RNA–Protein interactions for RNA: ENST00000495400.1

PTPN18-216, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-216ENST00000495400 PTPN2P17706 415 aa16.15■□□□□ 0.18
PTPN18-216ENST00000495400 ELF1P32519 619 aa16.15■□□□□ 0.18
PTPN18-216ENST00000495400 RPL9P32969 192 aaKnown RBP16.15■□□□□ 0.18
PTPN18-216ENST00000495400 PFKPQ01813 784 aa16.15■□□□□ 0.18
PTPN18-216ENST00000495400 ROR1Q01973 937 aa16.15■□□□□ 0.18
PTPN18-216ENST00000495400 PRKCQQ04759 706 aa16.15■□□□□ 0.18
PTPN18-216ENST00000495400 SNW1Q13573 536 aaKnown RBP16.15■□□□□ 0.18
PTPN18-216ENST00000495400 MLF2Q15773 248 aaPredicted RBP16.15■□□□□ 0.18
PTPN18-216ENST00000495400 SLC44A4Q53GD3 710 aa16.15■□□□□ 0.18
PTPN18-216ENST00000495400 VARS2Q5ST30 1063 aaKnown RBP16.15■□□□□ 0.18
PTPN18-216ENST00000495400 MPZL3Q6UWV2 235 aa16.15■□□□□ 0.18
PTPN18-216ENST00000495400 KCNK18Q7Z418 384 aa16.15■□□□□ 0.18
PTPN18-216ENST00000495400 KCNG4Q8TDN1 519 aa16.15■□□□□ 0.18
PTPN18-216ENST00000495400 ING5Q8WYH8 240 aa16.15■□□□□ 0.18
PTPN18-216ENST00000495400 KXD1Q9BQD3 176 aa16.15■□□□□ 0.18
PTPN18-216ENST00000495400 NTPCRQ9BSD7 190 aaKnown RBP16.15■□□□□ 0.18
PTPN18-216ENST00000495400 CNTN3Q9P232 1028 aa16.15■□□□□ 0.18
PTPN18-216ENST00000495400 KCNG1Q9UIX4 513 aa16.15■□□□□ 0.18
PTPN18-216ENST00000495400 GVINP1Q7Z2Y8 2422 aa16.14■□□□□ 0.17
PTPN18-216ENST00000495400 WDR27A2RRH5 827 aa16.14■□□□□ 0.17
PTPN18-216ENST00000495400 SFI1A8K8P3 1242 aa16.14■□□□□ 0.17
PTPN18-216ENST00000495400 H7C4K7 107 aa16.14■□□□□ 0.17
PTPN18-216ENST00000495400 SYN3O14994 580 aa16.14■□□□□ 0.17
PTPN18-216ENST00000495400 LRG1P02750 347 aa16.14■□□□□ 0.17
PTPN18-216ENST00000495400 SP9P0CG40 484 aa16.14■□□□□ 0.17
PTPN18-216ENST00000495400 GLULP15104 373 aa16.14■□□□□ 0.17
PTPN18-216ENST00000495400 GUCY2CP25092 1073 aa16.14■□□□□ 0.17
PTPN18-216ENST00000495400 FOXK2Q01167 660 aa16.14■□□□□ 0.17
PTPN18-216ENST00000495400 MCRS1Q96EZ8 462 aa16.14■□□□□ 0.17
PTPN18-216ENST00000495400 ZBTB45Q96K62 511 aaPredicted RBP16.14■□□□□ 0.17
PTPN18-216ENST00000495400 DDX23Q9BUQ8 820 aaKnown RBP16.14■□□□□ 0.17
PTPN18-216ENST00000495400 AVENQ9NQS1 362 aaPredicted RBP16.14■□□□□ 0.17
PTPN18-216ENST00000495400 GDE1Q9NZC3 331 aa16.14■□□□□ 0.17
PTPN18-216ENST00000495400 NUB1Q9Y5A7 615 aa16.14■□□□□ 0.17
PTPN18-216ENST00000495400 R4GN57 208 aa16.14■□□□□ 0.17
PTPN18-216ENST00000495400 VPS13AQ96RL7 3174 aa16.14■□□□□ 0.17
PTPN18-216ENST00000495400 PRRG1O14668 218 aa16.13■□□□□ 0.17
PTPN18-216ENST00000495400 TBC1D4O60343 1298 aa16.13■□□□□ 0.17
PTPN18-216ENST00000495400 LRRN2O75325 713 aa16.13■□□□□ 0.17
PTPN18-216ENST00000495400 ECI2O75521 394 aa16.13■□□□□ 0.17
PTPN18-216ENST00000495400 HARSP12081 509 aaKnown RBP16.13■□□□□ 0.17
PTPN18-216ENST00000495400 ATF2P15336 505 aa16.13■□□□□ 0.17
PTPN18-216ENST00000495400 SMTNP53814 917 aa16.13■□□□□ 0.17
PTPN18-216ENST00000495400 ARPP19P56211 112 aa16.13■□□□□ 0.17
PTPN18-216ENST00000495400 STRN3Q13033 797 aa16.13■□□□□ 0.17
PTPN18-216ENST00000495400 MRPL58Q14197 206 aaKnown RBP16.13■□□□□ 0.17
PTPN18-216ENST00000495400 ZRSR1Q15695 479 aaKnown RBP16.13■□□□□ 0.17
PTPN18-216ENST00000495400 SLC5A9Q2M3M2 681 aa16.13■□□□□ 0.17
PTPN18-216ENST00000495400 HYIQ5T013 277 aa16.13■□□□□ 0.17
PTPN18-216ENST00000495400 ZC3H14Q6PJT7 736 aaKnown RBP16.13■□□□□ 0.17
PTPN18-216ENST00000495400 TCEAL8Q8IYN2 117 aa16.13■□□□□ 0.17
PTPN18-216ENST00000495400 KCTD17Q8N5Z5 321 aa16.13■□□□□ 0.17
PTPN18-216ENST00000495400 SPIRE2Q8WWL2 714 aa16.13■□□□□ 0.17
PTPN18-216ENST00000495400 C18orf25Q96B23 403 aaPredicted RBP16.13■□□□□ 0.17
PTPN18-216ENST00000495400 OSBPL6Q9BZF3 934 aa16.13■□□□□ 0.17
PTPN18-216ENST00000495400 KIF3AQ9Y496 699 aa16.13■□□□□ 0.17
PTPN18-216ENST00000495400 COL4A3Q01955 1670 aa16.12■□□□□ 0.17
PTPN18-216ENST00000495400 EP300Q09472 2414 aaPredicted RBP16.12■□□□□ 0.17
PTPN18-216ENST00000495400 MEFVO15553 781 aaPredicted RBP16.12■□□□□ 0.17
PTPN18-216ENST00000495400 TOM1L1O75674 476 aa16.12■□□□□ 0.17
PTPN18-216ENST00000495400 PLS3P13797 630 aa16.12■□□□□ 0.17
PTPN18-216ENST00000495400 ATP2C1P98194 919 aaPredicted RBP16.12■□□□□ 0.17
PTPN18-216ENST00000495400 RAD51AP2Q09MP3 1159 aa16.12■□□□□ 0.17
PTPN18-216ENST00000495400 NOLC1Q14978 699 aaKnown RBP eCLIP16.12■□□□□ 0.17
PTPN18-216ENST00000495400 UBXN2BQ14CS0 331 aa16.12■□□□□ 0.17
PTPN18-216ENST00000495400 RILPL1Q5EBL4 403 aa16.12■□□□□ 0.17
PTPN18-216ENST00000495400 TPGS2Q68CL5 300 aa16.12■□□□□ 0.17
PTPN18-216ENST00000495400 MCTP1Q6DN14 999 aa16.12■□□□□ 0.17
PTPN18-216ENST00000495400 SYT2Q8N9I0 419 aaPredicted RBP16.12■□□□□ 0.17
PTPN18-216ENST00000495400 TMEM161BQ8NDZ6 487 aa16.12■□□□□ 0.17
PTPN18-216ENST00000495400 SUSD3Q96L08 255 aa16.12■□□□□ 0.17
PTPN18-216ENST00000495400 PNMA5Q96PV4 448 aa16.12■□□□□ 0.17
PTPN18-216ENST00000495400 BCO2Q9BYV7 579 aa16.12■□□□□ 0.17
PTPN18-216ENST00000495400 CYP4F11Q9HBI6 524 aa16.12■□□□□ 0.17
PTPN18-216ENST00000495400 FBXL5Q9UKA1 691 aa16.12■□□□□ 0.17
PTPN18-216ENST00000495400 MTF2Q9Y483 593 aaPredicted RBP16.12■□□□□ 0.17
PTPN18-216ENST00000495400 PATJQ8NI35 1801 aa16.12■□□□□ 0.17
PTPN18-216ENST00000495400 FAM170BA6NMN3 283 aa16.11■□□□□ 0.17
PTPN18-216ENST00000495400 ZNF197O14709 1029 aa16.11■□□□□ 0.17
PTPN18-216ENST00000495400 SEC24AO95486 1093 aa16.11■□□□□ 0.17
PTPN18-216ENST00000495400 CEBPBP17676 345 aa16.11■□□□□ 0.17
PTPN18-216ENST00000495400 MCM4P33991 863 aa16.11■□□□□ 0.17
PTPN18-216ENST00000495400 MAGEA9P43362 315 aa16.11■□□□□ 0.17
PTPN18-216ENST00000495400 ID4P47928 161 aa16.11■□□□□ 0.17
PTPN18-216ENST00000495400 SLC10A6Q3KNW5 377 aa16.11■□□□□ 0.17
PTPN18-216ENST00000495400 CTXN3Q4LDR2 81 aa16.11■□□□□ 0.17
PTPN18-216ENST00000495400 ZPBP2Q6X784 338 aa16.11■□□□□ 0.17
PTPN18-216ENST00000495400 APPL2Q8NEU8 664 aa16.11■□□□□ 0.17
PTPN18-216ENST00000495400 DDX12PQ92771 950 aa16.11■□□□□ 0.17
PTPN18-216ENST00000495400 CORO1BQ9BR76 489 aa16.11■□□□□ 0.17
PTPN18-216ENST00000495400 PLA2G2FQ9BZM2 168 aa16.11■□□□□ 0.17
PTPN18-216ENST00000495400 LTB4R2Q9NPC1 389 aa16.11■□□□□ 0.17
PTPN18-216ENST00000495400 ANKFY1Q9P2R3 1169 aa16.11■□□□□ 0.17
PTPN18-216ENST00000495400 INSL5Q9Y5Q6 135 aa16.11■□□□□ 0.17
PTPN18-216ENST00000495400 CLDN3O15551 220 aa16.1■□□□□ 0.17
PTPN18-216ENST00000495400 MICAL2O94851 1124 aa16.1■□□□□ 0.17
PTPN18-216ENST00000495400 MAPTP10636 758 aaKnown RBP16.1■□□□□ 0.17
PTPN18-216ENST00000495400 MCL1Q07820 350 aa16.1■□□□□ 0.17
PTPN18-216ENST00000495400 SEZ6Q53EL9 994 aa16.1■□□□□ 0.17
PTPN18-216ENST00000495400 PRSS36Q5K4E3 855 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms