 C1orf186Q6ZWK4 172 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 MAEAQ7L5Y9 396 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 CEP57Q86XR8 500 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 MAP4K3Q8IVH8 894 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 DAW1Q8N136 415 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 APPL2Q8NEU8 664 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 DEPDC1BQ8WUY9 529 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 IRF7Q92985 503 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 SUSD3Q96L08 255 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 ASB16Q96NS5 453 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 ACAP3Q96P50 834 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 CDT1Q9H211 546 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 CXCL16Q9H2A7 254 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 ZSCAN32Q9NX65 697 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 AFF4Q9UHB7 1163 aaKnown RBP6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 ZMYM5Q9UJ78 669 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 MRPS23Q9Y3D9 190 aaKnown RBP6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 DENND4CQ5VZ89 1909 aa6.69□□□□□ -1.34
LSM3P4-201ENST00000502948 TICRRQ7Z2Z1 1910 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 A0A087WWV3 80 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 SHISA7A6NL88 538 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 FAM170BA6NMN3 283 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 SOBPA7XYQ1 873 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 PRR5-ARHGAP8B1AHC4 643 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 PODXLO00592 558 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 FOXD2O60548 495 aaPredicted RBP6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 LRP3O75074 770 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 PSMC3P17980 439 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 FCARP24071 287 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 TKTP29401 623 aaKnown RBP6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 LRPAP1P30533 357 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 ELF1P32519 619 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 CNR2P34972 360 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 TOB1P50616 345 aaPredicted RBP6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 SMTNP53814 917 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 NRLP54845 237 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 PEX3P56589 373 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 ARHGAP8P85298 464 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 SOX4Q06945 474 aaPredicted RBP6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 MCL1Q07820 350 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 MAPK7Q13164 816 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 PLD1Q13393 1074 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 SNW1Q13573 536 aaKnown RBP6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 PPP2R5DQ14738 602 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 ZBTB6Q15916 424 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 ECM1Q16610 540 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 TMEM132AQ24JP5 1023 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 ZNF568Q3ZCX4 644 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 KRT79Q5XKE5 535 aa6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 ARL6IP4Q66PJ3 421 aaKnown RBP6.68□□□□□ -1.34
LSM3P4-201ENST00000502948 ZNF280DQ6N043 979 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms