RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 ATP1A1P05023 1023 aaKnown RBP17.6■□□□□ 0.41
HLA-A-208ENST00000496081 ASGR1P07306 291 aa17.6■□□□□ 0.41
HLA-A-208ENST00000496081 NFICP08651 508 aa17.6■□□□□ 0.41
HLA-A-208ENST00000496081 KRT5P13647 590 aa17.6■□□□□ 0.41
HLA-A-208ENST00000496081 CYP11B1P15538 503 aa17.6■□□□□ 0.41
HLA-A-208ENST00000496081 CHRNB2P17787 502 aa17.6■□□□□ 0.41
HLA-A-208ENST00000496081 ACO1P21399 889 aaKnown RBP17.6■□□□□ 0.41
HLA-A-208ENST00000496081 NCBP1Q09161 790 aaKnown RBP17.6■□□□□ 0.41
HLA-A-208ENST00000496081 KCNA10Q16322 511 aa17.6■□□□□ 0.41
HLA-A-208ENST00000496081 CCSAPQ6IQ19 270 aaPredicted RBP17.6■□□□□ 0.41
HLA-A-208ENST00000496081 TAF2Q6P1X5 1199 aa17.6■□□□□ 0.41
HLA-A-208ENST00000496081 NOX5Q96PH1 765 aa17.6■□□□□ 0.41
HLA-A-208ENST00000496081 IMPG2Q9BZV3 1241 aa17.6■□□□□ 0.41
HLA-A-208ENST00000496081 ASB7Q9H672 318 aa17.6■□□□□ 0.41
HLA-A-208ENST00000496081 SEPT11Q9NVA2 429 aaKnown RBP17.6■□□□□ 0.41
HLA-A-208ENST00000496081 TAS2R14Q9NYV8 317 aa17.6■□□□□ 0.41
HLA-A-208ENST00000496081 TMCO5BA8MYB1 307 aa17.59■□□□□ 0.41
HLA-A-208ENST00000496081 NPTXRO95502 500 aa17.59■□□□□ 0.41
HLA-A-208ENST00000496081 TBXAS1P24557 533 aaPredicted RBP17.59■□□□□ 0.41
HLA-A-208ENST00000496081 GRM5P41594 1212 aa17.59■□□□□ 0.41
HLA-A-208ENST00000496081 CRYBB1P53674 252 aaPredicted RBP17.59■□□□□ 0.41
HLA-A-208ENST00000496081 GALCP54803 685 aa17.59■□□□□ 0.41
HLA-A-208ENST00000496081 AMPD2Q01433 879 aa17.59■□□□□ 0.41
HLA-A-208ENST00000496081 TRPC3Q13507 836 aa17.59■□□□□ 0.41
HLA-A-208ENST00000496081 SGSM1Q2NKQ1 1148 aa17.59■□□□□ 0.41
HLA-A-208ENST00000496081 DCAF4L1Q3SXM0 396 aa17.59■□□□□ 0.41
HLA-A-208ENST00000496081 JADE1Q6IE81 842 aa17.59■□□□□ 0.41
HLA-A-208ENST00000496081 GDF6Q6KF10 455 aaPredicted RBP17.59■□□□□ 0.41
HLA-A-208ENST00000496081 SLC27A1Q6PCB7 646 aa17.59■□□□□ 0.41
HLA-A-208ENST00000496081 ZNF710Q8N1W2 664 aa17.59■□□□□ 0.41
HLA-A-208ENST00000496081 LRRN4CLQ8ND94 238 aa17.59■□□□□ 0.41
HLA-A-208ENST00000496081 TSC1Q92574 1164 aa17.59■□□□□ 0.41
HLA-A-208ENST00000496081 ACAP3Q96P50 834 aa17.59■□□□□ 0.41
HLA-A-208ENST00000496081 CDC23Q9UJX2 597 aa17.59■□□□□ 0.41
HLA-A-208ENST00000496081 MROH7Q68CQ1 1323 aa17.59■□□□□ 0.41
HLA-A-208ENST00000496081 ANO9A1A5B4 782 aa17.58■□□□□ 0.41
HLA-A-208ENST00000496081 GNRH1P01148 92 aa17.58■□□□□ 0.41
HLA-A-208ENST00000496081 MYCNP04198 464 aaPredicted RBP17.58■□□□□ 0.41
HLA-A-208ENST00000496081 CST5P28325 142 aaPredicted RBP17.58■□□□□ 0.41
HLA-A-208ENST00000496081 NAP1L1P55209 391 aaKnown RBP17.58■□□□□ 0.41
HLA-A-208ENST00000496081 TAF3Q5VWG9 929 aa17.58■□□□□ 0.41
HLA-A-208ENST00000496081 PAPD7Q5XG87 772 aaKnown RBP17.58■□□□□ 0.41
HLA-A-208ENST00000496081 NOTUMQ6P988 496 aa17.58■□□□□ 0.41
HLA-A-208ENST00000496081 RAET1EQ8TD07 263 aa17.58■□□□□ 0.41
HLA-A-208ENST00000496081 PXYLP1Q8TE99 480 aa17.58■□□□□ 0.41
HLA-A-208ENST00000496081 DDX1Q92499 740 aaKnown RBP17.58■□□□□ 0.41
HLA-A-208ENST00000496081 ALS2CR12Q96Q35 445 aa17.58■□□□□ 0.41
HLA-A-208ENST00000496081 PCDHB18PQ96TA0 734 aa17.58■□□□□ 0.41
HLA-A-208ENST00000496081 CARD6Q9BX69 1037 aa17.58■□□□□ 0.41
HLA-A-208ENST00000496081 EIF2AQ9BY44 585 aaKnown RBP17.58■□□□□ 0.41
HLA-A-208ENST00000496081 SAGE1Q9NXZ1 904 aa17.58■□□□□ 0.41
HLA-A-208ENST00000496081 CITO14578 2027 aa17.58■□□□□ 0.4
HLA-A-208ENST00000496081 CLSTN1O94985 981 aa17.58■□□□□ 0.4
HLA-A-208ENST00000496081 MMEP08473 750 aa17.58■□□□□ 0.4
HLA-A-208ENST00000496081 AXLP30530 894 aa17.58■□□□□ 0.4
HLA-A-208ENST00000496081 PDE6CP51160 858 aa17.58■□□□□ 0.4
HLA-A-208ENST00000496081 FMO1Q01740 532 aa17.58■□□□□ 0.4
HLA-A-208ENST00000496081 TUBB2AQ13885 445 aa17.58■□□□□ 0.4
HLA-A-208ENST00000496081 C1orf127Q8N9H9 656 aa17.58■□□□□ 0.4
HLA-A-208ENST00000496081 ERO1AQ96HE7 468 aa17.58■□□□□ 0.4
HLA-A-208ENST00000496081 TUBB2BQ9BVA1 445 aa17.58■□□□□ 0.4
HLA-A-208ENST00000496081 CELF4Q9BZC1 486 aaKnown RBP17.58■□□□□ 0.4
HLA-A-208ENST00000496081 XYLT2Q9H1B5 865 aa17.58■□□□□ 0.4
HLA-A-208ENST00000496081 DDX20Q9UHI6 824 aaKnown RBP17.58■□□□□ 0.4
HLA-A-208ENST00000496081 SIX4Q9UIU6 781 aa17.58■□□□□ 0.4
HLA-A-208ENST00000496081 CNTN6Q9UQ52 1028 aa17.58■□□□□ 0.4
HLA-A-208ENST00000496081 JRKLQ9Y4A0 524 aa17.58■□□□□ 0.4
HLA-A-208ENST00000496081 CDR2Q01850 454 aa17.57■□□□□ 0.4
HLA-A-208ENST00000496081 FAM47CQ5HY64 1035 aa17.57■□□□□ 0.4
HLA-A-208ENST00000496081 APBB1IPQ7Z5R6 666 aaPredicted RBP17.57■□□□□ 0.4
HLA-A-208ENST00000496081 UBR7Q8N806 425 aa17.57■□□□□ 0.4
HLA-A-208ENST00000496081 CCDC94Q9BW85 323 aaPredicted RBP17.57■□□□□ 0.4
HLA-A-208ENST00000496081 ISCUQ9H1K1 167 aa17.57■□□□□ 0.4
HLA-A-208ENST00000496081 PCDHB4Q9Y5E5 795 aa17.57■□□□□ 0.4
HLA-A-208ENST00000496081 PCDHGC5Q9Y5F6 944 aa17.57■□□□□ 0.4
HLA-A-208ENST00000496081 HTTP42858 3142 aa17.57■□□□□ 0.4
HLA-A-208ENST00000496081 GRIN2DO15399 1336 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 DYNC1I1O14576 645 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 CALCAP01258 141 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 TMEM253P0C7T8 217 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 ZNF699Q32M78 642 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 SESTD1Q86VW0 696 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 TMEM130Q8N3G9 435 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 CXorf38Q8TB03 319 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 WNT8BQ93098 351 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 NIF3L1Q9GZT8 377 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 PIN4Q9Y237 131 aaKnown RBP17.56■□□□□ 0.4
HLA-A-208ENST00000496081 PCDHB2Q9Y5E7 798 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 SAR1BQ9Y6B6 198 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 A0A0A6YYK5 440 aaPredicted RBP17.56■□□□□ 0.4
HLA-A-208ENST00000496081 FAM170AA1A519 330 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 ANKRD62A6NC57 917 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 FKTNO75072 461 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 PALMO75781 387 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 KRT19P08727 400 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 GZMAP12544 262 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 ABCB4P21439 1286 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 BPIFB4P59827 614 aa17.56■□□□□ 0.4
HLA-A-208ENST00000496081 MRPS6P82932 125 aaKnown RBP17.56■□□□□ 0.4
HLA-A-208ENST00000496081 TMEM132DQ14C87 1099 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms