RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 NOP9Q86U38 636 aaKnown RBP7.87□□□□□ -1.15
CPNE4-202ENST00000502818 SLC30A5Q8TAD4 765 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 CXorf38Q8TB03 319 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 RAET1EQ8TD07 263 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 SH3TC2Q8TF17 1288 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 U2AF1L4Q8WU68 220 aaKnown RBP7.87□□□□□ -1.15
CPNE4-202ENST00000502818 MTG1Q9BT17 334 aaPredicted RBP7.87□□□□□ -1.15
CPNE4-202ENST00000502818 SIX4Q9UIU6 781 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 PTCH2Q9Y6C5 1203 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 PPEF2O14830 753 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 ERLIN2O94905 339 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 INHAP05111 366 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 HSPA6P17066 643 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 ACO1P21399 889 aaKnown RBP7.87□□□□□ -1.15
CPNE4-202ENST00000502818 AKAP5P24588 427 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 IGFBP6P24592 240 aaPredicted RBP7.87□□□□□ -1.15
CPNE4-202ENST00000502818 ABCD1P33897 745 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 BMS1Q14692 1282 aaKnown RBP7.87□□□□□ -1.15
CPNE4-202ENST00000502818 PTPROQ16827 1216 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 UBXN11Q5T124 520 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 CATSPER4Q7RTX7 472 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 ZNF410Q86VK4 478 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 FAM71AQ8IYT1 594 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 SHC3Q92529 594 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 ZMAT2Q96NC0 199 aaKnown RBP7.87□□□□□ -1.15
CPNE4-202ENST00000502818 NT5C1BQ96P26 610 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 APOL6Q9BWW8 343 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 GOLPH3Q9H4A6 298 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 NXF3Q9H4D5 531 aaKnown RBP7.87□□□□□ -1.15
CPNE4-202ENST00000502818 TRMT13Q9NUP7 481 aaKnown RBP7.87□□□□□ -1.15
CPNE4-202ENST00000502818 SNTG2Q9NY99 539 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.87□□□□□ -1.15
CPNE4-202ENST00000502818 GTF2IRD1Q9UHL9 959 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 NAGPAQ9UK23 515 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 NOCTQ9UK39 431 aaKnown RBP7.87□□□□□ -1.15
CPNE4-202ENST00000502818 POLIQ9UNA4 740 aa7.87□□□□□ -1.15
CPNE4-202ENST00000502818 NOC2LQ9Y3T9 749 aaKnown RBP7.87□□□□□ -1.15
CPNE4-202ENST00000502818 V9GYY5 206 aaPredicted RBP7.87□□□□□ -1.15
CPNE4-202ENST00000502818 SCN10AQ9Y5Y9 1956 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 THSD7BQ9C0I4 1608 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 ERICH4A6NGS2 130 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 MEIS3P2A8K0S8 358 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 KIAA0391O15091 583 aaKnown RBP7.86□□□□□ -1.15
CPNE4-202ENST00000502818 CCP110O43303 1012 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 NCK2O43639 380 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 SRGAP2O75044 1071 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 CHRNA1P02708 482 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 HMGCRP04035 888 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 MMEP08473 750 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 MCF2P10911 925 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 RAP1GAPP47736 663 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 NKX3-2P78367 333 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 KRT83P78385 493 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 NCOA4Q13772 614 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 SPA17Q15506 151 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 GLRA4Q5JXX5 417 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 FBXO38Q6PIJ6 1188 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 SCARA5Q6ZMJ2 495 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 SRGAP1Q7Z6B7 1085 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 FAM228AQ86W67 206 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 RPUSD2Q8IZ73 545 aaKnown RBP7.86□□□□□ -1.15
CPNE4-202ENST00000502818 C1orf127Q8N9H9 656 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 ARRDC4Q8NCT1 418 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 GCOM2Q9BZD3 368 aaPredicted RBP7.86□□□□□ -1.15
CPNE4-202ENST00000502818 XYLT2Q9H1B5 865 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 NUCKS1Q9H1E3 243 aaKnown RBP7.86□□□□□ -1.15
CPNE4-202ENST00000502818 RPF1Q9H9Y2 349 aaKnown RBP7.86□□□□□ -1.15
CPNE4-202ENST00000502818 KLK14Q9P0G3 267 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 DDX20Q9UHI6 824 aaKnown RBP7.86□□□□□ -1.15
CPNE4-202ENST00000502818 MYO6Q9UM54 1294 aa7.86□□□□□ -1.15
CPNE4-202ENST00000502818 FKTNO75072 461 aa7.85□□□□□ -1.15
CPNE4-202ENST00000502818 PHACTR2O75167 634 aa7.85□□□□□ -1.15
CPNE4-202ENST00000502818 URI1O94763 535 aaPredicted RBP7.85□□□□□ -1.15
CPNE4-202ENST00000502818 ATP1A1P05023 1023 aaKnown RBP7.85□□□□□ -1.15
CPNE4-202ENST00000502818 FERP16591 822 aa7.85□□□□□ -1.15
CPNE4-202ENST00000502818 SCP2P22307 547 aa7.85□□□□□ -1.15
CPNE4-202ENST00000502818 EIF4BP23588 611 aaKnown RBP7.85□□□□□ -1.15
CPNE4-202ENST00000502818 CASQ1P31415 396 aa7.85□□□□□ -1.15
CPNE4-202ENST00000502818 HNRNPH2P55795 449 aaKnown RBP7.85□□□□□ -1.15
CPNE4-202ENST00000502818 NOP14P78316 857 aaKnown RBP7.85□□□□□ -1.15
CPNE4-202ENST00000502818 FMO1Q01740 532 aa7.85□□□□□ -1.15
CPNE4-202ENST00000502818 CETN1Q12798 172 aa7.85□□□□□ -1.15
CPNE4-202ENST00000502818 ORC1Q13415 861 aa7.85□□□□□ -1.15
CPNE4-202ENST00000502818 ALKBH5Q6P6C2 394 aaKnown RBP7.85□□□□□ -1.15
CPNE4-202ENST00000502818 WDR49Q8IV35 697 aa7.85□□□□□ -1.15
CPNE4-202ENST00000502818 EPS8L1Q8TE68 723 aa7.85□□□□□ -1.15
CPNE4-202ENST00000502818 DDX1Q92499 740 aaKnown RBP7.85□□□□□ -1.15
CPNE4-202ENST00000502818 C18orf25Q96B23 403 aaPredicted RBP7.85□□□□□ -1.15
CPNE4-202ENST00000502818 ARHGEF26Q96DR7 871 aa7.85□□□□□ -1.15
CPNE4-202ENST00000502818 AGPAT1Q99943 283 aa7.85□□□□□ -1.15
CPNE4-202ENST00000502818 KATNAL1Q9BW62 490 aa7.85□□□□□ -1.15
CPNE4-202ENST00000502818 SDCBP2Q9H190 292 aa7.85□□□□□ -1.15
CPNE4-202ENST00000502818 AGO3Q9H9G7 860 aaKnown RBP7.85□□□□□ -1.15
CPNE4-202ENST00000502818 SEPT11Q9NVA2 429 aaKnown RBP7.85□□□□□ -1.15
CPNE4-202ENST00000502818 CACNG4Q9UBN1 327 aa7.85□□□□□ -1.15
CPNE4-202ENST00000502818 FEZ2Q9UHY8 353 aaPredicted RBP7.85□□□□□ -1.15
CPNE4-202ENST00000502818 CDY2AQ9Y6F7 541 aa7.85□□□□□ -1.15
CPNE4-202ENST00000502818 MKI67P46013 3256 aaKnown RBP7.85□□□□□ -1.15
CPNE4-202ENST00000502818 KIF2AO00139 706 aaPredicted RBP7.85□□□□□ -1.15
CPNE4-202ENST00000502818 PJA2O43164 708 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms