RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 C2CD2Q9Y426 696 aa16.92■□□□□ 0.3
PHF1-211ENST00000495509 FHOD1Q9Y613 1164 aa16.92■□□□□ 0.3
PHF1-211ENST00000495509 ARL5CA6NH57 179 aa16.92■□□□□ 0.3
PHF1-211ENST00000495509 AKR1B15C9JRZ8 316 aaPredicted RBP16.92■□□□□ 0.3
PHF1-211ENST00000495509 UCHL3P15374 230 aa16.92■□□□□ 0.3
PHF1-211ENST00000495509 MYL6P60660 151 aa16.92■□□□□ 0.3
PHF1-211ENST00000495509 FIGNQ5HY92 759 aa16.92■□□□□ 0.3
PHF1-211ENST00000495509 IQCEQ6IPM2 695 aa16.92■□□□□ 0.3
PHF1-211ENST00000495509 RRAGAQ7L523 313 aa16.92■□□□□ 0.3
PHF1-211ENST00000495509 GPIHBP1Q8IV16 184 aa16.92■□□□□ 0.3
PHF1-211ENST00000495509 CACTINQ8WUQ7 758 aaKnown RBP16.92■□□□□ 0.3
PHF1-211ENST00000495509 DPP3Q9NY33 737 aa16.92■□□□□ 0.3
PHF1-211ENST00000495509 LUC7L2Q9Y383 392 aaKnown RBP16.92■□□□□ 0.3
PHF1-211ENST00000495509 TTC3P53804 2025 aa16.91■□□□□ 0.3
PHF1-211ENST00000495509 SCN1AP35498 2009 aa16.91■□□□□ 0.3
PHF1-211ENST00000495509 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.91■□□□□ 0.3
PHF1-211ENST00000495509 GOLGA6L6A8MZA4 724 aa16.91■□□□□ 0.3
PHF1-211ENST00000495509 ITGB3P05106 788 aa16.91■□□□□ 0.3
PHF1-211ENST00000495509 KRT19P08727 400 aa16.91■□□□□ 0.3
PHF1-211ENST00000495509 KCNE1P15382 129 aa16.91■□□□□ 0.3
PHF1-211ENST00000495509 KRT9P35527 623 aa16.91■□□□□ 0.3
PHF1-211ENST00000495509 SOX4Q06945 474 aaPredicted RBP16.91■□□□□ 0.3
PHF1-211ENST00000495509 HACE1Q8IYU2 909 aa16.91■□□□□ 0.3
PHF1-211ENST00000495509 BAP1Q92560 729 aa16.91■□□□□ 0.3
PHF1-211ENST00000495509 APBB2Q92870 758 aa16.91■□□□□ 0.3
PHF1-211ENST00000495509 KAT5Q92993 513 aa16.91■□□□□ 0.3
PHF1-211ENST00000495509 NAA15Q9BXJ9 866 aaKnown RBP16.91■□□□□ 0.3
PHF1-211ENST00000495509 RSAD1Q9HA92 442 aa16.91■□□□□ 0.3
PHF1-211ENST00000495509 APOBEC3GQ9HC16 384 aaKnown RBP16.91■□□□□ 0.3
PHF1-211ENST00000495509 APEX2Q9UBZ4 518 aa16.91■□□□□ 0.3
PHF1-211ENST00000495509 GIT1Q9Y2X7 761 aa16.91■□□□□ 0.3
PHF1-211ENST00000495509 DERAQ9Y315 318 aa16.91■□□□□ 0.3
PHF1-211ENST00000495509 MFAP3LO75121 409 aa16.9■□□□□ 0.3
PHF1-211ENST00000495509 SKIP12755 728 aa16.9■□□□□ 0.3
PHF1-211ENST00000495509 TRIM14Q14142 442 aa16.9■□□□□ 0.3
PHF1-211ENST00000495509 MFSD5Q6N075 450 aa16.9■□□□□ 0.3
PHF1-211ENST00000495509 NT5DC4Q86YG4 428 aa16.9■□□□□ 0.3
PHF1-211ENST00000495509 PGBD4Q96DM1 585 aa16.9■□□□□ 0.3
PHF1-211ENST00000495509 PPP1R10Q96QC0 940 aaKnown RBP16.9■□□□□ 0.3
PHF1-211ENST00000495509 GOLGA2P5Q9HBQ8 144 aa16.9■□□□□ 0.3
PHF1-211ENST00000495509 UBE2TQ9NPD8 197 aaPredicted RBP16.9■□□□□ 0.3
PHF1-211ENST00000495509 C1orf112Q9NSG2 853 aa16.9■□□□□ 0.3
PHF1-211ENST00000495509 CEP72Q9P209 647 aa16.9■□□□□ 0.3
PHF1-211ENST00000495509 CACNG4Q9UBN1 327 aa16.9■□□□□ 0.3
PHF1-211ENST00000495509 DNAJC12Q9UKB3 198 aa16.9■□□□□ 0.3
PHF1-211ENST00000495509 MICAL3Q7RTP6 2002 aa16.9■□□□□ 0.3
PHF1-211ENST00000495509 A0A1W2PQJ5 194 aa16.89■□□□□ 0.3
PHF1-211ENST00000495509 PPEF2O14830 753 aa16.89■□□□□ 0.3
PHF1-211ENST00000495509 OFD1O75665 1012 aa16.89■□□□□ 0.3
PHF1-211ENST00000495509 EOMESO95936 686 aa16.89■□□□□ 0.3
PHF1-211ENST00000495509 ACRP10323 421 aa16.89■□□□□ 0.3
PHF1-211ENST00000495509 FGFR1P11362 822 aa16.89■□□□□ 0.3
PHF1-211ENST00000495509 POLR2BP30876 1174 aaKnown RBP16.89■□□□□ 0.3
PHF1-211ENST00000495509 SCNN1GP51170 649 aa16.89■□□□□ 0.3
PHF1-211ENST00000495509 GSDMDP57764 484 aa16.89■□□□□ 0.3
PHF1-211ENST00000495509 TRPC3Q13507 836 aa16.89■□□□□ 0.3
PHF1-211ENST00000495509 CACNA2D4Q7Z3S7 1137 aa16.89■□□□□ 0.3
PHF1-211ENST00000495509 LRRC8AQ8IWT6 810 aa16.89■□□□□ 0.3
PHF1-211ENST00000495509 C7orf61Q8IZ16 206 aa16.89■□□□□ 0.3
PHF1-211ENST00000495509 HELQQ8TDG4 1101 aa16.89■□□□□ 0.3
PHF1-211ENST00000495509 XYLT2Q9H1B5 865 aa16.89■□□□□ 0.3
PHF1-211ENST00000495509 AGAP1Q9UPQ3 857 aa16.89■□□□□ 0.3
PHF1-211ENST00000495509 INPP5FQ9Y2H2 1132 aa16.89■□□□□ 0.3
PHF1-211ENST00000495509 NUB1Q9Y5A7 615 aa16.89■□□□□ 0.3
PHF1-211ENST00000495509 POMCP01189 267 aa16.89■□□□□ 0.29
PHF1-211ENST00000495509 TPM1P09493 284 aa16.89■□□□□ 0.29
PHF1-211ENST00000495509 PNMA6AP0CW24 399 aaPredicted RBP16.89■□□□□ 0.29
PHF1-211ENST00000495509 ZBED6P86452 979 aa16.89■□□□□ 0.29
PHF1-211ENST00000495509 RAPGEF1Q13905 1077 aa16.89■□□□□ 0.29
PHF1-211ENST00000495509 NAB2Q15742 525 aa16.89■□□□□ 0.29
PHF1-211ENST00000495509 ARHGAP44Q17R89 818 aa16.89■□□□□ 0.29
PHF1-211ENST00000495509 WDR44Q5JSH3 913 aa16.89■□□□□ 0.29
PHF1-211ENST00000495509 CLLU1OSQ5K130 101 aa16.89■□□□□ 0.29
PHF1-211ENST00000495509 E4F1Q66K89 784 aaPredicted RBP16.89■□□□□ 0.29
PHF1-211ENST00000495509 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.89■□□□□ 0.29
PHF1-211ENST00000495509 PPM1KQ8N3J5 372 aa16.89■□□□□ 0.29
PHF1-211ENST00000495509 BEST2Q8NFU1 509 aa16.89■□□□□ 0.29
PHF1-211ENST00000495509 KREMEN1Q96MU8 473 aa16.89■□□□□ 0.29
PHF1-211ENST00000495509 NT5C1BQ96P26 610 aa16.89■□□□□ 0.29
PHF1-211ENST00000495509 KCNF1Q9H3M0 494 aa16.89■□□□□ 0.29
PHF1-211ENST00000495509 ABHD10Q9NUJ1 306 aa16.89■□□□□ 0.29
PHF1-211ENST00000495509 CCDC85CA6NKD9 419 aa16.88■□□□□ 0.29
PHF1-211ENST00000495509 LRRC53A6NM62 1247 aa16.88■□□□□ 0.29
PHF1-211ENST00000495509 ASS1P00966 412 aaKnown RBP16.88■□□□□ 0.29
PHF1-211ENST00000495509 IGFBP6P24592 240 aaPredicted RBP16.88■□□□□ 0.29
PHF1-211ENST00000495509 RFC2P35250 354 aa16.88■□□□□ 0.29
PHF1-211ENST00000495509 SGSM1Q2NKQ1 1148 aa16.88■□□□□ 0.29
PHF1-211ENST00000495509 CNKSR3Q6P9H4 555 aa16.88■□□□□ 0.29
PHF1-211ENST00000495509 CNGA4Q8IV77 575 aa16.88■□□□□ 0.29
PHF1-211ENST00000495509 CRIPAKQ8N1N5 446 aa16.88■□□□□ 0.29
PHF1-211ENST00000495509 TMEM199Q8N511 208 aa16.88■□□□□ 0.29
PHF1-211ENST00000495509 OR8K1Q8NGG5 319 aa16.88■□□□□ 0.29
PHF1-211ENST00000495509 RPS6KC1Q96S38 1066 aa16.88■□□□□ 0.29
PHF1-211ENST00000495509 ARID3AQ99856 593 aa16.88■□□□□ 0.29
PHF1-211ENST00000495509 EDEM3Q9BZQ6 932 aa16.88■□□□□ 0.29
PHF1-211ENST00000495509 ITGA11Q9UKX5 1188 aa16.88■□□□□ 0.29
PHF1-211ENST00000495509 UBQLN1Q9UMX0 589 aaKnown RBP16.88■□□□□ 0.29
PHF1-211ENST00000495509 TDRD15B5MCY1 1934 aaKnown RBP16.88■□□□□ 0.29
PHF1-211ENST00000495509 THP07101 528 aa16.87■□□□□ 0.29
PHF1-211ENST00000495509 GATMP50440 423 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms