RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 DMWDQ09019 674 aa7.43□□□□□ -1.22
VPS52-219ENST00000493379 CAPSQ13938 189 aa7.43□□□□□ -1.22
VPS52-219ENST00000493379 GIT2Q14161 759 aa7.43□□□□□ -1.22
VPS52-219ENST00000493379 KARSQ15046 597 aaKnown RBP7.43□□□□□ -1.22
VPS52-219ENST00000493379 KIAA0319Q5VV43 1072 aa7.43□□□□□ -1.22
VPS52-219ENST00000493379 CCDC73Q6ZRK6 1079 aa7.43□□□□□ -1.22
VPS52-219ENST00000493379 RHPN2Q8IUC4 686 aa7.43□□□□□ -1.22
VPS52-219ENST00000493379 ASAP3Q8TDY4 903 aa7.43□□□□□ -1.22
VPS52-219ENST00000493379 LINC01599Q8WXQ3 324 aa7.43□□□□□ -1.22
VPS52-219ENST00000493379 RSPH1Q8WYR4 309 aa7.43□□□□□ -1.22
VPS52-219ENST00000493379 RAD54LQ92698 747 aa7.43□□□□□ -1.22
VPS52-219ENST00000493379 FIZ1Q96SL8 496 aa7.43□□□□□ -1.22
VPS52-219ENST00000493379 INSM2Q96T92 566 aaPredicted RBP7.43□□□□□ -1.22
VPS52-219ENST00000493379 FAM129BQ96TA1 746 aa7.43□□□□□ -1.22
VPS52-219ENST00000493379 OSMRQ99650 979 aa7.43□□□□□ -1.22
VPS52-219ENST00000493379 STRA6Q9BX79 667 aa7.43□□□□□ -1.22
VPS52-219ENST00000493379 ST6GALNAC4Q9H4F1 302 aa7.43□□□□□ -1.22
VPS52-219ENST00000493379 MINDY3Q9H8M7 445 aa7.43□□□□□ -1.22
VPS52-219ENST00000493379 C1orf112Q9NSG2 853 aa7.43□□□□□ -1.22
VPS52-219ENST00000493379 LMCD1Q9NZU5 365 aa7.43□□□□□ -1.22
VPS52-219ENST00000493379 KLK14Q9P0G3 267 aa7.43□□□□□ -1.22
VPS52-219ENST00000493379 ARHGAP28Q9P2N2 729 aa7.43□□□□□ -1.22
VPS52-219ENST00000493379 CCDC39Q9UFE4 941 aa7.43□□□□□ -1.22
VPS52-219ENST00000493379 ODF2LQ9ULJ1 636 aa7.43□□□□□ -1.22
VPS52-219ENST00000493379 AKT3Q9Y243 479 aa7.43□□□□□ -1.22
VPS52-219ENST00000493379 DSPP15924 2871 aaKnown RBP7.42□□□□□ -1.22
VPS52-219ENST00000493379 INPPL1O15357 1258 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 SPINT1O43278 529 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 USO1O60763 962 aaKnown RBP7.42□□□□□ -1.22
VPS52-219ENST00000493379 GJB5O95377 273 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 EOMESO95936 686 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 LINC00271P0C7V0 271 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 MAPTP10636 758 aaKnown RBP7.42□□□□□ -1.22
VPS52-219ENST00000493379 ANP32AP39687 249 aaKnown RBP7.42□□□□□ -1.22
VPS52-219ENST00000493379 TXLNAP40222 546 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 EFNA5P52803 228 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 MBTD1Q05BQ5 628 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 TMEM62Q0P6H9 643 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 TFDP1Q14186 410 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 PPP2R5AQ15172 486 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 C4orf17Q53FE4 359 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 SPECC1Q5M775 1068 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 RRAGBQ5VZM2 374 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.42□□□□□ -1.22
VPS52-219ENST00000493379 SLC24A5Q71RS6 500 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 TMCO2Q7Z6W1 182 aaPredicted RBP7.42□□□□□ -1.22
VPS52-219ENST00000493379 MRPL10Q7Z7H8 261 aaKnown RBP7.42□□□□□ -1.22
VPS52-219ENST00000493379 KSR1Q8IVT5 923 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 HERC6Q8IVU3 1022 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 ELOA2Q8IYF1 753 aaPredicted RBP7.42□□□□□ -1.22
VPS52-219ENST00000493379 IQUBQ8NA54 791 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 RNF149Q8NC42 400 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 BSNDQ8WZ55 320 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 LARP4BQ92615 738 aaKnown RBP7.42□□□□□ -1.22
VPS52-219ENST00000493379 DNAJC19Q96DA6 116 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 IFT43Q96FT9 208 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 DMRTB1Q96MA1 342 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 DRC1Q96MC2 740 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 IPO9Q96P70 1041 aaKnown RBP7.42□□□□□ -1.22
VPS52-219ENST00000493379 RAD9AQ99638 391 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 HNRNPABQ99729 332 aaKnown RBP7.42□□□□□ -1.22
VPS52-219ENST00000493379 PYM1Q9BRP8 204 aaKnown RBP7.42□□□□□ -1.22
VPS52-219ENST00000493379 RUSC1Q9BVN2 902 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 CCDC113Q9H0I3 377 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 C2orf40Q9H1Z8 148 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 MAGEF1Q9HAY2 307 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 GPRC5CQ9NQ84 441 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 AGPAT5Q9NUQ2 364 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 CHMP5Q9NZZ3 219 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 USP25Q9UHP3 1055 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 PHLPP2Q6ZVD8 1323 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 RALGAPA2Q2PPJ7 1873 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 EVPLQ92817 2033 aa7.42□□□□□ -1.22
VPS52-219ENST00000493379 COL4A3Q01955 1670 aa7.41□□□□□ -1.22
VPS52-219ENST00000493379 SIP14410 1827 aa7.41□□□□□ -1.22
VPS52-219ENST00000493379 MYO18BQ8IUG5 2567 aa7.41□□□□□ -1.22
VPS52-219ENST00000493379 TANC1Q9C0D5 1861 aa7.41□□□□□ -1.22
VPS52-219ENST00000493379 TTC3P53804 2025 aa7.41□□□□□ -1.22
VPS52-219ENST00000493379 MYMKA6NI61 221 aa7.41□□□□□ -1.22
VPS52-219ENST00000493379 ACKR2O00590 384 aa7.41□□□□□ -1.22
VPS52-219ENST00000493379 HIP1RO75146 1068 aa7.41□□□□□ -1.22
VPS52-219ENST00000493379 DGKIO75912 1065 aa7.41□□□□□ -1.22
VPS52-219ENST00000493379 AMHP03971 560 aa7.41□□□□□ -1.22
VPS52-219ENST00000493379 SLFN14P0C7P3 912 aa7.41□□□□□ -1.22
VPS52-219ENST00000493379 SRGAP2CP0DJJ0 459 aa7.41□□□□□ -1.22
VPS52-219ENST00000493379 PLS3P13797 630 aa7.41□□□□□ -1.22
VPS52-219ENST00000493379 SFPQP23246 707 aaKnown RBP eCLIP7.41□□□□□ -1.22
VPS52-219ENST00000493379 VAMP1P23763 118 aa7.41□□□□□ -1.22
VPS52-219ENST00000493379 ABCD1P33897 745 aa7.41□□□□□ -1.22
VPS52-219ENST00000493379 PHKA2P46019 1235 aa7.41□□□□□ -1.22
VPS52-219ENST00000493379 PLA2G4AP47712 749 aa7.41□□□□□ -1.22
VPS52-219ENST00000493379 NPTX2P47972 431 aa7.41□□□□□ -1.22
VPS52-219ENST00000493379 ME1P48163 572 aa7.41□□□□□ -1.22
VPS52-219ENST00000493379 SARSP49591 514 aaKnown RBP7.41□□□□□ -1.22
VPS52-219ENST00000493379 DEFB103AP81534 67 aa7.41□□□□□ -1.22
VPS52-219ENST00000493379 DLX2Q07687 328 aaPredicted RBP7.41□□□□□ -1.22
VPS52-219ENST00000493379 EHHADHQ08426 723 aa7.41□□□□□ -1.22
VPS52-219ENST00000493379 PAK2Q13177 524 aa7.41□□□□□ -1.22
VPS52-219ENST00000493379 SMAD2Q15796 467 aaKnown RBP7.41□□□□□ -1.22
VPS52-219ENST00000493379 UBXN11Q5T124 520 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms