RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 TMEM130Q8N3G9 435 aa27.22■■□□□ 1.95
LSM6-202ENST00000502781 MFSD14AQ96MC6 490 aa27.22■■□□□ 1.95
LSM6-202ENST00000502781 TCF25Q9BQ70 676 aa27.22■■□□□ 1.95
LSM6-202ENST00000502781 NSUN3Q9H649 340 aaKnown RBP27.22■■□□□ 1.95
LSM6-202ENST00000502781 NGRNQ9NPE2 291 aaKnown RBP27.22■■□□□ 1.95
LSM6-202ENST00000502781 IRAK3Q9Y616 596 aa27.22■■□□□ 1.95
LSM6-202ENST00000502781 TADA2AO75478 443 aa27.22■■□□□ 1.95
LSM6-202ENST00000502781 MBD3O95983 291 aa27.22■■□□□ 1.95
LSM6-202ENST00000502781 CYP24A1Q07973 514 aa27.22■■□□□ 1.95
LSM6-202ENST00000502781 SURF1Q15526 300 aa27.22■■□□□ 1.95
LSM6-202ENST00000502781 RDH13Q8NBN7 331 aa27.22■■□□□ 1.95
LSM6-202ENST00000502781 BEST2Q8NFU1 509 aa27.22■■□□□ 1.95
LSM6-202ENST00000502781 NOC3LQ8WTT2 800 aaKnown RBP27.22■■□□□ 1.95
LSM6-202ENST00000502781 HERC2P3Q9BVR0 1158 aa27.22■■□□□ 1.95
LSM6-202ENST00000502781 CHST7Q9NS84 486 aa27.22■■□□□ 1.95
LSM6-202ENST00000502781 PCDHGC5Q9Y5F6 944 aa27.22■■□□□ 1.95
LSM6-202ENST00000502781 PPP1R3GB7ZBB8 358 aa27.21■■□□□ 1.95
LSM6-202ENST00000502781 NR2F2P24468 414 aa27.21■■□□□ 1.95
LSM6-202ENST00000502781 GUCY2FP51841 1108 aa27.21■■□□□ 1.95
LSM6-202ENST00000502781 PSMD6Q15008 389 aa27.21■■□□□ 1.95
LSM6-202ENST00000502781 TAS1R1Q7RTX1 841 aa27.21■■□□□ 1.95
LSM6-202ENST00000502781 TMC7Q7Z402 723 aa27.21■■□□□ 1.95
LSM6-202ENST00000502781 MAFAQ8NHW3 353 aaPredicted RBP27.21■■□□□ 1.95
LSM6-202ENST00000502781 DHTKD1Q96HY7 919 aaPredicted RBP27.21■■□□□ 1.95
LSM6-202ENST00000502781 GZF1Q9H116 711 aaPredicted RBP27.21■■□□□ 1.95
LSM6-202ENST00000502781 SF3B1O75533 1304 aaKnown RBP eCLIP27.21■■□□□ 1.958e-6■■■■■ 107
LSM6-202ENST00000502781 ATG2AQ2TAZ0 1938 aa27.2■■□□□ 1.95
LSM6-202ENST00000502781 ANO9A1A5B4 782 aa27.2■■□□□ 1.94
LSM6-202ENST00000502781 CASP4P49662 377 aa27.2■■□□□ 1.94
LSM6-202ENST00000502781 PMS1P54277 932 aaKnown RBP27.2■■□□□ 1.94
LSM6-202ENST00000502781 GPR65Q8IYL9 337 aa27.2■■□□□ 1.94
LSM6-202ENST00000502781 MRPL43Q8N983 215 aaKnown RBP27.2■■□□□ 1.94
LSM6-202ENST00000502781 MICAL1Q8TDZ2 1067 aa27.2■■□□□ 1.94
LSM6-202ENST00000502781 HASPINQ8TF76 798 aa27.2■■□□□ 1.94
LSM6-202ENST00000502781 ENTPD7Q9NQZ7 604 aa27.2■■□□□ 1.94
LSM6-202ENST00000502781 PSMA7O14818 248 aa27.19■■□□□ 1.94
LSM6-202ENST00000502781 MAPK13O15264 365 aa27.19■■□□□ 1.94
LSM6-202ENST00000502781 LILRB3O75022 631 aa27.19■■□□□ 1.94
LSM6-202ENST00000502781 CCNE1P24864 410 aa27.19■■□□□ 1.94
LSM6-202ENST00000502781 RPL13P26373 211 aaKnown RBP27.19■■□□□ 1.94
LSM6-202ENST00000502781 ELAVL2Q12926 359 aaKnown RBP27.19■■□□□ 1.94
LSM6-202ENST00000502781 STIM1Q13586 685 aa27.19■■□□□ 1.94
LSM6-202ENST00000502781 SMC1AQ14683 1233 aaKnown RBP27.19■■□□□ 1.94
LSM6-202ENST00000502781 TCEAL5Q5H9L2 206 aa27.19■■□□□ 1.94
LSM6-202ENST00000502781 FOXR2Q6PJQ5 311 aa27.19■■□□□ 1.94
LSM6-202ENST00000502781 RBM43Q6ZSC3 357 aaKnown RBP27.19■■□□□ 1.94
LSM6-202ENST00000502781 ZC3H3Q8IXZ2 948 aaKnown RBP27.19■■□□□ 1.94
LSM6-202ENST00000502781 INTS13Q9NVM9 706 aa27.19■■□□□ 1.94
LSM6-202ENST00000502781 DPP3Q9NY33 737 aa27.19■■□□□ 1.94
LSM6-202ENST00000502781 PTPRJQ12913 1337 aa27.18■■□□□ 1.94
LSM6-202ENST00000502781 C2orf71A6NGG8 1288 aa27.18■■□□□ 1.94
LSM6-202ENST00000502781 HIDE1A8MVS5 230 aa27.18■■□□□ 1.94
LSM6-202ENST00000502781 PIRO00625 290 aa27.18■■□□□ 1.94
LSM6-202ENST00000502781 CSPG5O95196 566 aa27.18■■□□□ 1.94
LSM6-202ENST00000502781 DSG1Q02413 1049 aa27.18■■□□□ 1.94
LSM6-202ENST00000502781 LRRC63Q05C16 580 aa27.18■■□□□ 1.94
LSM6-202ENST00000502781 COL19A1Q14993 1142 aa27.18■■□□□ 1.94
LSM6-202ENST00000502781 PTPN14Q15678 1187 aa27.18■■□□□ 1.94
LSM6-202ENST00000502781 USP41Q3LFD5 358 aa27.18■■□□□ 1.94
LSM6-202ENST00000502781 KIAA0319Q5VV43 1072 aa27.18■■□□□ 1.94
LSM6-202ENST00000502781 PLPP4Q5VZY2 271 aa27.18■■□□□ 1.94
LSM6-202ENST00000502781 C9orf57Q5W0N0 161 aa27.18■■□□□ 1.94
LSM6-202ENST00000502781 ANKRD40Q6AI12 368 aa27.18■■□□□ 1.94
LSM6-202ENST00000502781 ADGRD2Q7Z7M1 963 aa27.18■■□□□ 1.94
LSM6-202ENST00000502781 WDR49Q8IV35 697 aa27.18■■□□□ 1.94
LSM6-202ENST00000502781 MICALL1Q8N3F8 863 aa27.18■■□□□ 1.94
LSM6-202ENST00000502781 CXorf38Q8TB03 319 aa27.18■■□□□ 1.94
LSM6-202ENST00000502781 PLEKHO2Q8TD55 490 aa27.18■■□□□ 1.94
LSM6-202ENST00000502781 AKAP3O75969 853 aa27.17■■□□□ 1.94
LSM6-202ENST00000502781 AARSP49588 968 aaKnown RBP eCLIP27.17■■□□□ 1.94
LSM6-202ENST00000502781 MCCD1P59942 119 aaPredicted RBP27.17■■□□□ 1.94
LSM6-202ENST00000502781 TFAMQ00059 246 aaKnown RBP27.17■■□□□ 1.94
LSM6-202ENST00000502781 ADAM9Q13443 819 aa27.17■■□□□ 1.94
LSM6-202ENST00000502781 BMS1Q14692 1282 aaKnown RBP27.17■■□□□ 1.94
LSM6-202ENST00000502781 PARD3BQ8TEW8 1205 aa27.17■■□□□ 1.94
LSM6-202ENST00000502781 CACTINQ8WUQ7 758 aaKnown RBP27.17■■□□□ 1.94
LSM6-202ENST00000502781 FRMD4BQ9Y2L6 1034 aa27.17■■□□□ 1.94
LSM6-202ENST00000502781 PPEF2O14830 753 aa27.16■■□□□ 1.94
LSM6-202ENST00000502781 TRAPPC3O43617 180 aa27.16■■□□□ 1.94
LSM6-202ENST00000502781 CXCL14O95715 111 aa27.16■■□□□ 1.94
LSM6-202ENST00000502781 BRCC3P46736 316 aa27.16■■□□□ 1.94
LSM6-202ENST00000502781 GLUD2P49448 558 aa27.16■■□□□ 1.94
LSM6-202ENST00000502781 CLDN10P78369 228 aa27.16■■□□□ 1.94
LSM6-202ENST00000502781 CCDC85BQ15834 202 aaPredicted RBP27.16■■□□□ 1.94
LSM6-202ENST00000502781 FAM171A1Q5VUB5 890 aa27.16■■□□□ 1.94
LSM6-202ENST00000502781 C1orf127Q8N9H9 656 aa27.16■■□□□ 1.94
LSM6-202ENST00000502781 OR5B17Q8NGF7 314 aa27.16■■□□□ 1.94
LSM6-202ENST00000502781 AUTS2Q8WXX7 1259 aa27.16■■□□□ 1.94
LSM6-202ENST00000502781 PPP2R3CQ969Q6 453 aa27.16■■□□□ 1.94
LSM6-202ENST00000502781 FAM84AQ96KN4 292 aa27.16■■□□□ 1.94
LSM6-202ENST00000502781 CGRRF1Q99675 332 aa27.16■■□□□ 1.94
LSM6-202ENST00000502781 TSG101Q99816 390 aa27.16■■□□□ 1.94
LSM6-202ENST00000502781 TRIM49BA6NDI0 452 aa27.15■■□□□ 1.94
LSM6-202ENST00000502781 FGFR3P22607 806 aa27.15■■□□□ 1.94
LSM6-202ENST00000502781 HYAL1Q12794 435 aa27.15■■□□□ 1.94
LSM6-202ENST00000502781 CEP135Q66GS9 1140 aa27.15■■□□□ 1.94
LSM6-202ENST00000502781 LMBRD2Q68DH5 695 aaPredicted RBP27.15■■□□□ 1.94
LSM6-202ENST00000502781 TTI2Q6NXR4 508 aa27.15■■□□□ 1.94
LSM6-202ENST00000502781 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.15■■□□□ 1.94
LSM6-202ENST00000502781 CCDC127Q96BQ5 260 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms