RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 ZGPATQ8N5A5 531 aaKnown RBP4.47□□□□□ -1.69
VPS26A-208ENST00000497022 PPM1NQ8N819 430 aa4.47□□□□□ -1.69
VPS26A-208ENST00000497022 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.47□□□□□ -1.69
VPS26A-208ENST00000497022 SSH1Q8WYL5 1049 aa4.47□□□□□ -1.69
VPS26A-208ENST00000497022 DPF2Q92785 391 aa4.47□□□□□ -1.69
VPS26A-208ENST00000497022 FUBP3Q96I24 572 aaKnown RBP eCLIP4.47□□□□□ -1.69
VPS26A-208ENST00000497022 C7orf25Q9BPX7 421 aa4.47□□□□□ -1.69
VPS26A-208ENST00000497022 REXO4Q9GZR2 422 aaKnown RBP4.47□□□□□ -1.69
VPS26A-208ENST00000497022 MANSC1Q9H8J5 431 aa4.47□□□□□ -1.69
VPS26A-208ENST00000497022 CADPSQ9ULU8 1353 aa4.47□□□□□ -1.69
VPS26A-208ENST00000497022 A0A1B0GTW7 788 aa4.46□□□□□ -1.7
VPS26A-208ENST00000497022 CDKL5O76039 1030 aa4.46□□□□□ -1.7
VPS26A-208ENST00000497022 PRSS23O95084 383 aa4.46□□□□□ -1.7
VPS26A-208ENST00000497022 EGR2P11161 476 aaPredicted RBP4.46□□□□□ -1.7
VPS26A-208ENST00000497022 DDCP20711 480 aa4.46□□□□□ -1.7
VPS26A-208ENST00000497022 GCSHP23434 173 aa4.46□□□□□ -1.7
VPS26A-208ENST00000497022 SLC6A2P23975 617 aa4.46□□□□□ -1.7
VPS26A-208ENST00000497022 IARSP41252 1262 aaKnown RBP4.46□□□□□ -1.7
VPS26A-208ENST00000497022 WASP42768 502 aa4.46□□□□□ -1.7
VPS26A-208ENST00000497022 MXRA7P84157 204 aa4.46□□□□□ -1.7
VPS26A-208ENST00000497022 ATP8B2P98198 1209 aa4.46□□□□□ -1.7
VPS26A-208ENST00000497022 MTM1Q13496 603 aa4.46□□□□□ -1.7
VPS26A-208ENST00000497022 CLUL1Q15846 466 aa4.46□□□□□ -1.7
VPS26A-208ENST00000497022 ABHD17BQ5VST6 288 aa4.46□□□□□ -1.7
VPS26A-208ENST00000497022 B3GNTL1Q67FW5 361 aaPredicted RBP4.46□□□□□ -1.7
VPS26A-208ENST00000497022 UBE3BQ7Z3V4 1068 aa4.46□□□□□ -1.7
VPS26A-208ENST00000497022 C1orf162Q8NEQ5 155 aaPredicted RBP4.46□□□□□ -1.7
VPS26A-208ENST00000497022 NRG4Q8WWG1 115 aa4.46□□□□□ -1.7
VPS26A-208ENST00000497022 ASB10Q8WXI3 467 aa4.46□□□□□ -1.7
VPS26A-208ENST00000497022 LINC00476Q8WZB0 136 aa4.46□□□□□ -1.7
VPS26A-208ENST00000497022 ZSWIM1Q9BR11 485 aa4.46□□□□□ -1.7
VPS26A-208ENST00000497022 FBXO34Q9NWN3 711 aa4.46□□□□□ -1.7
VPS26A-208ENST00000497022 MKS1Q9NXB0 559 aa4.46□□□□□ -1.7
VPS26A-208ENST00000497022 RNF181Q9P0P0 153 aa4.46□□□□□ -1.7
VPS26A-208ENST00000497022 INTUQ9ULD6 942 aa4.46□□□□□ -1.7
VPS26A-208ENST00000497022 RUVBL1Q9Y265 456 aaKnown RBP4.46□□□□□ -1.7
VPS26A-208ENST00000497022 EPN1Q9Y6I3 576 aaPredicted RBP4.46□□□□□ -1.7
VPS26A-208ENST00000497022 COL11A2P13942 1736 aaPredicted RBP4.46□□□□□ -1.7
VPS26A-208ENST00000497022 MYBBP1AQ9BQG0 1328 aaKnown RBP4.46□□□□□ -1.7
VPS26A-208ENST00000497022 CCDC78A2IDD5 438 aa4.45□□□□□ -1.7
VPS26A-208ENST00000497022 FOSP01100 380 aaPredicted RBP4.45□□□□□ -1.7
VPS26A-208ENST00000497022 OCA2Q04671 838 aa4.45□□□□□ -1.7
VPS26A-208ENST00000497022 SPDYE7PQ495Y7 208 aa4.45□□□□□ -1.7
VPS26A-208ENST00000497022 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
VPS26A-208ENST00000497022 RNF187Q5TA31 235 aaPredicted RBP4.45□□□□□ -1.7
VPS26A-208ENST00000497022 RHOT1Q8IXI2 618 aa4.45□□□□□ -1.7
VPS26A-208ENST00000497022 JADE3Q92613 823 aa4.45□□□□□ -1.7
VPS26A-208ENST00000497022 BOD1Q96IK1 185 aa4.45□□□□□ -1.7
VPS26A-208ENST00000497022 FAXDC2Q96IV6 333 aa4.45□□□□□ -1.7
VPS26A-208ENST00000497022 ALOXE3Q9BYJ1 711 aa4.45□□□□□ -1.7
VPS26A-208ENST00000497022 RNPEPQ9H4A4 650 aa4.45□□□□□ -1.7
VPS26A-208ENST00000497022 TUBD1Q9UJT1 453 aa4.45□□□□□ -1.7
VPS26A-208ENST00000497022 FRMD4BQ9Y2L6 1034 aa4.45□□□□□ -1.7
VPS26A-208ENST00000497022 NOX1Q9Y5S8 564 aa4.45□□□□□ -1.7
VPS26A-208ENST00000497022 NDUFS2O75306 463 aa4.44□□□□□ -1.7
VPS26A-208ENST00000497022 HKR1P10072 659 aa4.44□□□□□ -1.7
VPS26A-208ENST00000497022 CKBP12277 381 aa4.44□□□□□ -1.7
VPS26A-208ENST00000497022 ALAS1P13196 640 aa4.44□□□□□ -1.7
VPS26A-208ENST00000497022 CDK11BP21127 795 aaKnown RBP4.44□□□□□ -1.7
VPS26A-208ENST00000497022 FGFR4P22455 802 aa4.44□□□□□ -1.7
VPS26A-208ENST00000497022 GUCY2FP51841 1108 aa4.44□□□□□ -1.7
VPS26A-208ENST00000497022 SEC24CP53992 1094 aa4.44□□□□□ -1.7
VPS26A-208ENST00000497022 BLOC1S1P78537 153 aa4.44□□□□□ -1.7
VPS26A-208ENST00000497022 SCAPQ12770 1279 aa4.44□□□□□ -1.7
VPS26A-208ENST00000497022 FOXI1Q12951 378 aa4.44□□□□□ -1.7
VPS26A-208ENST00000497022 DACT2Q5SW24 774 aa4.44□□□□□ -1.7
VPS26A-208ENST00000497022 SYDE2Q5VT97 1194 aa4.44□□□□□ -1.7
VPS26A-208ENST00000497022 FAM43AQ8N2R8 423 aa4.44□□□□□ -1.7
VPS26A-208ENST00000497022 FAM98AQ8NCA5 519 aaKnown RBP4.44□□□□□ -1.7
VPS26A-208ENST00000497022 CAVIN3Q969G5 261 aa4.44□□□□□ -1.7
VPS26A-208ENST00000497022 FUBP1Q96AE4 644 aaKnown RBP4.44□□□□□ -1.7
VPS26A-208ENST00000497022 GSTO2Q9H4Y5 243 aa4.44□□□□□ -1.7
VPS26A-208ENST00000497022 RSAD1Q9HA92 442 aa4.44□□□□□ -1.7
VPS26A-208ENST00000497022 TMEM74BQ9NUR3 256 aa4.44□□□□□ -1.7
VPS26A-208ENST00000497022 TRHDEQ9UKU6 1024 aa4.44□□□□□ -1.7
VPS26A-208ENST00000497022 AATKQ6ZMQ8 1374 aa4.43□□□□□ -1.7
VPS26A-208ENST00000497022 TCRBV7S2A1N4TA0A589 114 aa4.43□□□□□ -1.7
VPS26A-208ENST00000497022 KLHL33A6NCF5 533 aa4.43□□□□□ -1.7
VPS26A-208ENST00000497022 PCDHGA12O60330 932 aa4.43□□□□□ -1.7
VPS26A-208ENST00000497022 GPANK1O95872 356 aa4.43□□□□□ -1.7
VPS26A-208ENST00000497022 MT-CO1P00395 513 aa4.43□□□□□ -1.7
VPS26A-208ENST00000497022 ITGAMP11215 1152 aa4.43□□□□□ -1.7
VPS26A-208ENST00000497022 C5AR1P21730 350 aa4.43□□□□□ -1.7
VPS26A-208ENST00000497022 CDKN1CP49918 316 aaPredicted RBP4.43□□□□□ -1.7
VPS26A-208ENST00000497022 CTXN1P60606 82 aa4.43□□□□□ -1.7
VPS26A-208ENST00000497022 CXADRP78310 365 aa4.43□□□□□ -1.7
VPS26A-208ENST00000497022 HSD11B2P80365 405 aa4.43□□□□□ -1.7
VPS26A-208ENST00000497022 MTMR1Q13613 665 aa4.43□□□□□ -1.7
VPS26A-208ENST00000497022 GPR149Q86SP6 731 aa4.43□□□□□ -1.7
VPS26A-208ENST00000497022 FITM2Q8N6M3 262 aa4.43□□□□□ -1.7
VPS26A-208ENST00000497022 BOLLQ8N9W6 283 aaKnown RBP4.43□□□□□ -1.7
VPS26A-208ENST00000497022 SIMC1Q8NDZ2 872 aa4.43□□□□□ -1.7
VPS26A-208ENST00000497022 SLC9A6Q92581 669 aa4.43□□□□□ -1.7
VPS26A-208ENST00000497022 MARS2Q96GW9 593 aaKnown RBP4.43□□□□□ -1.7
VPS26A-208ENST00000497022 SPATA5L1Q9BVQ7 753 aa4.43□□□□□ -1.7
VPS26A-208ENST00000497022 CCDC8Q9H0W5 538 aaPredicted RBP4.43□□□□□ -1.7
VPS26A-208ENST00000497022 USP25Q9UHP3 1055 aa4.43□□□□□ -1.7
VPS26A-208ENST00000497022 SAP30BPQ9UHR5 308 aaKnown RBP4.43□□□□□ -1.7
VPS26A-208ENST00000497022 PCDHGA9Q9Y5G4 932 aaKnown RBP4.43□□□□□ -1.7
VPS26A-208ENST00000497022 PCDHGA8Q9Y5G5 932 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms