RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 HCFC1R1Q9NWW0 138 aa13.19□□□□□ -0.3
CNOT4-211ENST00000498534 GDE1Q9NZC3 331 aa13.19□□□□□ -0.3
CNOT4-211ENST00000498534 DLGAP2Q9P1A6 1054 aa13.19□□□□□ -0.3
CNOT4-211ENST00000498534 DNMT3BQ9UBC3 853 aaKnown RBP13.19□□□□□ -0.3
CNOT4-211ENST00000498534 FAM170BA6NMN3 283 aa13.18□□□□□ -0.3
CNOT4-211ENST00000498534 I3L4J1 428 aa13.18□□□□□ -0.3
CNOT4-211ENST00000498534 LAD1O00515 517 aa13.18□□□□□ -0.3
CNOT4-211ENST00000498534 MCF2P10911 925 aa13.18□□□□□ -0.3
CNOT4-211ENST00000498534 U2AF2P26368 475 aaKnown RBP eCLIP13.18□□□□□ -0.3
CNOT4-211ENST00000498534 BRCC3P46736 316 aa13.18□□□□□ -0.3
CNOT4-211ENST00000498534 ARPP19P56211 112 aa13.18□□□□□ -0.3
CNOT4-211ENST00000498534 UBXN2BQ14CS0 331 aa13.18□□□□□ -0.3
CNOT4-211ENST00000498534 MLF2Q15773 248 aaPredicted RBP13.18□□□□□ -0.3
CNOT4-211ENST00000498534 XKR4Q5GH76 650 aa13.18□□□□□ -0.3
CNOT4-211ENST00000498534 RSPO2Q6UXX9 243 aaPredicted RBP13.18□□□□□ -0.3
CNOT4-211ENST00000498534 DTHD1Q6ZMT9 781 aa13.18□□□□□ -0.3
CNOT4-211ENST00000498534 ERMP1Q7Z2K6 904 aa13.18□□□□□ -0.3
CNOT4-211ENST00000498534 NPAS3Q8IXF0 933 aa13.18□□□□□ -0.3
CNOT4-211ENST00000498534 IGSF22Q8N9C0 903 aa13.18□□□□□ -0.3
CNOT4-211ENST00000498534 ING5Q8WYH8 240 aa13.18□□□□□ -0.3
CNOT4-211ENST00000498534 MCRS1Q96EZ8 462 aa13.18□□□□□ -0.3
CNOT4-211ENST00000498534 BORCS6Q96GS4 357 aa13.18□□□□□ -0.3
CNOT4-211ENST00000498534 HINFPQ9BQA5 517 aa13.18□□□□□ -0.3
CNOT4-211ENST00000498534 KXD1Q9BQD3 176 aa13.18□□□□□ -0.3
CNOT4-211ENST00000498534 TARS2Q9BW92 718 aaKnown RBP13.18□□□□□ -0.3
CNOT4-211ENST00000498534 OSBPL6Q9BZF3 934 aa13.18□□□□□ -0.3
CNOT4-211ENST00000498534 CDT1Q9H211 546 aa13.18□□□□□ -0.3
CNOT4-211ENST00000498534 GOLGA2P5Q9HBQ8 144 aa13.18□□□□□ -0.3
CNOT4-211ENST00000498534 PTPRHQ9HD43 1115 aa13.18□□□□□ -0.3
CNOT4-211ENST00000498534 NUB1Q9Y5A7 615 aa13.18□□□□□ -0.3
CNOT4-211ENST00000498534 E9PMD0 336 aa13.17□□□□□ -0.3
CNOT4-211ENST00000498534 PODXLO00592 558 aa13.17□□□□□ -0.3
CNOT4-211ENST00000498534 ZNF197O14709 1029 aa13.17□□□□□ -0.3
CNOT4-211ENST00000498534 SYN3O14994 580 aa13.17□□□□□ -0.3
CNOT4-211ENST00000498534 NCAM2O15394 837 aa13.17□□□□□ -0.3
CNOT4-211ENST00000498534 LAMTOR5O43504 91 aa13.17□□□□□ -0.3
CNOT4-211ENST00000498534 HIP1RO75146 1068 aa13.17□□□□□ -0.3
CNOT4-211ENST00000498534 ECI2O75521 394 aa13.17□□□□□ -0.3
CNOT4-211ENST00000498534 ABLIM3O94929 683 aa13.17□□□□□ -0.3
CNOT4-211ENST00000498534 RHOP08100 348 aa13.17□□□□□ -0.3
CNOT4-211ENST00000498534 KCNE1P15382 129 aa13.17□□□□□ -0.3
CNOT4-211ENST00000498534 IGFBP6P24592 240 aaPredicted RBP13.17□□□□□ -0.3
CNOT4-211ENST00000498534 SMTNP53814 917 aa13.17□□□□□ -0.3
CNOT4-211ENST00000498534 STRN3Q13033 797 aa13.17□□□□□ -0.3
CNOT4-211ENST00000498534 PDAP1Q13442 181 aaKnown RBP13.17□□□□□ -0.3
CNOT4-211ENST00000498534 NBR1Q14596 966 aa13.17□□□□□ -0.3
CNOT4-211ENST00000498534 VARS2Q5ST30 1063 aaKnown RBP13.17□□□□□ -0.3
CNOT4-211ENST00000498534 ZBTB41Q5SVQ8 909 aa13.17□□□□□ -0.3
CNOT4-211ENST00000498534 SLC8B1Q6J4K2 584 aa13.17□□□□□ -0.3
CNOT4-211ENST00000498534 CD300LGQ6UXG3 332 aa13.17□□□□□ -0.3
CNOT4-211ENST00000498534 CEP120Q8N960 986 aa13.17□□□□□ -0.3
CNOT4-211ENST00000498534 NTPCRQ9BSD7 190 aaKnown RBP13.17□□□□□ -0.3
CNOT4-211ENST00000498534 DDX23Q9BUQ8 820 aaKnown RBP13.17□□□□□ -0.3
CNOT4-211ENST00000498534 TIPINQ9BVW5 301 aa13.17□□□□□ -0.3
CNOT4-211ENST00000498534 CYP4F11Q9HBI6 524 aa13.17□□□□□ -0.3
CNOT4-211ENST00000498534 AVENQ9NQS1 362 aaPredicted RBP13.17□□□□□ -0.3
CNOT4-211ENST00000498534 SPATA6Q9NWH7 488 aaPredicted RBP13.17□□□□□ -0.3
CNOT4-211ENST00000498534 TRIP11Q15643 1979 aa13.17□□□□□ -0.3
CNOT4-211ENST00000498534 CACNA1IQ9P0X4 2223 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 VWA8A3KMH1 1905 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 ARHGEF37A1IGU5 675 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 SFI1A8K8P3 1242 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 GLULP15104 373 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 ATF2P15336 505 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 MARCKSP29966 332 aaPredicted RBP13.16□□□□□ -0.3
CNOT4-211ENST00000498534 PRPHP41219 470 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 MAGEA9P43362 315 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 TOB1P50616 345 aaPredicted RBP13.16□□□□□ -0.3
CNOT4-211ENST00000498534 ROR1Q01973 937 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 SOX4Q06945 474 aaPredicted RBP13.16□□□□□ -0.3
CNOT4-211ENST00000498534 ZRSR1Q15695 479 aaKnown RBP13.16□□□□□ -0.3
CNOT4-211ENST00000498534 ZNF528Q3MIS6 628 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 CYP4A22Q5TCH4 519 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 TPGS2Q68CL5 300 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 IQCEQ6IPM2 695 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 RINT1Q6NUQ1 792 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 MPZL3Q6UWV2 235 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 TCEAL8Q8IYN2 117 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 ELMOD1Q8N336 334 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 KCTD17Q8N5Z5 321 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 C3orf58Q8NDZ4 430 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 APPL2Q8NEU8 664 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 RUBCNQ92622 972 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 ZMAT2Q96NC0 199 aaKnown RBP13.16□□□□□ -0.3
CNOT4-211ENST00000498534 CORO1BQ9BR76 489 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 ARHGAP28Q9P2N2 729 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 FBXO4Q9UKT5 387 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 MRPS17Q9Y2R5 130 aaKnown RBP13.16□□□□□ -0.3
CNOT4-211ENST00000498534 KIF3AQ9Y496 699 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 PCDHB6Q9Y5E3 794 aa13.16□□□□□ -0.3
CNOT4-211ENST00000498534 MYH15Q9Y2K3 1946 aa13.15□□□□□ -0.3
CNOT4-211ENST00000498534 SLC16A4O15374 487 aa13.15□□□□□ -0.3
CNOT4-211ENST00000498534 KINO60870 393 aaKnown RBP13.15□□□□□ -0.3
CNOT4-211ENST00000498534 LRRN2O75325 713 aa13.15□□□□□ -0.3
CNOT4-211ENST00000498534 HARSP12081 509 aaKnown RBP13.15□□□□□ -0.3
CNOT4-211ENST00000498534 CD72P21854 359 aa13.15□□□□□ -0.3
CNOT4-211ENST00000498534 CDC25AP30304 524 aa13.15□□□□□ -0.3
CNOT4-211ENST00000498534 CTXN3Q4LDR2 81 aa13.15□□□□□ -0.3
CNOT4-211ENST00000498534 ZNF852Q6ZMS4 543 aa13.15□□□□□ -0.3
CNOT4-211ENST00000498534 C1orf186Q6ZWK4 172 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms