RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 ANKRD1Q15327 319 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 PRSS36Q5K4E3 855 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 ATF7IP2Q5U623 682 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 PADI6Q6TGC4 694 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 PDZD4Q76G19 769 aaPredicted RBP12.1□□□□□ -0.47
SND1-215ENST00000492772 CATSPER3Q86XQ3 398 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 TCEAL8Q8IYN2 117 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 ZNF687Q8N1G0 1237 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 ELMOD1Q8N336 334 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 CELF5Q8N6W0 485 aaKnown RBP12.1□□□□□ -0.47
SND1-215ENST00000492772 C3orf58Q8NDZ4 430 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 NETO1Q8TDF5 533 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 DEPDC1BQ8WUY9 529 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 IFT74Q96LB3 600 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 CORO1BQ9BR76 489 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 POLR3CQ9BUI4 534 aaPredicted RBP12.1□□□□□ -0.47
SND1-215ENST00000492772 TRMT61BQ9BVS5 477 aaKnown RBP12.1□□□□□ -0.47
SND1-215ENST00000492772 TRPV5Q9NQA5 729 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 TOPORSQ9NS56 1045 aaPredicted RBP12.1□□□□□ -0.47
SND1-215ENST00000492772 SLC38A7Q9NVC3 462 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 TPCN1Q9ULQ1 816 aa12.1□□□□□ -0.47
SND1-215ENST00000492772 PDCD11Q14690 1871 aaKnown RBP12.09□□□□□ -0.47
SND1-215ENST00000492772 WDR27A2RRH5 827 aa12.09□□□□□ -0.47
SND1-215ENST00000492772 SHISA7A6NL88 538 aa12.09□□□□□ -0.47
SND1-215ENST00000492772 H7C4K7 107 aa12.09□□□□□ -0.47
SND1-215ENST00000492772 I3L4J1 428 aa12.09□□□□□ -0.47
SND1-215ENST00000492772 SYN3O14994 580 aa12.09□□□□□ -0.47
SND1-215ENST00000492772 MED24O75448 989 aa12.09□□□□□ -0.47
SND1-215ENST00000492772 ATF2P15336 505 aa12.09□□□□□ -0.47
SND1-215ENST00000492772 BRCC3P46736 316 aa12.09□□□□□ -0.47
SND1-215ENST00000492772 TRIM29Q14134 588 aa12.09□□□□□ -0.47
SND1-215ENST00000492772 FAM78AQ5JUQ0 283 aa12.09□□□□□ -0.47
SND1-215ENST00000492772 CYP4A22Q5TCH4 519 aa12.09□□□□□ -0.47
SND1-215ENST00000492772 TPGS2Q68CL5 300 aa12.09□□□□□ -0.47
SND1-215ENST00000492772 CD300LGQ6UXG3 332 aa12.09□□□□□ -0.47
SND1-215ENST00000492772 DIS3L2Q8IYB7 885 aaKnown RBP12.09□□□□□ -0.47
SND1-215ENST00000492772 LEMD2Q8NC56 503 aa12.09□□□□□ -0.47
SND1-215ENST00000492772 KIFAP3Q92845 792 aa12.09□□□□□ -0.47
SND1-215ENST00000492772 SMARCD2Q92925 531 aa12.09□□□□□ -0.47
SND1-215ENST00000492772 MSANTD3Q96H12 275 aa12.09□□□□□ -0.47
SND1-215ENST00000492772 ASB16Q96NS5 453 aa12.09□□□□□ -0.47
SND1-215ENST00000492772 CCDC94Q9BW85 323 aaPredicted RBP12.09□□□□□ -0.47
SND1-215ENST00000492772 GOLGA2P5Q9HBQ8 144 aa12.09□□□□□ -0.47
SND1-215ENST00000492772 PARD6AQ9NPB6 346 aa12.09□□□□□ -0.47
SND1-215ENST00000492772 INSL5Q9Y5Q6 135 aa12.09□□□□□ -0.47
SND1-215ENST00000492772 PHLPP2Q6ZVD8 1323 aa12.09□□□□□ -0.47
SND1-215ENST00000492772 SPTBN2O15020 2390 aa12.08□□□□□ -0.47
SND1-215ENST00000492772 SMIM28A0A1B0GU29 152 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 DCDC2BA2VCK2 349 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 BTBD18B2RXH4 712 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 PODXLO00592 558 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 WNT7AO00755 349 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 KRT37O76014 449 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 RETP07949 1114 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 ADRB1P08588 477 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 FDPSP14324 419 aaKnown RBP12.08□□□□□ -0.48
SND1-215ENST00000492772 PSMC3P17980 439 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 MUTP22033 750 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 IGFBP6P24592 240 aaPredicted RBP12.08□□□□□ -0.48
SND1-215ENST00000492772 RPA1P27694 616 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 GRM5P41594 1212 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 SPEM2Q0P670 501 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 ORC2Q13416 577 aaPredicted RBP12.08□□□□□ -0.48
SND1-215ENST00000492772 HAUS3Q68CZ6 603 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 IQCEQ6IPM2 695 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 C1orf228Q6PIY5 440 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 POTEHQ6S545 545 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 MAP4K3Q8IVH8 894 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 FAM3CQ92520 227 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 TCEAL4Q96EI5 215 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 KIFC3Q9BVG8 833 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 TMEM60Q9H2L4 133 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 CYP4F11Q9HBI6 524 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 ZNF334Q9HCZ1 680 aaPredicted RBP12.08□□□□□ -0.48
SND1-215ENST00000492772 MAFFQ9ULX9 164 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 TNFSF13BQ9Y275 285 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 USP20Q9Y2K6 914 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 PIAS3Q9Y6X2 628 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 CITO14578 2027 aa12.08□□□□□ -0.48
SND1-215ENST00000492772 SLC30A4O14863 429 aa12.07□□□□□ -0.48
SND1-215ENST00000492772 FOXD2O60548 495 aaPredicted RBP12.07□□□□□ -0.48
SND1-215ENST00000492772 DTNBO60941 627 aa12.07□□□□□ -0.48
SND1-215ENST00000492772 GDI1P31150 447 aa12.07□□□□□ -0.48
SND1-215ENST00000492772 MCM7P33993 719 aa12.07□□□□□ -0.48
SND1-215ENST00000492772 MLLT6P55198 1093 aaPredicted RBP12.07□□□□□ -0.48
SND1-215ENST00000492772 ARPP19P56211 112 aa12.07□□□□□ -0.48
SND1-215ENST00000492772 SOX4Q06945 474 aaPredicted RBP12.07□□□□□ -0.48
SND1-215ENST00000492772 LRRC32Q14392 662 aa12.07□□□□□ -0.48
SND1-215ENST00000492772 ZNF568Q3ZCX4 644 aa12.07□□□□□ -0.48
SND1-215ENST00000492772 XKR4Q5GH76 650 aa12.07□□□□□ -0.48
SND1-215ENST00000492772 NT5DC1Q5TFE4 455 aa12.07□□□□□ -0.48
SND1-215ENST00000492772 ZNF280DQ6N043 979 aa12.07□□□□□ -0.48
SND1-215ENST00000492772 VITQ6UXI7 678 aa12.07□□□□□ -0.48
SND1-215ENST00000492772 PRR23BQ6ZRT6 265 aa12.07□□□□□ -0.48
SND1-215ENST00000492772 GTF3C6Q969F1 213 aa12.07□□□□□ -0.48
SND1-215ENST00000492772 E2F7Q96AV8 911 aa12.07□□□□□ -0.48
SND1-215ENST00000492772 CDT1Q9H211 546 aa12.07□□□□□ -0.48
SND1-215ENST00000492772 LMAN1LQ9HAT1 526 aa12.07□□□□□ -0.48
SND1-215ENST00000492772 TRPV4Q9HBA0 871 aa12.07□□□□□ -0.48
SND1-215ENST00000492772 ASAH2Q9NR71 780 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms