RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 WHRNQ9P202 907 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 STXBP5LQ9Y2K9 1186 aa7.89□□□□□ -1.15
PDGFC-203ENST00000502773 COL1A2P08123 1366 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 GSTTP1A0A1W2PQM5 241 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 CYP26A1O43174 497 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 SASH3O75995 380 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 HLA-DRAP01903 254 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 NR1D1P20393 614 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 DRP2Q13474 957 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 IRF5Q13568 498 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 CUL2Q13617 745 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 KRT71Q3SY84 523 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 PNMA8AQ86V59 439 aaPredicted RBP7.88□□□□□ -1.15
PDGFC-203ENST00000502773 DAW1Q8N136 415 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 HAUS1Q96CS2 278 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 SAAL1Q96ER3 474 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 FGFBP2Q9BYJ0 223 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 DHX33Q9H6R0 707 aaKnown RBP7.88□□□□□ -1.15
PDGFC-203ENST00000502773 ERAP1Q9NZ08 941 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 ZNF214Q9UL59 606 aaPredicted RBP7.88□□□□□ -1.15
PDGFC-203ENST00000502773 SLC45A1Q9Y2W3 748 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 RRN3P2A6NIE6 340 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 SPDYE16A6NNV3 312 aaPredicted RBP7.88□□□□□ -1.15
PDGFC-203ENST00000502773 NDUFAB1O14561 156 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 RGS16O15492 202 aaPredicted RBP7.88□□□□□ -1.15
PDGFC-203ENST00000502773 RAD51CO43502 376 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 ATF2P15336 505 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 GNA15P30679 374 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 SLC8A3P57103 927 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 LACTBP83111 547 aaPredicted RBP7.88□□□□□ -1.15
PDGFC-203ENST00000502773 DHX9Q08211 1270 aaKnown RBP7.88□□□□□ -1.15
PDGFC-203ENST00000502773 ZACNQ401N2 412 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 PHLDB3Q6NSJ2 640 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 BRSK2Q8IWQ3 736 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 RIBC1Q8N443 379 aaPredicted RBP7.88□□□□□ -1.15
PDGFC-203ENST00000502773 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.88□□□□□ -1.15
PDGFC-203ENST00000502773 EPS8L1Q8TE68 723 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 SH3GL2Q99962 352 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 VTA1Q9NP79 307 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 AGTPBP1Q9UPW5 1226 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 A0A087WUV0 522 aaPredicted RBP7.88□□□□□ -1.15
PDGFC-203ENST00000502773 GOLGA8IPA6NC78 632 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 GOLGA8JA6NMD2 632 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 PDE2AO00408 941 aaPredicted RBP7.88□□□□□ -1.15
PDGFC-203ENST00000502773 RNF8O76064 485 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 TOMM70O94826 608 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 PHBP35232 272 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 ARL2P36404 184 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 TMEM132BQ14DG7 1078 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 DNAJC24Q6P3W2 148 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 ANO5Q75V66 913 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 GSTA5Q7RTV2 222 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 FBXO41Q8TF61 875 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 FRMD8Q9BZ67 464 aaPredicted RBP7.88□□□□□ -1.15
PDGFC-203ENST00000502773 NIF3L1Q9GZT8 377 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 EPC1Q9H2F5 836 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 ASIC3Q9UHC3 531 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 ANAPC7Q9UJX3 599 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 NENFQ9UMX5 172 aa7.88□□□□□ -1.15
PDGFC-203ENST00000502773 LRRIQ3A6PVS8 624 aaPredicted RBP7.87□□□□□ -1.15
PDGFC-203ENST00000502773 NFKBIEO00221 500 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 AGTP01019 485 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 GH1P01241 217 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 PRKCBP05771 671 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 GNGT1P63211 74 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 FKBP1BP68106 108 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 SP4Q02446 784 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 PPP3CAQ08209 521 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 MYO1EQ12965 1108 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 ZNF667Q5HYK9 610 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 SLC13A5Q86YT5 568 aaPredicted RBP7.87□□□□□ -1.15
PDGFC-203ENST00000502773 LNX1Q8TBB1 728 aaPredicted RBP7.87□□□□□ -1.15
PDGFC-203ENST00000502773 P2RX7Q99572 595 aaKnown RBP7.87□□□□□ -1.15
PDGFC-203ENST00000502773 THAP2Q9H0W7 228 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 ASB7Q9H672 318 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 COL20A1Q9P218 1284 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 PLAAQ9Y263 795 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 PAEPP09466 180 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 CLTAP09496 248 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 PMS2P54278 862 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 YARSP54577 528 aaKnown RBP7.87□□□□□ -1.15
PDGFC-203ENST00000502773 SLC7A5Q01650 507 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 NCOA4Q13772 614 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 PLA2G4FQ68DD2 849 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 TADA2BQ86TJ2 420 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 SLC51AQ86UW1 340 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 PHF13Q86YI8 300 aaPredicted RBP7.87□□□□□ -1.15
PDGFC-203ENST00000502773 CBWD2Q8IUF1 395 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 ABRAQ8N0Z2 381 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 EXD1Q8NHP7 514 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 SLC10A4Q96EP9 437 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 GLIS2Q9BZE0 524 aaPredicted RBP7.87□□□□□ -1.15
PDGFC-203ENST00000502773 DMGDHQ9UI17 866 aaKnown RBP7.87□□□□□ -1.15
PDGFC-203ENST00000502773 EFR3BQ9Y2G0 817 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 DYTNA2CJ06 578 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 FANCGO15287 622 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 CCNE2O96020 404 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 CETPP11597 493 aa7.87□□□□□ -1.15
PDGFC-203ENST00000502773 EIF4BP23588 611 aaKnown RBP7.87□□□□□ -1.15
PDGFC-203ENST00000502773 GUCY2FP51841 1108 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms