RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 HELQQ8TDG4 1101 aa16.34■□□□□ 0.21
SDF4-207ENST00000494748 KIAA1586Q9HCI6 787 aa16.34■□□□□ 0.21
SDF4-207ENST00000494748 KCND2Q9NZV8 630 aa16.34■□□□□ 0.21
SDF4-207ENST00000494748 KLHL33A6NCF5 533 aa16.33■□□□□ 0.21
SDF4-207ENST00000494748 ADRB2P07550 413 aa16.33■□□□□ 0.21
SDF4-207ENST00000494748 VPS41P49754 854 aa16.33■□□□□ 0.21
SDF4-207ENST00000494748 PLEKHG4Q58EX7 1191 aa16.33■□□□□ 0.21
SDF4-207ENST00000494748 DAB2IPQ5VWQ8 1189 aa16.33■□□□□ 0.21
SDF4-207ENST00000494748 VSIG1Q86XK7 387 aa16.33■□□□□ 0.21
SDF4-207ENST00000494748 RIBC1Q8N443 379 aaPredicted RBP16.33■□□□□ 0.21
SDF4-207ENST00000494748 PIDD1Q9HB75 910 aa16.33■□□□□ 0.21
SDF4-207ENST00000494748 MAPK13O15264 365 aa16.33■□□□□ 0.2
SDF4-207ENST00000494748 ECE2O60344 883 aa16.33■□□□□ 0.2
SDF4-207ENST00000494748 ADCY8P40145 1251 aa16.33■□□□□ 0.2
SDF4-207ENST00000494748 PRELPP51888 382 aa16.33■□□□□ 0.2
SDF4-207ENST00000494748 SLC1A5Q15758 541 aa16.33■□□□□ 0.2
SDF4-207ENST00000494748 ACAD10Q6JQN1 1059 aa16.33■□□□□ 0.2
SDF4-207ENST00000494748 RFWD3Q6PCD5 774 aa16.33■□□□□ 0.2
SDF4-207ENST00000494748 ANKRD35Q8N283 1001 aa16.33■□□□□ 0.2
SDF4-207ENST00000494748 ATL2Q8NHH9 583 aa16.33■□□□□ 0.2
SDF4-207ENST00000494748 FAM118BQ9BPY3 351 aa16.33■□□□□ 0.2
SDF4-207ENST00000494748 LNPEPQ9UIQ6 1025 aa16.33■□□□□ 0.2
SDF4-207ENST00000494748 RAD21O60216 631 aa16.33■□□□□ 0.2
SDF4-207ENST00000494748 CALCAP01258 141 aa16.33■□□□□ 0.2
SDF4-207ENST00000494748 FDX1P10109 184 aa16.33■□□□□ 0.2
SDF4-207ENST00000494748 MAN1A1P33908 653 aa16.33■□□□□ 0.2
SDF4-207ENST00000494748 RPA3P35244 121 aaPredicted RBP16.33■□□□□ 0.2
SDF4-207ENST00000494748 PRR5LQ6MZQ0 368 aa16.33■□□□□ 0.2
SDF4-207ENST00000494748 STXBP4Q6ZWJ1 553 aa16.33■□□□□ 0.2
SDF4-207ENST00000494748 TDRPQ86YL5 185 aa16.33■□□□□ 0.2
SDF4-207ENST00000494748 ZNF276Q8N554 614 aa16.33■□□□□ 0.2
SDF4-207ENST00000494748 ZNF333Q96JL9 665 aa16.33■□□□□ 0.2
SDF4-207ENST00000494748 UNC45AQ9H3U1 944 aa16.33■□□□□ 0.2
SDF4-207ENST00000494748 TYROBPO43914 113 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 APOBEC3HQ6NTF7 200 aaKnown RBP16.32■□□□□ 0.2
SDF4-207ENST00000494748 EGFL6Q8IUX8 553 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 PHC3Q8NDX5 983 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 NRG4Q8WWG1 115 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 CCDC17Q96LX7 622 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 UMODL1Q5DID0 1318 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 CALRP27797 417 aaKnown RBP16.32■□□□□ 0.2
SDF4-207ENST00000494748 MRPS35P82673 323 aaKnown RBP16.32■□□□□ 0.2
SDF4-207ENST00000494748 SETDB1Q15047 1291 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 PKN2Q16513 984 aaKnown RBP16.32■□□□□ 0.2
SDF4-207ENST00000494748 IZUMO3Q5VZ72 239 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 LLGL2Q6P1M3 1020 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 SYCP3Q8IZU3 236 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 ZCCHC9Q8N567 271 aaKnown RBP16.32■□□□□ 0.2
SDF4-207ENST00000494748 GRK7Q8WTQ7 553 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 PDHA1P08559 390 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 MAGEA4P43358 317 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 RAB27AP51159 221 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 BIRC2Q13490 618 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 CLEC16AQ2KHT3 1053 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 OR52E8Q6IFG1 317 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 ZNF449Q6P9G9 518 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 OTOAQ7RTW8 1153 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 GLIS1Q8NBF1 620 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 ELMO3Q96BJ8 720 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 NACC1Q96RE7 527 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 UBN1Q9NPG3 1134 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 HSPBP1Q9NZL4 362 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 ANAPC7Q9UJX3 599 aa16.32■□□□□ 0.2
SDF4-207ENST00000494748 RPL26L1Q9UNX3 145 aaKnown RBP16.32■□□□□ 0.2
SDF4-207ENST00000494748 DCTN3O75935 186 aa16.31■□□□□ 0.2
SDF4-207ENST00000494748 GAS8O95995 478 aa16.31■□□□□ 0.2
SDF4-207ENST00000494748 PECAM1P16284 738 aaPredicted RBP16.31■□□□□ 0.2
SDF4-207ENST00000494748 SARNPP82979 210 aaKnown RBP16.31■□□□□ 0.2
SDF4-207ENST00000494748 CENPCQ03188 943 aa16.31■□□□□ 0.2
SDF4-207ENST00000494748 TAF1BQ53T94 588 aaPredicted RBP16.31■□□□□ 0.2
SDF4-207ENST00000494748 H0Y3Z8 333 aa16.31■□□□□ 0.2
SDF4-207ENST00000494748 K7ENM7 598 aa16.31■□□□□ 0.2
SDF4-207ENST00000494748 UNGP13051 313 aaPredicted RBP16.31■□□□□ 0.2
SDF4-207ENST00000494748 SP100P23497 879 aaPredicted RBP16.31■□□□□ 0.2
SDF4-207ENST00000494748 FASTKD3Q14CZ7 662 aaKnown RBP16.31■□□□□ 0.2
SDF4-207ENST00000494748 KHDC1Q4VXA5 237 aaKnown RBP16.31■□□□□ 0.2
SDF4-207ENST00000494748 FOXB2Q5VYV0 432 aa16.31■□□□□ 0.2
SDF4-207ENST00000494748 LARGE2Q8N3Y3 721 aa16.31■□□□□ 0.2
SDF4-207ENST00000494748 DHX38Q92620 1227 aaKnown RBP16.31■□□□□ 0.2
SDF4-207ENST00000494748 PAIP2Q9BPZ3 127 aaKnown RBP16.31■□□□□ 0.2
SDF4-207ENST00000494748 NMRK1Q9NWW6 199 aa16.31■□□□□ 0.2
SDF4-207ENST00000494748 NDUFB10O96000 172 aa16.31■□□□□ 0.2
SDF4-207ENST00000494748 RALAP11233 206 aa16.31■□□□□ 0.2
SDF4-207ENST00000494748 BMP3P12645 472 aa16.31■□□□□ 0.2
SDF4-207ENST00000494748 MXI1P50539 228 aa16.31■□□□□ 0.2
SDF4-207ENST00000494748 JAG1P78504 1218 aa16.31■□□□□ 0.2
SDF4-207ENST00000494748 C4orf50Q6ZRC1 276 aa16.31■□□□□ 0.2
SDF4-207ENST00000494748 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.31■□□□□ 0.21e-11■■■□□ 18.1
SDF4-207ENST00000494748 PPM1KQ8N3J5 372 aa16.31■□□□□ 0.2
SDF4-207ENST00000494748 GMCL1P1Q8NEA9 526 aa16.31■□□□□ 0.2
SDF4-207ENST00000494748 UCMAQ8WVF2 138 aa16.31■□□□□ 0.2
SDF4-207ENST00000494748 GMCL1Q96IK5 515 aa16.31■□□□□ 0.2
SDF4-207ENST00000494748 RBM15Q96T37 977 aaKnown RBP eCLIP16.31■□□□□ 0.27e-7■□□□□ 10.2
SDF4-207ENST00000494748 SNUPNO95149 360 aaKnown RBP16.3■□□□□ 0.2
SDF4-207ENST00000494748 ZNF76P36508 570 aa16.3■□□□□ 0.2
SDF4-207ENST00000494748 SCNN1DP51172 638 aa16.3■□□□□ 0.2
SDF4-207ENST00000494748 PTP4A2Q12974 167 aa16.3■□□□□ 0.2
SDF4-207ENST00000494748 CWF19L1Q69YN2 538 aaKnown RBP16.3■□□□□ 0.2
SDF4-207ENST00000494748 DNAJC9Q8WXX5 260 aa16.3■□□□□ 0.2
SDF4-207ENST00000494748 TRABDQ9H4I3 376 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms