RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 B3GAT3O94766 335 aa16.86■□□□□ 0.29
CPNE1-228ENST00000498814 CD44P16070 742 aaKnown RBP16.86■□□□□ 0.29
CPNE1-228ENST00000498814 CYP24A1Q07973 514 aa16.86■□□□□ 0.29
CPNE1-228ENST00000498814 PSMD6Q15008 389 aa16.86■□□□□ 0.29
CPNE1-228ENST00000498814 TIGD5Q53EQ6 642 aa16.86■□□□□ 0.29
CPNE1-228ENST00000498814 FUT10Q6P4F1 479 aa16.86■□□□□ 0.29
CPNE1-228ENST00000498814 CD300LGQ6UXG3 332 aa16.86■□□□□ 0.29
CPNE1-228ENST00000498814 VPS52Q8N1B4 723 aa16.86■□□□□ 0.29
CPNE1-228ENST00000498814 CACTINQ8WUQ7 758 aaKnown RBP16.86■□□□□ 0.29
CPNE1-228ENST00000498814 TCF25Q9BQ70 676 aa16.86■□□□□ 0.29
CPNE1-228ENST00000498814 ZBP1Q9H171 429 aa16.86■□□□□ 0.29
CPNE1-228ENST00000498814 NGRNQ9NPE2 291 aaKnown RBP16.86■□□□□ 0.29
CPNE1-228ENST00000498814 VWA8A3KMH1 1905 aa16.86■□□□□ 0.29
CPNE1-228ENST00000498814 MAPK13O15264 365 aa16.85■□□□□ 0.29
CPNE1-228ENST00000498814 SOD2P04179 222 aa16.85■□□□□ 0.29
CPNE1-228ENST00000498814 CTSAP10619 480 aa16.85■□□□□ 0.29
CPNE1-228ENST00000498814 NR2F2P24468 414 aa16.85■□□□□ 0.29
CPNE1-228ENST00000498814 CCNE1P24864 410 aa16.85■□□□□ 0.29
CPNE1-228ENST00000498814 IRS1P35568 1242 aa16.85■□□□□ 0.29
CPNE1-228ENST00000498814 CASP4P49662 377 aa16.85■□□□□ 0.29
CPNE1-228ENST00000498814 LRRC63Q05C16 580 aa16.85■□□□□ 0.29
CPNE1-228ENST00000498814 ELAVL2Q12926 359 aaKnown RBP16.85■□□□□ 0.29
CPNE1-228ENST00000498814 ADAM9Q13443 819 aa16.85■□□□□ 0.29
CPNE1-228ENST00000498814 BMS1Q14692 1282 aaKnown RBP16.85■□□□□ 0.29
CPNE1-228ENST00000498814 FOXR2Q6PJQ5 311 aa16.85■□□□□ 0.29
CPNE1-228ENST00000498814 TMC7Q7Z402 723 aa16.85■□□□□ 0.29
CPNE1-228ENST00000498814 C3orf58Q8NDZ4 430 aa16.85■□□□□ 0.29
CPNE1-228ENST00000498814 MICAL1Q8TDZ2 1067 aa16.85■□□□□ 0.29
CPNE1-228ENST00000498814 TSG101Q99816 390 aa16.85■□□□□ 0.29
CPNE1-228ENST00000498814 HERC2P3Q9BVR0 1158 aa16.85■□□□□ 0.29
CPNE1-228ENST00000498814 GPR62Q9BZJ7 368 aa16.85■□□□□ 0.29
CPNE1-228ENST00000498814 NSUN3Q9H649 340 aaKnown RBP16.85■□□□□ 0.29
CPNE1-228ENST00000498814 ENTPD7Q9NQZ7 604 aa16.85■□□□□ 0.29
CPNE1-228ENST00000498814 FRMD4BQ9Y2L6 1034 aa16.85■□□□□ 0.29
CPNE1-228ENST00000498814 IRAK3Q9Y616 596 aa16.85■□□□□ 0.29
CPNE1-228ENST00000498814 SF3B1O75533 1304 aaKnown RBP eCLIP16.85■□□□□ 0.29
CPNE1-228ENST00000498814 SCN1AP35498 2009 aa16.85■□□□□ 0.29
CPNE1-228ENST00000498814 ANO9A1A5B4 782 aa16.84■□□□□ 0.29
CPNE1-228ENST00000498814 PTMSP20962 102 aa16.84■□□□□ 0.29
CPNE1-228ENST00000498814 IGFBP6P24592 240 aaPredicted RBP16.84■□□□□ 0.29
CPNE1-228ENST00000498814 GUCY2FP51841 1108 aa16.84■□□□□ 0.29
CPNE1-228ENST00000498814 PMS1P54277 932 aaKnown RBP16.84■□□□□ 0.29
CPNE1-228ENST00000498814 TFAMQ00059 246 aaKnown RBP16.84■□□□□ 0.29
CPNE1-228ENST00000498814 SMC1AQ14683 1233 aaKnown RBP16.84■□□□□ 0.29
CPNE1-228ENST00000498814 CEP135Q66GS9 1140 aa16.84■□□□□ 0.29
CPNE1-228ENST00000498814 ANKRD40Q6AI12 368 aa16.84■□□□□ 0.29
CPNE1-228ENST00000498814 RBM43Q6ZSC3 357 aaKnown RBP16.84■□□□□ 0.29
CPNE1-228ENST00000498814 WDR49Q8IV35 697 aa16.84■□□□□ 0.29
CPNE1-228ENST00000498814 GPR65Q8IYL9 337 aa16.84■□□□□ 0.29
CPNE1-228ENST00000498814 MRPL43Q8N983 215 aaKnown RBP16.84■□□□□ 0.29
CPNE1-228ENST00000498814 HASPINQ8TF76 798 aa16.84■□□□□ 0.29
CPNE1-228ENST00000498814 CHST7Q9NS84 486 aa16.84■□□□□ 0.29
CPNE1-228ENST00000498814 INTS13Q9NVM9 706 aa16.84■□□□□ 0.29
CPNE1-228ENST00000498814 DPP3Q9NY33 737 aa16.84■□□□□ 0.29
CPNE1-228ENST00000498814 REV3LO60673 3130 aa16.83■□□□□ 0.29
CPNE1-228ENST00000498814 PIRO00625 290 aa16.83■□□□□ 0.28
CPNE1-228ENST00000498814 CETN3O15182 167 aa16.83■□□□□ 0.28
CPNE1-228ENST00000498814 TRAPPC3O43617 180 aa16.83■□□□□ 0.28
CPNE1-228ENST00000498814 AKAP3O75969 853 aa16.83■□□□□ 0.28
CPNE1-228ENST00000498814 CXCL14O95715 111 aa16.83■□□□□ 0.28
CPNE1-228ENST00000498814 PAX3P23760 479 aa16.83■□□□□ 0.28
CPNE1-228ENST00000498814 PSMC2P35998 433 aaKnown RBP16.83■□□□□ 0.28
CPNE1-228ENST00000498814 FKBP3Q00688 224 aaKnown RBP16.83■□□□□ 0.28
CPNE1-228ENST00000498814 DUOXA2Q1HG44 320 aa16.83■□□□□ 0.28
CPNE1-228ENST00000498814 USP41Q3LFD5 358 aa16.83■□□□□ 0.28
CPNE1-228ENST00000498814 C9orf57Q5W0N0 161 aa16.83■□□□□ 0.28
CPNE1-228ENST00000498814 TAS1R1Q7RTX1 841 aa16.83■□□□□ 0.28
CPNE1-228ENST00000498814 ZC3H3Q8IXZ2 948 aaKnown RBP16.83■□□□□ 0.28
CPNE1-228ENST00000498814 TMEM130Q8N3G9 435 aa16.83■□□□□ 0.28
CPNE1-228ENST00000498814 MLKLQ8NB16 471 aa16.83■□□□□ 0.28
CPNE1-228ENST00000498814 NELFBQ8WX92 580 aa16.83■□□□□ 0.28
CPNE1-228ENST00000498814 CCDC127Q96BQ5 260 aa16.83■□□□□ 0.28
CPNE1-228ENST00000498814 FNBP1Q96RU3 617 aa16.83■□□□□ 0.28
CPNE1-228ENST00000498814 MKNK1Q9BUB5 465 aa16.83■□□□□ 0.28
CPNE1-228ENST00000498814 GZF1Q9H116 711 aaPredicted RBP16.83■□□□□ 0.28
CPNE1-228ENST00000498814 SSX2IPQ9Y2D8 614 aa16.83■□□□□ 0.28
CPNE1-228ENST00000498814 NUB1Q9Y5A7 615 aa16.83■□□□□ 0.28
CPNE1-228ENST00000498814 PCDHGC5Q9Y5F6 944 aa16.83■□□□□ 0.28
CPNE1-228ENST00000498814 PTPRJQ12913 1337 aa16.82■□□□□ 0.28
CPNE1-228ENST00000498814 BICDL2A1A5D9 508 aa16.82■□□□□ 0.28
CPNE1-228ENST00000498814 TRIM49BA6NDI0 452 aa16.82■□□□□ 0.28
CPNE1-228ENST00000498814 C2orf71A6NGG8 1288 aa16.82■□□□□ 0.28
CPNE1-228ENST00000498814 TULP1O00294 542 aaPredicted RBP16.82■□□□□ 0.28
CPNE1-228ENST00000498814 LILRB3O75022 631 aa16.82■□□□□ 0.28
CPNE1-228ENST00000498814 CSPG5O95196 566 aa16.82■□□□□ 0.28
CPNE1-228ENST00000498814 URODP06132 367 aa16.82■□□□□ 0.28
CPNE1-228ENST00000498814 TMEM191BP0C7N4 346 aa16.82■□□□□ 0.28
CPNE1-228ENST00000498814 DLATP10515 647 aaKnown RBP16.82■□□□□ 0.28
CPNE1-228ENST00000498814 GLUD2P49448 558 aa16.82■□□□□ 0.28
CPNE1-228ENST00000498814 MCCD1P59942 119 aaPredicted RBP16.82■□□□□ 0.28
CPNE1-228ENST00000498814 CLDN10P78369 228 aa16.82■□□□□ 0.28
CPNE1-228ENST00000498814 DSG1Q02413 1049 aa16.82■□□□□ 0.28
CPNE1-228ENST00000498814 ENPEPQ07075 957 aa16.82■□□□□ 0.28
CPNE1-228ENST00000498814 PTPN14Q15678 1187 aa16.82■□□□□ 0.28
CPNE1-228ENST00000498814 TCEAL5Q5H9L2 206 aa16.82■□□□□ 0.28
CPNE1-228ENST00000498814 CCDC183Q5T5S1 534 aa16.82■□□□□ 0.28
CPNE1-228ENST00000498814 FAM171A1Q5VUB5 890 aa16.82■□□□□ 0.28
CPNE1-228ENST00000498814 KIAA0319Q5VV43 1072 aa16.82■□□□□ 0.28
CPNE1-228ENST00000498814 PLPP4Q5VZY2 271 aa16.82■□□□□ 0.28
CPNE1-228ENST00000498814 KLHL10Q6JEL2 608 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms