RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 PRDM5Q9NQX1 630 aaPredicted RBP13.06□□□□□ -0.32
BRD3-206ENST00000494743 FAM207AQ9NSI2 230 aaPredicted RBP13.06□□□□□ -0.32
BRD3-206ENST00000494743 KLK14Q9P0G3 267 aa13.06□□□□□ -0.32
BRD3-206ENST00000494743 PARP2Q9UGN5 583 aa13.06□□□□□ -0.32
BRD3-206ENST00000494743 RAPGEFL1Q9UHV5 662 aa13.06□□□□□ -0.32
BRD3-206ENST00000494743 SIX4Q9UIU6 781 aa13.06□□□□□ -0.32
BRD3-206ENST00000494743 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.05□□□□□ -0.32
BRD3-206ENST00000494743 ENPP3O14638 875 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 EOMESO95936 686 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 HLA-DRAP01903 254 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 TNNC2P02585 160 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 UCHL3P15374 230 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 RAG1P15918 1043 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 TRIM21P19474 475 aaKnown RBP13.05□□□□□ -0.32
BRD3-206ENST00000494743 DEKP35659 375 aaKnown RBP13.05□□□□□ -0.32
BRD3-206ENST00000494743 MLH1P40692 756 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 AFF1P51825 1210 aaKnown RBP13.05□□□□□ -0.32
BRD3-206ENST00000494743 BIRC3Q13489 604 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 NCOA4Q13772 614 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 ARID5BQ14865 1188 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 CNKSR3Q6P9H4 555 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 DEFB128Q7Z7B8 93 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 CRIPAKQ8N1N5 446 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 TMEM130Q8N3G9 435 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 TC2NQ8N9U0 490 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 NEK11Q8NG66 645 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 PGBD4Q96DM1 585 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 ANKRD36BP1Q96IX9 119 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 ZFP42Q96MM3 310 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 GUCD1Q96NT3 240 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 PPP1R10Q96QC0 940 aaKnown RBP13.05□□□□□ -0.32
BRD3-206ENST00000494743 NAA15Q9BXJ9 866 aaKnown RBP13.05□□□□□ -0.32
BRD3-206ENST00000494743 EDEM3Q9BZQ6 932 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 ELAC1Q9H777 363 aaKnown RBP13.05□□□□□ -0.32
BRD3-206ENST00000494743 UBN1Q9NPG3 1134 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 APEX2Q9UBZ4 518 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 TUBGCP4Q9UGJ1 667 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 AJAP1Q9UKB5 411 aaPredicted RBP13.05□□□□□ -0.32
BRD3-206ENST00000494743 CAPN11Q9UMQ6 739 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 DAAM1Q9Y4D1 1078 aa13.05□□□□□ -0.32
BRD3-206ENST00000494743 RALGAPA2Q2PPJ7 1873 aa13.04□□□□□ -0.32
BRD3-206ENST00000494743 ARL5CA6NH57 179 aa13.04□□□□□ -0.32
BRD3-206ENST00000494743 TULP1O00294 542 aaPredicted RBP13.04□□□□□ -0.32
BRD3-206ENST00000494743 MFAP3LO75121 409 aa13.04□□□□□ -0.32
BRD3-206ENST00000494743 ZC3H11AO75152 810 aaKnown RBP eCLIP13.04□□□□□ -0.32
BRD3-206ENST00000494743 CST3P01034 146 aaPredicted RBP13.04□□□□□ -0.32
BRD3-206ENST00000494743 CSF2RAP15509 400 aa13.04□□□□□ -0.32
BRD3-206ENST00000494743 RFX1P22670 979 aa13.04□□□□□ -0.32
BRD3-206ENST00000494743 CASP14P31944 242 aa13.04□□□□□ -0.32
BRD3-206ENST00000494743 PIK3CAP42336 1068 aa13.04□□□□□ -0.32
BRD3-206ENST00000494743 GSDMDP57764 484 aa13.04□□□□□ -0.32
BRD3-206ENST00000494743 NAB2Q15742 525 aa13.04□□□□□ -0.32
BRD3-206ENST00000494743 GLRA4Q5JXX5 417 aa13.04□□□□□ -0.32
BRD3-206ENST00000494743 PHLDB3Q6NSJ2 640 aa13.04□□□□□ -0.32
BRD3-206ENST00000494743 CCDC186Q7Z3E2 898 aa13.04□□□□□ -0.32
BRD3-206ENST00000494743 PPFIBP1Q86W92 1011 aa13.04□□□□□ -0.32
BRD3-206ENST00000494743 CACTINQ8WUQ7 758 aaKnown RBP13.04□□□□□ -0.32
BRD3-206ENST00000494743 BAP1Q92560 729 aa13.04□□□□□ -0.32
BRD3-206ENST00000494743 C18orf25Q96B23 403 aaPredicted RBP13.04□□□□□ -0.32
BRD3-206ENST00000494743 PCMTD1Q96MG8 357 aaPredicted RBP13.04□□□□□ -0.32
BRD3-206ENST00000494743 GAD1Q99259 594 aa13.04□□□□□ -0.32
BRD3-206ENST00000494743 XYLT2Q9H1B5 865 aa13.04□□□□□ -0.32
BRD3-206ENST00000494743 RSAD1Q9HA92 442 aa13.04□□□□□ -0.32
BRD3-206ENST00000494743 APOBEC3GQ9HC16 384 aaKnown RBP13.04□□□□□ -0.32
BRD3-206ENST00000494743 RNF19AQ9NV58 838 aa13.04□□□□□ -0.32
BRD3-206ENST00000494743 TMEM161AQ9NX61 479 aa13.04□□□□□ -0.32
BRD3-206ENST00000494743 CEP72Q9P209 647 aa13.04□□□□□ -0.32
BRD3-206ENST00000494743 ITGA11Q9UKX5 1188 aa13.04□□□□□ -0.32
BRD3-206ENST00000494743 ZMYND8Q9ULU4 1186 aaPredicted RBP13.04□□□□□ -0.32
BRD3-206ENST00000494743 UBQLN1Q9UMX0 589 aaKnown RBP13.04□□□□□ -0.32
BRD3-206ENST00000494743 PLAGL2Q9UPG8 496 aa13.04□□□□□ -0.32
BRD3-206ENST00000494743 FHOD1Q9Y613 1164 aa13.04□□□□□ -0.32
BRD3-206ENST00000494743 GOLGA6L6A8MZA4 724 aa13.03□□□□□ -0.32
BRD3-206ENST00000494743 AKR1B15C9JRZ8 316 aaPredicted RBP13.03□□□□□ -0.32
BRD3-206ENST00000494743 OFD1O75665 1012 aa13.03□□□□□ -0.32
BRD3-206ENST00000494743 STAU1O95793 577 aaKnown RBP13.03□□□□□ -0.32
BRD3-206ENST00000494743 ASS1P00966 412 aaKnown RBP13.03□□□□□ -0.32
BRD3-206ENST00000494743 ITGB3P05106 788 aa13.03□□□□□ -0.32
BRD3-206ENST00000494743 PFKMP08237 780 aa13.03□□□□□ -0.32
BRD3-206ENST00000494743 CYP3A5P20815 502 aa13.03□□□□□ -0.32
BRD3-206ENST00000494743 GUCY2FP51841 1108 aa13.03□□□□□ -0.32
BRD3-206ENST00000494743 SOX4Q06945 474 aaPredicted RBP13.03□□□□□ -0.32
BRD3-206ENST00000494743 GOLGA8FQ08AF8 430 aa13.03□□□□□ -0.32
BRD3-206ENST00000494743 GOLGA8DPQ0D2H9 430 aa13.03□□□□□ -0.32
BRD3-206ENST00000494743 IQCEQ6IPM2 695 aa13.03□□□□□ -0.32
BRD3-206ENST00000494743 GJB7Q6PEY0 223 aa13.03□□□□□ -0.32
BRD3-206ENST00000494743 CNGA4Q8IV77 575 aa13.03□□□□□ -0.32
BRD3-206ENST00000494743 ARHGEF19Q8IW93 802 aa13.03□□□□□ -0.32
BRD3-206ENST00000494743 C7orf61Q8IZ16 206 aa13.03□□□□□ -0.32
BRD3-206ENST00000494743 TMEM199Q8N511 208 aa13.03□□□□□ -0.32
BRD3-206ENST00000494743 BEST2Q8NFU1 509 aa13.03□□□□□ -0.32
BRD3-206ENST00000494743 HELQQ8TDG4 1101 aa13.03□□□□□ -0.32
BRD3-206ENST00000494743 FAM122AQ96E09 287 aa13.03□□□□□ -0.32
BRD3-206ENST00000494743 DNAJC7Q99615 494 aa13.03□□□□□ -0.32
BRD3-206ENST00000494743 PI4K2AQ9BTU6 479 aa13.03□□□□□ -0.32
BRD3-206ENST00000494743 VRTNQ9H8Y1 702 aa13.03□□□□□ -0.32
BRD3-206ENST00000494743 MIOSQ9NXC5 875 aa13.03□□□□□ -0.32
BRD3-206ENST00000494743 DPP3Q9NY33 737 aa13.03□□□□□ -0.32
BRD3-206ENST00000494743 ANO9A1A5B4 782 aa13.02□□□□□ -0.33
BRD3-206ENST00000494743 XPOTO43592 962 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms