RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 DEPTORQ8TB45 409 aa21.41■■□□□ 1.02
ACTN4-208ENST00000497637 TCP11Q8WWU5 503 aa21.41■■□□□ 1.02
ACTN4-208ENST00000497637 PRIMPOLQ96LW4 560 aa21.41■■□□□ 1.02
ACTN4-208ENST00000497637 DESI2Q9BSY9 194 aa21.41■■□□□ 1.02
ACTN4-208ENST00000497637 PCIF1Q9H4Z3 704 aa21.41■■□□□ 1.02
ACTN4-208ENST00000497637 TMEM134Q9H6X4 195 aa21.41■■□□□ 1.02
ACTN4-208ENST00000497637 PAXBP1Q9Y5B6 917 aa21.41■■□□□ 1.02
ACTN4-208ENST00000497637 ZBTB42B2RXF5 422 aa21.4■■□□□ 1.02
ACTN4-208ENST00000497637 PIGRP01833 764 aa21.4■■□□□ 1.02
ACTN4-208ENST00000497637 GARTP22102 1010 aa21.4■■□□□ 1.02
ACTN4-208ENST00000497637 ADSSP30520 456 aa21.4■■□□□ 1.02
ACTN4-208ENST00000497637 FMO5P49326 533 aa21.4■■□□□ 1.02
ACTN4-208ENST00000497637 ENPEPQ07075 957 aa21.4■■□□□ 1.02
ACTN4-208ENST00000497637 BFSP1Q12934 665 aa21.4■■□□□ 1.02
ACTN4-208ENST00000497637 KLHDC7AQ5VTJ3 777 aa21.4■■□□□ 1.02
ACTN4-208ENST00000497637 TRIM50Q86XT4 487 aa21.4■■□□□ 1.02
ACTN4-208ENST00000497637 EFHBQ8N7U6 833 aa21.4■■□□□ 1.02
ACTN4-208ENST00000497637 CLP1Q92989 425 aaKnown RBP21.4■■□□□ 1.02
ACTN4-208ENST00000497637 NKD2Q969F2 451 aaPredicted RBP21.4■■□□□ 1.02
ACTN4-208ENST00000497637 FBXL5Q9UKA1 691 aa21.4■■□□□ 1.02
ACTN4-208ENST00000497637 MYO6Q9UM54 1294 aa21.4■■□□□ 1.02
ACTN4-208ENST00000497637 VPS13AQ96RL7 3174 aa21.39■■□□□ 1.02
ACTN4-208ENST00000497637 LINC01565O15544 149 aa21.39■■□□□ 1.01
ACTN4-208ENST00000497637 N4BP1O75113 896 aaKnown RBP21.39■■□□□ 1.01
ACTN4-208ENST00000497637 NDUFA10O95299 355 aa21.39■■□□□ 1.01
ACTN4-208ENST00000497637 SLC9A1P19634 815 aa21.39■■□□□ 1.01
ACTN4-208ENST00000497637 MARK3P27448 753 aa21.39■■□□□ 1.01
ACTN4-208ENST00000497637 GTF2F1P35269 517 aaKnown RBP eCLIP21.39■■□□□ 1.01
ACTN4-208ENST00000497637 CYLC1P35663 651 aaPredicted RBP21.39■■□□□ 1.01
ACTN4-208ENST00000497637 VAMP7P51809 220 aa21.39■■□□□ 1.01
ACTN4-208ENST00000497637 POLR2FP61218 127 aaKnown RBP21.39■■□□□ 1.01
ACTN4-208ENST00000497637 ETF1P62495 437 aaKnown RBP21.39■■□□□ 1.01
ACTN4-208ENST00000497637 ZNF484Q5JVG2 852 aa21.39■■□□□ 1.01
ACTN4-208ENST00000497637 SLC39A4Q6P5W5 647 aa21.39■■□□□ 1.01
ACTN4-208ENST00000497637 TRIM65Q6PJ69 517 aa21.39■■□□□ 1.01
ACTN4-208ENST00000497637 NHEJ1Q9H9Q4 299 aaPredicted RBP21.39■■□□□ 1.01
ACTN4-208ENST00000497637 ERAP1Q9NZ08 941 aa21.39■■□□□ 1.01
ACTN4-208ENST00000497637 DAAM1Q9Y4D1 1078 aa21.39■■□□□ 1.01
ACTN4-208ENST00000497637 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.38■■□□□ 1.01
ACTN4-208ENST00000497637 LRRC53A6NM62 1247 aa21.38■■□□□ 1.01
ACTN4-208ENST00000497637 EIF3CLB5ME19 914 aaKnown RBP21.38■■□□□ 1.01
ACTN4-208ENST00000497637 KIAA0391O15091 583 aaKnown RBP21.38■■□□□ 1.01
ACTN4-208ENST00000497637 PMM2O15305 246 aa21.38■■□□□ 1.01
ACTN4-208ENST00000497637 P4HA2O15460 535 aa21.38■■□□□ 1.01
ACTN4-208ENST00000497637 PPFIA4O75335 1185 aa21.38■■□□□ 1.01
ACTN4-208ENST00000497637 LGALS2P05162 132 aa21.38■■□□□ 1.01
ACTN4-208ENST00000497637 HOXD8P13378 290 aaPredicted RBP21.38■■□□□ 1.01
ACTN4-208ENST00000497637 ATF7P17544 494 aaPredicted RBP21.38■■□□□ 1.01
ACTN4-208ENST00000497637 ZNF200P98182 395 aaPredicted RBP21.38■■□□□ 1.01
ACTN4-208ENST00000497637 STRN3Q13033 797 aa21.38■■□□□ 1.01
ACTN4-208ENST00000497637 SFMBT2Q5VUG0 894 aa21.38■■□□□ 1.01
ACTN4-208ENST00000497637 RIPOR3Q96MK2 946 aa21.38■■□□□ 1.01
ACTN4-208ENST00000497637 EIF3CQ99613 913 aaKnown RBP21.38■■□□□ 1.01
ACTN4-208ENST00000497637 SIX2Q9NPC8 291 aa21.38■■□□□ 1.01
ACTN4-208ENST00000497637 CLEC1BQ9P126 229 aa21.38■■□□□ 1.01
ACTN4-208ENST00000497637 USP15Q9Y4E8 981 aaPredicted RBP21.38■■□□□ 1.01
ACTN4-208ENST00000497637 STYXL1Q9Y6J8 313 aa21.38■■□□□ 1.01
ACTN4-208ENST00000497637 WDR87Q6ZQQ6 2873 aa21.37■■□□□ 1.01
ACTN4-208ENST00000497637 KRT83P78385 493 aa21.37■■□□□ 1.01
ACTN4-208ENST00000497637 MAPK8IP2Q13387 824 aaPredicted RBP21.37■■□□□ 1.01
ACTN4-208ENST00000497637 HSP90AA2PQ14568 343 aaPredicted RBP21.37■■□□□ 1.01
ACTN4-208ENST00000497637 ZNF662Q6ZS27 426 aa21.37■■□□□ 1.01
ACTN4-208ENST00000497637 RDH13Q8NBN7 331 aa21.37■■□□□ 1.01
ACTN4-208ENST00000497637 ACRBPQ8NEB7 543 aa21.37■■□□□ 1.01
ACTN4-208ENST00000497637 KIF18AQ8NI77 898 aa21.37■■□□□ 1.01
ACTN4-208ENST00000497637 TMC2Q8TDI7 906 aa21.37■■□□□ 1.01
ACTN4-208ENST00000497637 RPGRIP1Q96KN7 1286 aa21.37■■□□□ 1.01
ACTN4-208ENST00000497637 NLRC4Q9NPP4 1024 aa21.37■■□□□ 1.01
ACTN4-208ENST00000497637 AIPL1Q9NZN9 384 aa21.37■■□□□ 1.01
ACTN4-208ENST00000497637 REXO2Q9Y3B8 237 aaKnown RBP21.37■■□□□ 1.01
ACTN4-208ENST00000497637 SSU72P8A0A1W2PR75 194 aa21.36■■□□□ 1.01
ACTN4-208ENST00000497637 LRRIQ4A6NIV6 560 aa21.36■■□□□ 1.01
ACTN4-208ENST00000497637 K7ERI5 159 aa21.36■■□□□ 1.01
ACTN4-208ENST00000497637 LINC00271P0C7V0 271 aa21.36■■□□□ 1.01
ACTN4-208ENST00000497637 ZNF286BP0CG31 522 aa21.36■■□□□ 1.01
ACTN4-208ENST00000497637 TRIM49P0CI25 452 aa21.36■■□□□ 1.01
ACTN4-208ENST00000497637 TRIM49CP0CI26 452 aa21.36■■□□□ 1.01
ACTN4-208ENST00000497637 UCHL3P15374 230 aa21.36■■□□□ 1.01
ACTN4-208ENST00000497637 CAPSQ13938 189 aa21.36■■□□□ 1.01
ACTN4-208ENST00000497637 MXD4Q14582 209 aaPredicted RBP21.36■■□□□ 1.01
ACTN4-208ENST00000497637 C1orf220Q5T0J3 134 aa21.36■■□□□ 1.01
ACTN4-208ENST00000497637 SLFN12LQ6IEE8 588 aa21.36■■□□□ 1.01
ACTN4-208ENST00000497637 PRPF31Q8WWY3 499 aaKnown RBP21.36■■□□□ 1.01
ACTN4-208ENST00000497637 PSPC1Q8WXF1 523 aaKnown RBP21.36■■□□□ 1.01
ACTN4-208ENST00000497637 BICD1Q96G01 975 aa21.36■■□□□ 1.01
ACTN4-208ENST00000497637 KIAA1586Q9HCI6 787 aa21.36■■□□□ 1.01
ACTN4-208ENST00000497637 ARHGAP20Q9P2F6 1191 aa21.36■■□□□ 1.01
ACTN4-208ENST00000497637 PLXNA3P51805 1871 aa21.36■■□□□ 1.01
ACTN4-208ENST00000497637 RALGAPA2Q2PPJ7 1873 aa21.36■■□□□ 1.01
ACTN4-208ENST00000497637 PHLPP2Q6ZVD8 1323 aa21.35■■□□□ 1.01
ACTN4-208ENST00000497637 GOLGA8IPA6NC78 632 aa21.35■■□□□ 1.01
ACTN4-208ENST00000497637 GOLGA8JA6NMD2 632 aa21.35■■□□□ 1.01
ACTN4-208ENST00000497637 SERPING1P05155 500 aa21.35■■□□□ 1.01
ACTN4-208ENST00000497637 ADRB2P07550 413 aa21.35■■□□□ 1.01
ACTN4-208ENST00000497637 LIG4P49917 911 aa21.35■■□□□ 1.01
ACTN4-208ENST00000497637 EFNA5P52803 228 aa21.35■■□□□ 1.01
ACTN4-208ENST00000497637 MYL7Q01449 175 aa21.35■■□□□ 1.01
ACTN4-208ENST00000497637 APBA1Q02410 837 aa21.35■■□□□ 1.01
ACTN4-208ENST00000497637 EHBP1Q8NDI1 1231 aa21.35■■□□□ 1.01
ACTN4-208ENST00000497637 ZSWIM2Q8NEG5 633 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms