RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 ADAM9Q13443 819 aa12.06□□□□□ -0.48
APTX-230ENST00000494649 CAVIN1Q6NZI2 390 aaKnown RBP12.06□□□□□ -0.48
APTX-230ENST00000494649 FUT10Q6P4F1 479 aa12.06□□□□□ -0.48
APTX-230ENST00000494649 OR5B17Q8NGF7 314 aa12.06□□□□□ -0.48
APTX-230ENST00000494649 ELMO3Q96BJ8 720 aa12.06□□□□□ -0.48
APTX-230ENST00000494649 MRPL38Q96DV4 380 aaKnown RBP12.06□□□□□ -0.48
APTX-230ENST00000494649 COLEC11Q9BWP8 271 aa12.06□□□□□ -0.48
APTX-230ENST00000494649 MMRN2Q9H8L6 949 aa12.06□□□□□ -0.48
APTX-230ENST00000494649 SLC38A7Q9NVC3 462 aa12.06□□□□□ -0.48
APTX-230ENST00000494649 UBQLN1Q9UMX0 589 aaKnown RBP12.06□□□□□ -0.48
APTX-230ENST00000494649 NUB1Q9Y5A7 615 aa12.06□□□□□ -0.48
APTX-230ENST00000494649 C5orf42Q9H799 3197 aa12.05□□□□□ -0.48
APTX-230ENST00000494649 ANK1P16157 1881 aa12.05□□□□□ -0.48
APTX-230ENST00000494649 PPP1R3GB7ZBB8 358 aa12.05□□□□□ -0.48
APTX-230ENST00000494649 AKAP3O75969 853 aa12.05□□□□□ -0.48
APTX-230ENST00000494649 KRT19P08727 400 aa12.05□□□□□ -0.48
APTX-230ENST00000494649 TNNI1P19237 187 aa12.05□□□□□ -0.48
APTX-230ENST00000494649 CYP24A1Q07973 514 aa12.05□□□□□ -0.48
APTX-230ENST00000494649 ZBTB6Q15916 424 aa12.05□□□□□ -0.48
APTX-230ENST00000494649 PTPROQ16827 1216 aa12.05□□□□□ -0.48
APTX-230ENST00000494649 DPCR1Q3MIW9 517 aa12.05□□□□□ -0.48
APTX-230ENST00000494649 ZCWPW2Q504Y3 356 aa12.05□□□□□ -0.48
APTX-230ENST00000494649 TCEAL5Q5H9L2 206 aa12.05□□□□□ -0.48
APTX-230ENST00000494649 FAM171A1Q5VUB5 890 aa12.05□□□□□ -0.48
APTX-230ENST00000494649 MAFAQ8NHW3 353 aaPredicted RBP12.05□□□□□ -0.48
APTX-230ENST00000494649 PLEKHO2Q8TD55 490 aa12.05□□□□□ -0.48
APTX-230ENST00000494649 NELFBQ8WX92 580 aa12.05□□□□□ -0.48
APTX-230ENST00000494649 PRDM6Q9NQX0 595 aa12.05□□□□□ -0.48
APTX-230ENST00000494649 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.05□□□□□ -0.482e-7■■■■■ 86.5
APTX-230ENST00000494649 TMEM63CQ9P1W3 806 aa12.05□□□□□ -0.48
APTX-230ENST00000494649 TRAF3IP3Q9Y228 551 aa12.05□□□□□ -0.48
APTX-230ENST00000494649 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.04□□□□□ -0.48
APTX-230ENST00000494649 PSMA7O14818 248 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 CLSTN1O94985 981 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 ITGB3P05106 788 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 RPL17P18621 184 aaKnown RBP12.04□□□□□ -0.48
APTX-230ENST00000494649 STIM1Q13586 685 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 KIAA1841Q6NSI8 718 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 PRSS55Q6UWB4 352 aaPredicted RBP12.04□□□□□ -0.48
APTX-230ENST00000494649 CD300LGQ6UXG3 332 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 DDX53Q86TM3 631 aaKnown RBP12.04□□□□□ -0.48
APTX-230ENST00000494649 BEST2Q8NFU1 509 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 GOLGA5Q8TBA6 731 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 RSPH1Q8WYR4 309 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 FBXL18Q96ME1 805 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 FNBP1Q96RU3 617 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 ASB7Q9H672 318 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 DPP3Q9NY33 737 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 TIMM13Q9Y5L4 95 aaPredicted RBP12.04□□□□□ -0.48
APTX-230ENST00000494649 ATG2AQ2TAZ0 1938 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 IL18RAPO95256 599 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 CXCL14O95715 111 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 MBD3O95983 291 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 TMEM191BP0C7N4 346 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 TRIM49P0CI25 452 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 TRIM49CP0CI26 452 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 NRIP1P48552 1158 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 RTP2Q5QGT7 225 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 SPATA1Q5VX52 437 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 CREBRFQ8IUR6 639 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 C12orf56Q8IXR9 622 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 CSGALNACT2Q8N6G5 542 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 GZF1Q9H116 711 aaPredicted RBP12.04□□□□□ -0.48
APTX-230ENST00000494649 ZBP1Q9H171 429 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 DMAC2Q9NW81 257 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 FRMD4BQ9Y2L6 1034 aa12.04□□□□□ -0.48
APTX-230ENST00000494649 PDCD11Q14690 1871 aaKnown RBP12.03□□□□□ -0.48
APTX-230ENST00000494649 SF3B1O75533 1304 aaKnown RBP eCLIP12.03□□□□□ -0.485e-11■■■■■ 34.5
APTX-230ENST00000494649 SPTLC1O15269 473 aa12.03□□□□□ -0.48
APTX-230ENST00000494649 LINC01565O15544 149 aa12.03□□□□□ -0.48
APTX-230ENST00000494649 TKTP29401 623 aaKnown RBP12.03□□□□□ -0.48
APTX-230ENST00000494649 POLR2BP30876 1174 aaKnown RBP12.03□□□□□ -0.48
APTX-230ENST00000494649 C9orf57Q5W0N0 161 aa12.03□□□□□ -0.48
APTX-230ENST00000494649 CENPPQ6IPU0 288 aa12.03□□□□□ -0.48
APTX-230ENST00000494649 LLGL2Q6P1M3 1020 aa12.03□□□□□ -0.48
APTX-230ENST00000494649 DCLRE1AQ6PJP8 1040 aa12.03□□□□□ -0.48
APTX-230ENST00000494649 CD302Q8IX05 232 aa12.03□□□□□ -0.48
APTX-230ENST00000494649 C1orf127Q8N9H9 656 aa12.03□□□□□ -0.48
APTX-230ENST00000494649 RIN2Q8WYP3 895 aaPredicted RBP12.03□□□□□ -0.48
APTX-230ENST00000494649 TSG101Q99816 390 aa12.03□□□□□ -0.48
APTX-230ENST00000494649 C2CD2Q9Y426 696 aa12.03□□□□□ -0.48
APTX-230ENST00000494649 LRRIQ3A6PVS8 624 aaPredicted RBP12.02□□□□□ -0.48
APTX-230ENST00000494649 KIAA0391O15091 583 aaKnown RBP12.02□□□□□ -0.48
APTX-230ENST00000494649 SOD2P04179 222 aa12.02□□□□□ -0.48
APTX-230ENST00000494649 CCNE1P24864 410 aa12.02□□□□□ -0.48
APTX-230ENST00000494649 SNRPFP62306 86 aaKnown RBP12.02□□□□□ -0.48
APTX-230ENST00000494649 PAK1Q13153 545 aa12.02□□□□□ -0.48
APTX-230ENST00000494649 TIGD5Q53EQ6 642 aa12.02□□□□□ -0.48
APTX-230ENST00000494649 HSP90AA4PQ58FG1 418 aa12.02□□□□□ -0.48
APTX-230ENST00000494649 FAM186BQ8IYM0 893 aa12.02□□□□□ -0.48
APTX-230ENST00000494649 ZNF516Q92618 1163 aa12.02□□□□□ -0.48
APTX-230ENST00000494649 UROC1Q96N76 676 aa12.02□□□□□ -0.48
APTX-230ENST00000494649 NSUN3Q9H649 340 aaKnown RBP12.02□□□□□ -0.48
APTX-230ENST00000494649 KIAA1586Q9HCI6 787 aa12.02□□□□□ -0.48
APTX-230ENST00000494649 CGNQ9P2M7 1197 aaKnown RBP12.02□□□□□ -0.48
APTX-230ENST00000494649 AGAP1Q9UPQ3 857 aa12.02□□□□□ -0.48
APTX-230ENST00000494649 STXBP5LQ9Y2K9 1186 aa12.02□□□□□ -0.48
APTX-230ENST00000494649 C2orf71A6NGG8 1288 aa12.02□□□□□ -0.49
APTX-230ENST00000494649 XPOTO43592 962 aaKnown RBP12.02□□□□□ -0.49
APTX-230ENST00000494649 URODP06132 367 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms