RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 ACAP1Q15027 740 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 PLCB4Q15147 1175 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 FKBP15Q5T1M5 1219 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 USP49Q70CQ1 688 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 ENAHQ8N8S7 591 aaPredicted RBP11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 OXER1Q8TDS5 423 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 DNAJB3Q8WWF6 145 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 RUFY1Q96T51 708 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 SELENOOQ9BVL4 669 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 LRRC27Q9C0I9 530 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 CWH43Q9H720 699 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 ZSWIM4Q9H7M6 989 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 JMJD4Q9H9V9 463 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 KBTBD4Q9NVX7 518 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 TAB2Q9NYJ8 693 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 DLGAP2Q9P1A6 1054 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 PADI3Q9ULW8 664 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 SNX12Q9UMY4 172 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 HYOU1Q9Y4L1 999 aa11.5□□□□□ -0.57
PDLIM1-205ENST00000493949 GRID2IPA4D2P6 1211 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 EIF3HO15372 352 aaKnown RBP eCLIP11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 SLC26A4O43511 780 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 LAG3P18627 525 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 CCNE1P24864 410 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 PAFAH1B1P43034 410 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 GTF2A1P52655 376 aaPredicted RBP11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 STX17P56962 302 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 LMNB2Q03252 620 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 NPY5RQ15761 445 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 HSP90AA4PQ58FG1 418 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 ATAT1Q5SQI0 421 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 VARS2Q5ST30 1063 aaKnown RBP11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 SPOUT1Q5T280 376 aaKnown RBP11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 CCDC91Q7Z6B0 441 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 TAX1BP1Q86VP1 789 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 CD302Q8IX05 232 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 STAG2Q8N3U4 1231 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 RIN2Q8WYP3 895 aaPredicted RBP11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 COL26A1Q96A83 441 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 ZBTB10Q96DT7 871 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 LZTS2Q9BRK4 669 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 VPS16Q9H269 839 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 ENTPD7Q9NQZ7 604 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 TYW1Q9NV66 732 aaKnown RBP11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 DBR1Q9UK59 544 aaKnown RBP11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 FBXL21Q9UKT6 434 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 CDV3Q9UKY7 258 aaKnown RBP11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 LRFN2Q9ULH4 789 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 GUCA1BQ9UMX6 200 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 IGSF9BQ9UPX0 1349 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 SPEGQ15772 3267 aa11.49□□□□□ -0.57
PDLIM1-205ENST00000493949 SSU72P8A0A1W2PR75 194 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 KRBA1A5PL33 1030 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 HSF2BPO75031 334 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 N4BP1O75113 896 aaKnown RBP11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 ATP1A1P05023 1023 aaKnown RBP11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 TRIM21P19474 475 aaKnown RBP11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 CCND2P30279 289 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 PRCPP42785 496 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 SETQ01105 290 aaPredicted RBP11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 SLC35G1Q2M3R5 365 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 MARCH8Q5T0T0 291 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 IER5Q5VY09 327 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 NCAPH2Q6IBW4 605 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 PHLDB3Q6NSJ2 640 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 TTI2Q6NXR4 508 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 CNNM4Q6P4Q7 775 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 WDR59Q6PJI9 974 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 DTHD1Q6ZMT9 781 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 CYFIP1Q7L576 1253 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 C1orf210Q8IVY1 113 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 ARFGAP2Q8N6H7 521 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 MRPL43Q8N983 215 aaKnown RBP11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 PNMA1Q8ND90 353 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 SYN2Q92777 582 aaPredicted RBP11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 ACSF2Q96CM8 615 aaPredicted RBP11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 INPP4AQ96PE3 977 aaPredicted RBP11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 CAPS2Q9BXY5 557 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 KCNK12Q9HB15 430 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 DZANK1Q9NVP4 752 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 VPS54Q9P1Q0 977 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 IGSF9Q9P2J2 1179 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 LCMT1Q9UIC8 334 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 RALYQ9UKM9 306 aaKnown RBP11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 PCDHB7Q9Y5E2 793 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 KDM3AQ9Y4C1 1321 aa11.48□□□□□ -0.57
PDLIM1-205ENST00000493949 C2orf71A6NGG8 1288 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 TBKBP1A7MCY6 615 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 SPATA31C2B4DYI2 1134 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 hCG_1984214I3L0E3 225 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 TRIM66O15016 1216 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 SPTLC1O15269 473 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 CLASP2O75122 1294 aaKnown RBP11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 STAM2O75886 525 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 ERLIN2O94905 339 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 WEE2P0C1S8 567 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 IDEP14735 1019 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 ANXA13P27216 316 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 PPM1AP35813 382 aa11.47□□□□□ -0.57
PDLIM1-205ENST00000493949 NLRP5P59047 1200 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms