RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 FAM98AQ8NCA5 519 aaKnown RBP4.29□□□□□ -1.72
PSPC1-205ENST00000497722 FBXO18Q8NFZ0 1043 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 OR2I1PQ8NGU4 316 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 CASKIN2Q8WXE0 1202 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 JDP2Q8WYK2 163 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 CHMP4CQ96CF2 233 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 MRI1Q9BV20 369 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 ZNF277Q9NRM2 450 aaPredicted RBP4.29□□□□□ -1.72
PSPC1-205ENST00000497722 TMEM74BQ9NUR3 256 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 PCDHGA2Q9Y5H1 932 aa4.29□□□□□ -1.72
PSPC1-205ENST00000497722 MAST3O60307 1309 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 ZAR1LA6NP61 321 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 PRSS23O95084 383 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 NUDT3O95989 172 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 HLA-DOAP06340 250 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 HKR1P10072 659 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 FPR1P21462 350 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 GCSHP23434 173 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 PCSK1P29120 753 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 RECQLP46063 649 aaPredicted RBP4.28□□□□□ -1.72
PSPC1-205ENST00000497722 ALDH1A3P47895 512 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 USP14P54578 494 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 BLOC1S1P78537 153 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 ATP8B2P98198 1209 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 KIF23Q02241 960 aaPredicted RBP4.28□□□□□ -1.72
PSPC1-205ENST00000497722 OCA2Q04671 838 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 TTF1Q15361 905 aaPredicted RBP4.28□□□□□ -1.72
PSPC1-205ENST00000497722 PCBP2Q15366 365 aaKnown RBP eCLIP4.28□□□□□ -1.72
PSPC1-205ENST00000497722 UAP1L1Q3KQV9 507 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 PLEKHG6Q3KR16 790 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 PRR16Q569H4 304 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 RRP12Q5JTH9 1297 aaKnown RBP4.28□□□□□ -1.72
PSPC1-205ENST00000497722 SEM1Q6ZVN7 128 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 MED25Q71SY5 747 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 MAPKAPK5Q8IW41 473 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 DRC7Q8IY82 874 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 PQLC1Q8N2U9 271 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.28□□□□□ -1.72
PSPC1-205ENST00000497722 SSH1Q8WYL5 1049 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 ZNF764Q96H86 408 aaPredicted RBP4.28□□□□□ -1.72
PSPC1-205ENST00000497722 IP6K2Q9UHH9 426 aa4.28□□□□□ -1.72
PSPC1-205ENST00000497722 TNKSO95271 1327 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 SALL3Q9BXA9 1300 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 KIAA0355O15063 1070 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 ESRRBO95718 433 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 AMY1AP04745 511 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 IL2RBP14784 551 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 GSPT1P15170 499 aaKnown RBP4.27□□□□□ -1.73
PSPC1-205ENST00000497722 AGXTP21549 392 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 AVPR1BP47901 424 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 UBXN2BQ14CS0 331 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 TSHZ3Q63HK5 1081 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 MIGA2Q7L4E1 593 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 GPR149Q86SP6 731 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 GLCCI1Q86VQ1 547 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 CMTR2Q8IYT2 770 aaKnown RBP4.27□□□□□ -1.73
PSPC1-205ENST00000497722 LCORLQ8N3X6 602 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 STON2Q8WXE9 905 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 NACC2Q96BF6 587 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 HOOK2Q96ED9 719 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 BOD1Q96IK1 185 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 RIOX1Q9H6W3 641 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 METTL14Q9HCE5 456 aaKnown RBP4.27□□□□□ -1.73
PSPC1-205ENST00000497722 LANCL2Q9NS86 450 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 FBXO34Q9NWN3 711 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 MOCS1Q9NZB8 636 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 ZNHIT2Q9UHR6 403 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 ATP11BQ9Y2G3 1177 aa4.27□□□□□ -1.73
PSPC1-205ENST00000497722 COL11A2P13942 1736 aaPredicted RBP4.26□□□□□ -1.73
PSPC1-205ENST00000497722 A0A1B0GTW7 788 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 E2F8A0AVK6 867 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 TRIM75PA6NK02 468 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 DTNBO60941 627 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 NDUFS2O75306 463 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 CDKL5O76039 1030 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 VCAM1P19320 739 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 SLC6A2P23975 617 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 WASP42768 502 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 EPHB1P54762 984 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 MTM1Q13496 603 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 INAVAQ3KP66 663 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 COLEC12Q5KU26 742 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 ADGRG3Q86Y34 549 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 CBARPQ8N350 705 aaPredicted RBP4.26□□□□□ -1.73
PSPC1-205ENST00000497722 ZGPATQ8N5A5 531 aaKnown RBP4.26□□□□□ -1.73
PSPC1-205ENST00000497722 SUPT20HQ8NEM7 779 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 STAG1Q8WVM7 1258 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 TEKT5Q96M29 485 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 MYOCQ99972 504 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 C7orf25Q9BPX7 421 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 ZSWIM1Q9BR11 485 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 SENP6Q9GZR1 1112 aaPredicted RBP4.26□□□□□ -1.73
PSPC1-205ENST00000497722 R3HDMLQ9H3Y0 253 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 LDAHQ9H6V9 325 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 ZNF180Q9UJW8 692 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 AJAP1Q9UKB5 411 aaPredicted RBP4.26□□□□□ -1.73
PSPC1-205ENST00000497722 INTUQ9ULD6 942 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 ACTL7AQ9Y615 435 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 COX11Q9Y6N1 276 aa4.26□□□□□ -1.73
PSPC1-205ENST00000497722 FAM171A2A8MVW0 826 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms