RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 DCDC2BA2VCK2 349 aa19.43■□□□□ 0.7
NUP50-218ENST00000493456 ABLIM3O94929 683 aa19.43■□□□□ 0.7
NUP50-218ENST00000493456 CTDNEP1O95476 244 aa19.43■□□□□ 0.7
NUP50-218ENST00000493456 ADRB1P08588 477 aa19.43■□□□□ 0.7
NUP50-218ENST00000493456 ATF2P15336 505 aa19.43■□□□□ 0.7
NUP50-218ENST00000493456 LIG1P18858 919 aa19.43■□□□□ 0.7
NUP50-218ENST00000493456 GRM2Q14416 872 aa19.43■□□□□ 0.7
NUP50-218ENST00000493456 POTEHQ6S545 545 aa19.43■□□□□ 0.7
NUP50-218ENST00000493456 PDZD4Q76G19 769 aaPredicted RBP19.43■□□□□ 0.7
NUP50-218ENST00000493456 CATSPER3Q86XQ3 398 aa19.43■□□□□ 0.7
NUP50-218ENST00000493456 TCEAL8Q8IYN2 117 aa19.43■□□□□ 0.7
NUP50-218ENST00000493456 C3orf58Q8NDZ4 430 aa19.43■□□□□ 0.7
NUP50-218ENST00000493456 NETO1Q8TDF5 533 aa19.43■□□□□ 0.7
NUP50-218ENST00000493456 ASB16Q96NS5 453 aa19.43■□□□□ 0.7
NUP50-218ENST00000493456 CORO1BQ9BR76 489 aa19.43■□□□□ 0.7
NUP50-218ENST00000493456 POLR3CQ9BUI4 534 aaPredicted RBP19.43■□□□□ 0.7
NUP50-218ENST00000493456 TPCN1Q9ULQ1 816 aa19.43■□□□□ 0.7
NUP50-218ENST00000493456 COL4A2P08572 1712 aa19.42■□□□□ 0.7
NUP50-218ENST00000493456 WDR27A2RRH5 827 aa19.42■□□□□ 0.7
NUP50-218ENST00000493456 ARHGEF35A5YM69 484 aa19.42■□□□□ 0.7
NUP50-218ENST00000493456 MED24O75448 989 aa19.42■□□□□ 0.7
NUP50-218ENST00000493456 EDN1P05305 212 aa19.42■□□□□ 0.7
NUP50-218ENST00000493456 RETP07949 1114 aa19.42■□□□□ 0.7
NUP50-218ENST00000493456 CYP11B2P19099 503 aa19.42■□□□□ 0.7
NUP50-218ENST00000493456 IGFBP6P24592 240 aaPredicted RBP19.42■□□□□ 0.7
NUP50-218ENST00000493456 FAM78AQ5JUQ0 283 aa19.42■□□□□ 0.7
NUP50-218ENST00000493456 ATF7IP2Q5U623 682 aa19.42■□□□□ 0.7
NUP50-218ENST00000493456 PADI6Q6TGC4 694 aa19.42■□□□□ 0.7
NUP50-218ENST00000493456 MAP4K3Q8IVH8 894 aa19.42■□□□□ 0.7
NUP50-218ENST00000493456 ELMOD1Q8N336 334 aa19.42■□□□□ 0.7
NUP50-218ENST00000493456 DEPDC1BQ8WUY9 529 aa19.42■□□□□ 0.7
NUP50-218ENST00000493456 FAM3CQ92520 227 aa19.42■□□□□ 0.7
NUP50-218ENST00000493456 IFT74Q96LB3 600 aa19.42■□□□□ 0.7
NUP50-218ENST00000493456 GOLGA2P5Q9HBQ8 144 aa19.42■□□□□ 0.7
NUP50-218ENST00000493456 TOPORSQ9NS56 1045 aaPredicted RBP19.42■□□□□ 0.7
NUP50-218ENST00000493456 SLC38A7Q9NVC3 462 aa19.42■□□□□ 0.7
NUP50-218ENST00000493456 USP20Q9Y2K6 914 aa19.42■□□□□ 0.7
NUP50-218ENST00000493456 CHD8Q9HCK8 2581 aa19.42■□□□□ 0.7
NUP50-218ENST00000493456 H7C4K7 107 aa19.41■□□□□ 0.7
NUP50-218ENST00000493456 I3L4J1 428 aa19.41■□□□□ 0.7
NUP50-218ENST00000493456 SYN3O14994 580 aa19.41■□□□□ 0.7
NUP50-218ENST00000493456 PSMC3P17980 439 aa19.41■□□□□ 0.7
NUP50-218ENST00000493456 BRCC3P46736 316 aa19.41■□□□□ 0.7
NUP50-218ENST00000493456 YARSP54577 528 aaKnown RBP19.41■□□□□ 0.7
NUP50-218ENST00000493456 SPEM2Q0P670 501 aa19.41■□□□□ 0.7
NUP50-218ENST00000493456 TPGS2Q68CL5 300 aa19.41■□□□□ 0.7
NUP50-218ENST00000493456 SMARCD2Q92925 531 aa19.41■□□□□ 0.7
NUP50-218ENST00000493456 TCEAL4Q96EI5 215 aa19.41■□□□□ 0.7
NUP50-218ENST00000493456 MSANTD3Q96H12 275 aa19.41■□□□□ 0.7
NUP50-218ENST00000493456 CYP4F11Q9HBI6 524 aa19.41■□□□□ 0.7
NUP50-218ENST00000493456 ZNF334Q9HCZ1 680 aaPredicted RBP19.41■□□□□ 0.7
NUP50-218ENST00000493456 INSL5Q9Y5Q6 135 aa19.41■□□□□ 0.7
NUP50-218ENST00000493456 PIAS3Q9Y6X2 628 aa19.41■□□□□ 0.7
NUP50-218ENST00000493456 SMIM28A0A1B0GU29 152 aa19.4■□□□□ 0.7
NUP50-218ENST00000493456 BTBD18B2RXH4 712 aa19.4■□□□□ 0.7
NUP50-218ENST00000493456 WNT7AO00755 349 aa19.4■□□□□ 0.7
NUP50-218ENST00000493456 SLC30A4O14863 429 aa19.4■□□□□ 0.7
NUP50-218ENST00000493456 FDPSP14324 419 aaKnown RBP19.4■□□□□ 0.7
NUP50-218ENST00000493456 RPA1P27694 616 aa19.4■□□□□ 0.7
NUP50-218ENST00000493456 GDI1P31150 447 aa19.4■□□□□ 0.7
NUP50-218ENST00000493456 CYP4A22Q5TCH4 519 aa19.4■□□□□ 0.7
NUP50-218ENST00000493456 IQCEQ6IPM2 695 aa19.4■□□□□ 0.7
NUP50-218ENST00000493456 C1orf228Q6PIY5 440 aa19.4■□□□□ 0.7
NUP50-218ENST00000493456 DIS3L2Q8IYB7 885 aaKnown RBP19.4■□□□□ 0.7
NUP50-218ENST00000493456 LEMD2Q8NC56 503 aa19.4■□□□□ 0.7
NUP50-218ENST00000493456 ERMNQ8TAM6 284 aa19.4■□□□□ 0.7
NUP50-218ENST00000493456 LMAN1LQ9HAT1 526 aa19.4■□□□□ 0.7
NUP50-218ENST00000493456 MAFFQ9ULX9 164 aa19.4■□□□□ 0.7
NUP50-218ENST00000493456 F5P12259 2224 aa19.4■□□□□ 0.7
NUP50-218ENST00000493456 PODXLO00592 558 aa19.39■□□□□ 0.69
NUP50-218ENST00000493456 MUTP22033 750 aa19.39■□□□□ 0.69
NUP50-218ENST00000493456 GRM5P41594 1212 aa19.39■□□□□ 0.69
NUP50-218ENST00000493456 CCR2P41597 374 aa19.39■□□□□ 0.69
NUP50-218ENST00000493456 MLLT6P55198 1093 aaPredicted RBP19.39■□□□□ 0.69
NUP50-218ENST00000493456 ANKRD1Q15327 319 aa19.39■□□□□ 0.69
NUP50-218ENST00000493456 LPAL2Q16609 132 aa19.39■□□□□ 0.69
NUP50-218ENST00000493456 ST3GAL2Q16842 350 aa19.39■□□□□ 0.69
NUP50-218ENST00000493456 XKR4Q5GH76 650 aa19.39■□□□□ 0.69
NUP50-218ENST00000493456 NT5DC1Q5TFE4 455 aa19.39■□□□□ 0.69
NUP50-218ENST00000493456 VITQ6UXI7 678 aa19.39■□□□□ 0.69
NUP50-218ENST00000493456 PRR23BQ6ZRT6 265 aa19.39■□□□□ 0.69
NUP50-218ENST00000493456 KIFAP3Q92845 792 aa19.39■□□□□ 0.69
NUP50-218ENST00000493456 KIFC3Q9BVG8 833 aa19.39■□□□□ 0.69
NUP50-218ENST00000493456 CCDC94Q9BW85 323 aaPredicted RBP19.39■□□□□ 0.69
NUP50-218ENST00000493456 TMEM60Q9H2L4 133 aa19.39■□□□□ 0.69
NUP50-218ENST00000493456 TRPV4Q9HBA0 871 aa19.39■□□□□ 0.69
NUP50-218ENST00000493456 TNFSF13BQ9Y275 285 aa19.39■□□□□ 0.69
NUP50-218ENST00000493456 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.39■□□□□ 0.69
NUP50-218ENST00000493456 FOXD2O60548 495 aaPredicted RBP19.38■□□□□ 0.69
NUP50-218ENST00000493456 DTNBO60941 627 aa19.38■□□□□ 0.69
NUP50-218ENST00000493456 CNR2P34972 360 aa19.38■□□□□ 0.69
NUP50-218ENST00000493456 CXCL12P48061 93 aa19.38■□□□□ 0.69
NUP50-218ENST00000493456 ARPP19P56211 112 aa19.38■□□□□ 0.69
NUP50-218ENST00000493456 SOX4Q06945 474 aaPredicted RBP19.38■□□□□ 0.69
NUP50-218ENST00000493456 TRIM29Q14134 588 aa19.38■□□□□ 0.69
NUP50-218ENST00000493456 MRPL58Q14197 206 aaKnown RBP19.38■□□□□ 0.69
NUP50-218ENST00000493456 PPM1JQ5JR12 505 aa19.38■□□□□ 0.69
NUP50-218ENST00000493456 ALKAL1Q6UXT8 129 aa19.38■□□□□ 0.69
NUP50-218ENST00000493456 E2F7Q96AV8 911 aa19.38■□□□□ 0.69
NUP50-218ENST00000493456 ZNF512Q96ME7 567 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms