RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 PRELID2Q8N945 189 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 C1orf131Q8NDD1 294 aaKnown RBP13.95□□□□□ -0.18
GARNL3-220ENST00000496711 OR5B17Q8NGF7 314 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 C18orf8Q96DM3 657 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 ERP44Q9BS26 406 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 IMPG2Q9BZV3 1241 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 C2orf40Q9H1Z8 148 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 CWC15Q9P013 229 aaKnown RBP13.95□□□□□ -0.18
GARNL3-220ENST00000496711 MTUS1Q9ULD2 1270 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 PCDHB4Q9Y5E5 795 aa13.95□□□□□ -0.18
GARNL3-220ENST00000496711 MROH7Q68CQ1 1323 aa13.94□□□□□ -0.18
GARNL3-220ENST00000496711 IGKV6-21A0A0C4DH24 114 aa13.94□□□□□ -0.18
GARNL3-220ENST00000496711 TTLL13PA6NNM8 815 aa13.94□□□□□ -0.18
GARNL3-220ENST00000496711 FAM189A1O60320 539 aa13.94□□□□□ -0.18
GARNL3-220ENST00000496711 PRKCBP05771 671 aa13.94□□□□□ -0.18
GARNL3-220ENST00000496711 GNA15P30679 374 aa13.94□□□□□ -0.18
GARNL3-220ENST00000496711 LAMTOR4Q0VGL1 99 aa13.94□□□□□ -0.18
GARNL3-220ENST00000496711 MOGSQ13724 837 aa13.94□□□□□ -0.18
GARNL3-220ENST00000496711 NCOA4Q13772 614 aa13.94□□□□□ -0.18
GARNL3-220ENST00000496711 SEZ6Q53EL9 994 aa13.94□□□□□ -0.18
GARNL3-220ENST00000496711 TMEM270Q6UE05 265 aa13.94□□□□□ -0.18
GARNL3-220ENST00000496711 MON1BQ7L1V2 547 aa13.94□□□□□ -0.18
GARNL3-220ENST00000496711 FASTKD5Q7L8L6 764 aaKnown RBP13.94□□□□□ -0.18
GARNL3-220ENST00000496711 FBXO16Q8IX29 292 aaPredicted RBP13.94□□□□□ -0.18
GARNL3-220ENST00000496711 RBBP8NLQ8NC74 664 aaPredicted RBP13.94□□□□□ -0.18
GARNL3-220ENST00000496711 CPA5Q8WXQ8 436 aa13.94□□□□□ -0.18
GARNL3-220ENST00000496711 OPTNQ96CV9 577 aa13.94□□□□□ -0.18
GARNL3-220ENST00000496711 RUNDC3BQ96NL0 473 aa13.94□□□□□ -0.18
GARNL3-220ENST00000496711 FMO2Q99518 471 aa13.94□□□□□ -0.18
GARNL3-220ENST00000496711 PLVAPQ9BX97 442 aa13.94□□□□□ -0.18
GARNL3-220ENST00000496711 TRIM31Q9BZY9 425 aa13.94□□□□□ -0.18
GARNL3-220ENST00000496711 FHDC1Q9C0D6 1143 aaPredicted RBP13.94□□□□□ -0.18
GARNL3-220ENST00000496711 MROH8Q9H579 483 aa13.94□□□□□ -0.18
GARNL3-220ENST00000496711 PCYOX1Q9UHG3 505 aa13.94□□□□□ -0.18
GARNL3-220ENST00000496711 CNTN6Q9UQ52 1028 aa13.94□□□□□ -0.18
GARNL3-220ENST00000496711 NUB1Q9Y5A7 615 aa13.94□□□□□ -0.18
GARNL3-220ENST00000496711 GOLGA6L10A6NI86 522 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 ZBTB42B2RXF5 422 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 POTEJP0CG39 1038 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 RRM1P23921 792 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 FLT3P36888 993 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 TNFSF9P41273 254 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 PTGIRP43119 386 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 NOMO3P69849 1222 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 SKOR1P84550 965 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 MKRN4PQ13434 485 aaPredicted RBP13.93□□□□□ -0.18
GARNL3-220ENST00000496711 PLCB4Q15147 1175 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 MAPK6Q16659 721 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 CYP1B1Q16678 543 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 Q3C1V9 767 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 CEP85LQ5SZL2 805 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 PPP1R2P3Q6NXS1 205 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 ZBTB33Q86T24 672 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 DHX37Q8IY37 1157 aaKnown RBP13.93□□□□□ -0.18
GARNL3-220ENST00000496711 LRRC71Q8N4P6 559 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 RNF149Q8NC42 400 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 UBLCP1Q8WVY7 318 aaPredicted RBP13.93□□□□□ -0.18
GARNL3-220ENST00000496711 MAGOHBQ96A72 148 aaKnown RBP13.93□□□□□ -0.18
GARNL3-220ENST00000496711 ATP6V1G3Q96LB4 118 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 SPATA33Q96N06 139 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 ACO2Q99798 780 aaKnown RBP13.93□□□□□ -0.18
GARNL3-220ENST00000496711 JPH2Q9BR39 696 aaPredicted RBP13.93□□□□□ -0.18
GARNL3-220ENST00000496711 TCHPQ9BT92 498 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 CAPS2Q9BXY5 557 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 SPON1Q9HCB6 807 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 UMODL1Q5DID0 1318 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 LOC102724159A0A0B4J2E5 919 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 HMGB1P1B2RPK0 211 aaPredicted RBP13.93□□□□□ -0.18
GARNL3-220ENST00000496711 OGTO15294 1046 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 SRGAP2CP0DJJ0 459 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 GBP1P32455 592 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 SLC1A1P43005 524 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 SLC26A2P50443 739 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 DRG2P55039 364 aaKnown RBP13.93□□□□□ -0.18
GARNL3-220ENST00000496711 PWP2Q15269 919 aaKnown RBP13.93□□□□□ -0.18
GARNL3-220ENST00000496711 KCTD19Q17RG1 926 aaPredicted RBP13.93□□□□□ -0.18
GARNL3-220ENST00000496711 LIN9Q5TKA1 542 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 KCTD16Q68DU8 428 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 TTC27Q6P3X3 843 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 CCDC62Q6P9F0 684 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 CCDC137Q6PK04 289 aaKnown RBP13.93□□□□□ -0.18
GARNL3-220ENST00000496711 LRRC31Q6UY01 552 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 USP50Q70EL3 339 aaPredicted RBP13.93□□□□□ -0.18
GARNL3-220ENST00000496711 ZDHHC14Q8IZN3 488 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 ABRAQ8N0Z2 381 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 SH2D3CQ8N5H7 860 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 C12orf50Q8NA57 414 aaPredicted RBP13.93□□□□□ -0.18
GARNL3-220ENST00000496711 CYFIP2Q96F07 1278 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 ZDHHC18Q9NUE0 388 aa13.93□□□□□ -0.18
GARNL3-220ENST00000496711 H0YGN5 161 aa13.92□□□□□ -0.18
GARNL3-220ENST00000496711 PODXLO00592 558 aa13.92□□□□□ -0.18
GARNL3-220ENST00000496711 THAP12O43422 761 aa13.92□□□□□ -0.18
GARNL3-220ENST00000496711 ERLIN2O94905 339 aa13.92□□□□□ -0.18
GARNL3-220ENST00000496711 ASS1P00966 412 aaKnown RBP13.92□□□□□ -0.18
GARNL3-220ENST00000496711 FNTAP49354 379 aa13.92□□□□□ -0.18
GARNL3-220ENST00000496711 MCL1Q07820 350 aa13.92□□□□□ -0.18
GARNL3-220ENST00000496711 DHX9Q08211 1270 aaKnown RBP13.92□□□□□ -0.18
GARNL3-220ENST00000496711 TFDP1Q14186 410 aa13.92□□□□□ -0.18
GARNL3-220ENST00000496711 SIX1Q15475 284 aaPredicted RBP13.92□□□□□ -0.18
GARNL3-220ENST00000496711 SURF1Q15526 300 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms